RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 WDR35Q9P2L0 1181 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 ARMCX3Q9UH62 379 aaPredicted RBP9.37□□□□□ -0.91
COPB1-211ENST00000534234 CIZ1Q9ULV3 898 aaPredicted RBP9.37□□□□□ -0.91
COPB1-211ENST00000534234 BCLAF3A2AJT9 711 aaKnown RBP9.37□□□□□ -0.91
COPB1-211ENST00000534234 TRIM49BA6NDI0 452 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 NEDD8-MDP1E9PL57 170 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 MAP3K13O43283 966 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 CAVIN2O95810 425 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 TYRP14679 529 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 LIMK1P53667 647 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 COG7P83436 770 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 EFEMP1Q12805 493 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 CUL2Q13617 745 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 PPM1JQ5JR12 505 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 PMS2CLQ68D20 193 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 ARHGAP17Q68EM7 881 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 GRAMD4Q6IC98 578 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 TRMT11Q7Z4G4 463 aaKnown RBP9.37□□□□□ -0.91
COPB1-211ENST00000534234 PIGZQ86VD9 579 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 ZC3H3Q8IXZ2 948 aaKnown RBP9.37□□□□□ -0.91
COPB1-211ENST00000534234 PGBD3Q8N328 593 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 TERB1Q8NA31 727 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 OLIG1Q8TAK6 271 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 HMGB4Q8WW32 186 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 RLN3Q8WXF3 142 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 SLC35C1Q96A29 364 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 CDK5RAP1Q96SZ6 601 aaKnown RBP9.37□□□□□ -0.91
COPB1-211ENST00000534234 DNAJC17Q9NVM6 304 aaKnown RBP9.37□□□□□ -0.91
COPB1-211ENST00000534234 BCCIPQ9P287 314 aaKnown RBP eCLIP9.37□□□□□ -0.91
COPB1-211ENST00000534234 STARD13Q9Y3M8 1113 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 TCRBV21S2A2A0A5A6 115 aa9.36□□□□□ -0.91
COPB1-211ENST00000534234 PSMA7O14818 248 aa9.36□□□□□ -0.91
COPB1-211ENST00000534234 TM4SF5O14894 197 aa9.36□□□□□ -0.91
COPB1-211ENST00000534234 CACNG3O60359 315 aa9.36□□□□□ -0.91
COPB1-211ENST00000534234 OBSL1O75147 1896 aa9.36□□□□□ -0.91
COPB1-211ENST00000534234 STC2O76061 302 aa9.36□□□□□ -0.91
COPB1-211ENST00000534234 KLKB1P03952 638 aa9.36□□□□□ -0.91
COPB1-211ENST00000534234 BCKDHBP21953 392 aa9.36□□□□□ -0.91
COPB1-211ENST00000534234 NTSR1P30989 418 aa9.36□□□□□ -0.91
COPB1-211ENST00000534234 P2RY2P41231 377 aa9.36□□□□□ -0.91
COPB1-211ENST00000534234 WASP42768 502 aa9.36□□□□□ -0.91
COPB1-211ENST00000534234 DHPSP49366 369 aaPredicted RBP9.36□□□□□ -0.91
COPB1-211ENST00000534234 TKTL1P51854 596 aa9.36□□□□□ -0.91
COPB1-211ENST00000534234 LRMPQ12912 555 aa9.36□□□□□ -0.91
COPB1-211ENST00000534234 STIM1Q13586 685 aa9.36□□□□□ -0.91
COPB1-211ENST00000534234 BYSLQ13895 437 aaKnown RBP9.36□□□□□ -0.91
COPB1-211ENST00000534234 RAB41Q5JT25 222 aa9.36□□□□□ -0.91
COPB1-211ENST00000534234 STPG1Q5TH74 334 aa9.36□□□□□ -0.91
COPB1-211ENST00000534234 TCEAL6Q6IPX3 200 aa9.36□□□□□ -0.91
COPB1-211ENST00000534234 SDE2Q6IQ49 451 aa9.36□□□□□ -0.91
COPB1-211ENST00000534234 Q6ZNB5 142 aa9.36□□□□□ -0.91
COPB1-211ENST00000534234 ELOA2Q8IYF1 753 aaPredicted RBP9.36□□□□□ -0.91
COPB1-211ENST00000534234 ARHGAP18Q8N392 663 aa9.36□□□□□ -0.91
COPB1-211ENST00000534234 FRMD1Q8N878 549 aa9.36□□□□□ -0.91
COPB1-211ENST00000534234 DDX1Q92499 740 aaKnown RBP9.36□□□□□ -0.91
COPB1-211ENST00000534234 BHMTQ93088 406 aa9.36□□□□□ -0.91
COPB1-211ENST00000534234 TCEAL3Q969E4 200 aa9.36□□□□□ -0.91
COPB1-211ENST00000534234 DHTKD1Q96HY7 919 aaPredicted RBP9.36□□□□□ -0.91
COPB1-211ENST00000534234 METTL14Q9HCE5 456 aaKnown RBP9.36□□□□□ -0.91
COPB1-211ENST00000534234 PLK2Q9NYY3 685 aa9.36□□□□□ -0.91
COPB1-211ENST00000534234 MARK1Q9P0L2 795 aa9.36□□□□□ -0.91
COPB1-211ENST00000534234 RASAL2Q9UJF2 1139 aa9.36□□□□□ -0.91
COPB1-211ENST00000534234 HCN2Q9UL51 889 aa9.36□□□□□ -0.91
COPB1-211ENST00000534234 ZNF510Q9Y2H8 683 aa9.36□□□□□ -0.91
COPB1-211ENST00000534234 DENND4CQ5VZ89 1909 aa9.36□□□□□ -0.91
COPB1-211ENST00000534234 PRRT4C9JH25 899 aa9.35□□□□□ -0.91
COPB1-211ENST00000534234 TULP2O00295 520 aa9.35□□□□□ -0.91
COPB1-211ENST00000534234 ZBTB24O43167 697 aaPredicted RBP9.35□□□□□ -0.91
COPB1-211ENST00000534234 ZBED1O96006 694 aa9.35□□□□□ -0.91
COPB1-211ENST00000534234 HMBSP08397 361 aa9.35□□□□□ -0.91
COPB1-211ENST00000534234 CISD3P0C7P0 127 aa9.35□□□□□ -0.91
COPB1-211ENST00000534234 HOXB2P14652 356 aa9.35□□□□□ -0.91
COPB1-211ENST00000534234 CD19P15391 556 aa9.35□□□□□ -0.91
COPB1-211ENST00000534234 CD44P16070 742 aaKnown RBP9.35□□□□□ -0.91
COPB1-211ENST00000534234 CHKAP35790 457 aa9.35□□□□□ -0.91
COPB1-211ENST00000534234 DGKGP49619 791 aa9.35□□□□□ -0.91
COPB1-211ENST00000534234 YWHAGP61981 247 aaKnown RBP eCLIP9.35□□□□□ -0.91
COPB1-211ENST00000534234 YWHAEP62258 255 aaKnown RBP9.35□□□□□ -0.91
COPB1-211ENST00000534234 PDE4CQ08493 712 aa9.35□□□□□ -0.91
COPB1-211ENST00000534234 SGO2Q562F6 1265 aa9.35□□□□□ -0.91
COPB1-211ENST00000534234 RNF43Q68DV7 783 aa9.35□□□□□ -0.91
COPB1-211ENST00000534234 PM20D1Q6GTS8 502 aa9.35□□□□□ -0.91
COPB1-211ENST00000534234 TOGARAM2Q6ZUX3 1019 aa9.35□□□□□ -0.91
COPB1-211ENST00000534234 RSRC2Q7L4I2 434 aaKnown RBP9.35□□□□□ -0.91
COPB1-211ENST00000534234 LPCAT2Q7L5N7 544 aa9.35□□□□□ -0.91
COPB1-211ENST00000534234 CHPFQ8IZ52 775 aa9.35□□□□□ -0.91
COPB1-211ENST00000534234 PIGKQ92643 395 aa9.35□□□□□ -0.91
COPB1-211ENST00000534234 SPACA7Q96KW9 195 aa9.35□□□□□ -0.91
COPB1-211ENST00000534234 ACOX2Q99424 681 aa9.35□□□□□ -0.91
COPB1-211ENST00000534234 DCLK3Q9C098 648 aa9.35□□□□□ -0.91
COPB1-211ENST00000534234 LRRC4Q9HBW1 653 aa9.35□□□□□ -0.91
COPB1-211ENST00000534234 MARCH2Q9P0N8 246 aa9.35□□□□□ -0.91
COPB1-211ENST00000534234 HESX1Q9UBX0 185 aa9.35□□□□□ -0.91
COPB1-211ENST00000534234 MAN1B1Q9UKM7 699 aa9.35□□□□□ -0.91
COPB1-211ENST00000534234 TSPAN16Q9UKR8 245 aa9.35□□□□□ -0.91
COPB1-211ENST00000534234 KIAA1257Q9ULG3 409 aa9.35□□□□□ -0.91
COPB1-211ENST00000534234 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.34□□□□□ -0.91
COPB1-211ENST00000534234 SLC12A8A0AV02 714 aa9.34□□□□□ -0.91
COPB1-211ENST00000534234 XPO1O14980 1071 aaKnown RBP9.34□□□□□ -0.91
COPB1-211ENST00000534234 KHNYNO15037 678 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms