RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 CA4P22748 312 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 ASPAP45381 313 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 KPNA1P52294 538 aaPredicted RBP9.38□□□□□ -0.91
SF3B2-216ENST00000534765 PABPC1LQ4VXU2 614 aaKnown RBP9.38□□□□□ -0.91
SF3B2-216ENST00000534765 RABGAP1LQ5R372 815 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 DNAJB3Q8WWF6 145 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 ZBED2Q9BTP6 218 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 THTPAQ9BU02 230 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 ABHD16BQ9H3Z7 469 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 SLCO1B3Q9NPD5 702 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 TUBA8Q9NY65 449 aaPredicted RBP9.38□□□□□ -0.91
SF3B2-216ENST00000534765 VCANP13611 3396 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 PCP4L1A6NKN8 68 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 TBX10O75333 385 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 F2P00734 622 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 APOEP02649 317 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 GNAZP19086 355 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 CD58P19256 250 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 CDK7P50613 346 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 ITIH3Q06033 890 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 SMUG1Q53HV7 270 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 NT5DC3Q86UY8 548 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 DDHD1Q8NEL9 900 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 SPOCK2Q92563 424 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 C18orf25Q96B23 403 aaPredicted RBP9.38□□□□□ -0.91
SF3B2-216ENST00000534765 LIN28AQ9H9Z2 209 aaKnown RBP9.38□□□□□ -0.91
SF3B2-216ENST00000534765 GOLGA2P5Q9HBQ8 144 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 DKK3Q9UBP4 350 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 IKBKGQ9Y6K9 419 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.38□□□□□ -0.91
SF3B2-216ENST00000534765 PDE4DIPQ5VU43 2346 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 SLC15A5A6NIM6 579 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 ACKR2O00590 384 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 PMM2O15305 246 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 UNGP13051 313 aaPredicted RBP9.37□□□□□ -0.91
SF3B2-216ENST00000534765 KRT10P13645 584 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 CYP3A5P20815 502 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 HDAC4P56524 1084 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 GLRA4Q5JXX5 417 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 ZNF618Q5T7W0 954 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 SLFN11Q7Z7L1 901 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 BRSK2Q8IWQ3 736 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 DQX1Q8TE96 717 aaKnown RBP9.37□□□□□ -0.91
SF3B2-216ENST00000534765 CCDC77Q9BR77 488 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 CARD8Q9Y2G2 431 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 N6AMT1Q9Y5N5 214 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 RASA4BC9J798 803 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 RASA4O43374 803 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 GMNNO75496 209 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 OXSR1O95747 527 aaPredicted RBP9.37□□□□□ -0.91
SF3B2-216ENST00000534765 AKAP5P24588 427 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 MAPK4P31152 587 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 ATICP31939 592 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 CCNA1P78396 465 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 PTP4A2Q12974 167 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 ZNF568Q3ZCX4 644 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 WASHC2DQ5SRD0 308 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 RNF19BQ6ZMZ0 732 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 PRR23CQ6ZRP0 262 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 STKLD1Q8NE28 680 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 SH3TC2Q8TF17 1288 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 ATXN2LQ8WWM7 1075 aaKnown RBP9.37□□□□□ -0.91
SF3B2-216ENST00000534765 CNBD2Q96M20 576 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 CGRRF1Q99675 332 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 NXF3Q9H4D5 531 aaKnown RBP9.37□□□□□ -0.91
SF3B2-216ENST00000534765 CROTQ9UKG9 612 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 MTUS1Q9ULD2 1270 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 MROH7Q68CQ1 1323 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 ARHGAP10A1A4S6 786 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 TMEM88BA6NKF7 163 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 ENO1P06733 434 aaKnown RBP9.37□□□□□ -0.91
SF3B2-216ENST00000534765 RGS2P41220 211 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 PIK3CAP42336 1068 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 AP2B1P63010 937 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 PLCB3Q01970 1234 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 NCOA4Q13772 614 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 VPS36Q86VN1 386 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 TTC30AQ86WT1 665 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 C4orf33Q8N1A6 199 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.37□□□□□ -0.91
SF3B2-216ENST00000534765 RILPQ96NA2 401 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 TRPC7Q9HCX4 862 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 TBC1D23Q9NUY8 699 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 PRKAG3Q9UGI9 489 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 AMFRQ9UKV5 643 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 ABT1Q9ULW3 272 aaKnown RBP9.37□□□□□ -0.91
SF3B2-216ENST00000534765 EXOC7Q9UPT5 735 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 GMEB1Q9Y692 573 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 H3BRJ5 948 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 HAS3O00219 553 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 CASQ2O14958 399 aaPredicted RBP9.37□□□□□ -0.91
SF3B2-216ENST00000534765 FOXD2O60548 495 aaPredicted RBP9.37□□□□□ -0.91
SF3B2-216ENST00000534765 STAG3L1P0CL83 205 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 ZNF252P-AS1Q0IIN9 211 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 MAPK6Q16659 721 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 TMEM270Q6UE05 265 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 CXCL17Q6UXB2 119 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 MAML1Q92585 1016 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 PIWIL1Q96J94 861 aaKnown RBP9.37□□□□□ -0.91
SF3B2-216ENST00000534765 PABPC3Q9H361 631 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms