RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 GDF15Q99988 308 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 PDGFCQ9NRA1 345 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 TMOD4Q9NZQ9 345 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 PHTF1Q9UMS5 762 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 MAN2B2Q9Y2E5 1009 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 TNFRSF18Q9Y5U5 241 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 ZNF804BA4D1E1 1349 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 WDR17Q8IZU2 1322 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 SMIM35A0A1B0GVV1 85 aa4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 WDR91A4D1P6 747 aa4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 INO80B-WBP1J3KQ70 363 aa4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 CCNT2O60583 730 aaKnown RBP4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 CBFA2T3O75081 653 aa4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 FGF18O76093 207 aa4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 NDST3O95803 873 aa4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 HARSP12081 509 aaKnown RBP4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 SLC5A2P31639 672 aa4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 PBX1P40424 430 aa4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 AK2P54819 239 aa4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 TXNL4AP83876 142 aaKnown RBP4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 PICALMQ13492 652 aa4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 KCNB1Q14721 858 aa4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 AASDHQ4L235 1098 aaPredicted RBP4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 AWAT1Q58HT5 328 aa4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 CCDC181Q5TID7 509 aa4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 RAP1GAP2Q684P5 730 aa4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 IL31Q6EBC2 164 aa4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 CCSAPQ6IQ19 270 aaPredicted RBP4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 ZNF813Q6ZN06 617 aa4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 KRT73Q86Y46 540 aa4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 P3H2Q8IVL5 708 aa4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 TXLNBQ8N3L3 684 aa4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 OR2C3Q8N628 320 aa4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 FAM71DQ8N9W8 422 aa4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 PRR11Q96HE9 360 aaPredicted RBP4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 SNX27Q96L92 541 aa4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 HS6ST2Q96MM7 605 aa4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 EFHD1Q9BUP0 239 aa4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 EIF2AQ9BY44 585 aaKnown RBP4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 PCGF6Q9BYE7 350 aa4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 PCDHAC1Q9H158 963 aa4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 USP29Q9HBJ7 922 aa4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 ZNF70Q9UC06 446 aaPredicted RBP4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 ZMYND8Q9ULU4 1186 aaPredicted RBP4.66□□□□□ -1.66
ATPAF1-211ENST00000534216 CLIC1O00299 241 aa4.65□□□□□ -1.67
ATPAF1-211ENST00000534216 PRAMEF2O60811 474 aa4.65□□□□□ -1.67
ATPAF1-211ENST00000534216 IDEP14735 1019 aa4.65□□□□□ -1.67
ATPAF1-211ENST00000534216 EGR1P18146 543 aa4.65□□□□□ -1.67
ATPAF1-211ENST00000534216 SFPQP23246 707 aaKnown RBP eCLIP4.65□□□□□ -1.67
ATPAF1-211ENST00000534216 NEK3P51956 506 aa4.65□□□□□ -1.67
ATPAF1-211ENST00000534216 DNASE1L3Q13609 305 aa4.65□□□□□ -1.67
ATPAF1-211ENST00000534216 MFSD13AQ14CX5 517 aa4.65□□□□□ -1.67
ATPAF1-211ENST00000534216 SLC5A9Q2M3M2 681 aa4.65□□□□□ -1.67
ATPAF1-211ENST00000534216 SLC35G1Q2M3R5 365 aa4.65□□□□□ -1.67
ATPAF1-211ENST00000534216 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.65□□□□□ -1.67
ATPAF1-211ENST00000534216 IZUMO3Q5VZ72 239 aa4.65□□□□□ -1.67
ATPAF1-211ENST00000534216 MIS18BP1Q6P0N0 1132 aa4.65□□□□□ -1.67
ATPAF1-211ENST00000534216 VSTM1Q6UX27 236 aa4.65□□□□□ -1.67
ATPAF1-211ENST00000534216 RANBP10Q6VN20 620 aa4.65□□□□□ -1.67
ATPAF1-211ENST00000534216 CCDC138Q96M89 665 aa4.65□□□□□ -1.67
ATPAF1-211ENST00000534216 CINPQ9BW66 212 aaPredicted RBP4.65□□□□□ -1.67
ATPAF1-211ENST00000534216 SLC29A3Q9BZD2 475 aa4.65□□□□□ -1.67
ATPAF1-211ENST00000534216 NRIP3Q9NQ35 241 aa4.65□□□□□ -1.67
ATPAF1-211ENST00000534216 VPS45Q9NRW7 570 aa4.65□□□□□ -1.67
ATPAF1-211ENST00000534216 FZD4Q9ULV1 537 aa4.65□□□□□ -1.67
ATPAF1-211ENST00000534216 SCAF8Q9UPN6 1271 aaKnown RBP4.65□□□□□ -1.67
ATPAF1-211ENST00000534216 BTBD3Q9Y2F9 522 aa4.65□□□□□ -1.67
ATPAF1-211ENST00000534216 CYP2D7A0A087X1C5 515 aa4.64□□□□□ -1.67
ATPAF1-211ENST00000534216 OR2W5A6NFC9 320 aa4.64□□□□□ -1.67
ATPAF1-211ENST00000534216 FYB1O15117 783 aa4.64□□□□□ -1.67
ATPAF1-211ENST00000534216 BCAR3O75815 825 aa4.64□□□□□ -1.67
ATPAF1-211ENST00000534216 MBPP02686 304 aaPredicted RBP4.64□□□□□ -1.67
ATPAF1-211ENST00000534216 TMIGD3P0DMS9 266 aaPredicted RBP4.64□□□□□ -1.67
ATPAF1-211ENST00000534216 GALNSP34059 522 aa4.64□□□□□ -1.67
ATPAF1-211ENST00000534216 ARHGAP25P42331 645 aa4.64□□□□□ -1.67
ATPAF1-211ENST00000534216 DGKQP52824 942 aa4.64□□□□□ -1.67
ATPAF1-211ENST00000534216 CCDC15Q0P6D6 951 aa4.64□□□□□ -1.67
ATPAF1-211ENST00000534216 ATP1A4Q13733 1029 aa4.64□□□□□ -1.67
ATPAF1-211ENST00000534216 KCNJ12Q14500 433 aa4.64□□□□□ -1.67
ATPAF1-211ENST00000534216 ZNF268Q14587 947 aaPredicted RBP4.64□□□□□ -1.67
ATPAF1-211ENST00000534216 DAZAP2Q15038 168 aaPredicted RBP4.64□□□□□ -1.67
ATPAF1-211ENST00000534216 MORN5Q5VZ52 161 aa4.64□□□□□ -1.67
ATPAF1-211ENST00000534216 SLC2A7Q6PXP3 512 aa4.64□□□□□ -1.67
ATPAF1-211ENST00000534216 C1QL2Q7Z5L3 287 aa4.64□□□□□ -1.67
ATPAF1-211ENST00000534216 CNGA4Q8IV77 575 aa4.64□□□□□ -1.67
ATPAF1-211ENST00000534216 GLIS1Q8NBF1 620 aa4.64□□□□□ -1.67
ATPAF1-211ENST00000534216 HIC2Q96JB3 615 aa4.64□□□□□ -1.67
ATPAF1-211ENST00000534216 ZNF778Q96MU6 729 aa4.64□□□□□ -1.67
ATPAF1-211ENST00000534216 C1QTNF7Q9BXJ2 289 aa4.64□□□□□ -1.67
ATPAF1-211ENST00000534216 PRSS22Q9GZN4 317 aa4.64□□□□□ -1.67
ATPAF1-211ENST00000534216 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.64□□□□□ -1.67
ATPAF1-211ENST00000534216 SAP30LQ9HAJ7 183 aa4.64□□□□□ -1.67
ATPAF1-211ENST00000534216 TMEM8AQ9HCN3 771 aa4.64□□□□□ -1.67
ATPAF1-211ENST00000534216 RGL1Q9NZL6 768 aa4.64□□□□□ -1.67
ATPAF1-211ENST00000534216 SEMA5BQ9P283 1151 aa4.64□□□□□ -1.67
ATPAF1-211ENST00000534216 KLHL13Q9P2N7 655 aa4.64□□□□□ -1.67
ATPAF1-211ENST00000534216 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.63□□□□□ -1.67
ATPAF1-211ENST00000534216 FAM234BA2RU67 622 aa4.63□□□□□ -1.67
ATPAF1-211ENST00000534216 KCNU1A8MYU2 1149 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms