RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 BIRC3Q13489 604 aa15.78■□□□□ 0.12
CTSB-230ENST00000534149 SLC39A14Q15043 492 aa15.78■□□□□ 0.12
CTSB-230ENST00000534149 WDR45BQ5MNZ6 344 aa15.78■□□□□ 0.12
CTSB-230ENST00000534149 CCNI2Q6ZMN8 369 aaPredicted RBP15.78■□□□□ 0.12
CTSB-230ENST00000534149 ACOT1Q86TX2 421 aa15.78■□□□□ 0.12
CTSB-230ENST00000534149 PDZD3Q86UT5 571 aa15.78■□□□□ 0.12
CTSB-230ENST00000534149 MDM1Q8TC05 714 aa15.78■□□□□ 0.12
CTSB-230ENST00000534149 TLR8Q9NR97 1041 aaKnown RBP15.78■□□□□ 0.12
CTSB-230ENST00000534149 KBTBD4Q9NVX7 518 aa15.78■□□□□ 0.12
CTSB-230ENST00000534149 PLK2Q9NYY3 685 aa15.78■□□□□ 0.12
CTSB-230ENST00000534149 WDR35Q9P2L0 1181 aa15.78■□□□□ 0.12
CTSB-230ENST00000534149 LSM7Q9UK45 103 aaKnown RBP15.78■□□□□ 0.12
CTSB-230ENST00000534149 MEI4A8MW99 385 aa15.77■□□□□ 0.12
CTSB-230ENST00000534149 MDM4O15151 490 aa15.77■□□□□ 0.12
CTSB-230ENST00000534149 CISD3P0C7P0 127 aa15.77■□□□□ 0.12
CTSB-230ENST00000534149 PDCP20941 246 aa15.77■□□□□ 0.12
CTSB-230ENST00000534149 MAP3K7CLP57077 242 aa15.77■□□□□ 0.12
CTSB-230ENST00000534149 E2F4Q16254 413 aa15.77■□□□□ 0.12
CTSB-230ENST00000534149 SOWAHCQ53LP3 525 aaPredicted RBP15.77■□□□□ 0.12
CTSB-230ENST00000534149 ZNF667Q5HYK9 610 aa15.77■□□□□ 0.12
CTSB-230ENST00000534149 SLCO6A1Q86UG4 719 aa15.77■□□□□ 0.12
CTSB-230ENST00000534149 ZCCHC9Q8N567 271 aaKnown RBP15.77■□□□□ 0.12
CTSB-230ENST00000534149 PLEKHO2Q8TD55 490 aa15.77■□□□□ 0.12
CTSB-230ENST00000534149 SLC2A14Q8TDB8 520 aa15.77■□□□□ 0.12
CTSB-230ENST00000534149 TOE1Q96GM8 510 aaKnown RBP15.77■□□□□ 0.12
CTSB-230ENST00000534149 LRRC27Q9C0I9 530 aa15.77■□□□□ 0.12
CTSB-230ENST00000534149 FBXO44Q9H4M3 255 aa15.77■□□□□ 0.12
CTSB-230ENST00000534149 VRTNQ9H8Y1 702 aa15.77■□□□□ 0.12
CTSB-230ENST00000534149 IL21RQ9HBE5 538 aa15.77■□□□□ 0.12
CTSB-230ENST00000534149 OSER1Q9NX31 292 aa15.77■□□□□ 0.12
CTSB-230ENST00000534149 HMGXB4Q9UGU5 601 aa15.77■□□□□ 0.12
CTSB-230ENST00000534149 APOBEC2Q9Y235 224 aaKnown RBP15.77■□□□□ 0.12
CTSB-230ENST00000534149 MORC2Q9Y6X9 1032 aaPredicted RBP15.77■□□□□ 0.12
CTSB-230ENST00000534149 KNL1Q8NG31 2342 aa15.77■□□□□ 0.11
CTSB-230ENST00000534149 UBE4BO95155 1302 aa15.76■□□□□ 0.11
CTSB-230ENST00000534149 A0A1B0GTW7 788 aa15.76■□□□□ 0.11
CTSB-230ENST00000534149 GFRA2O00451 464 aa15.76■□□□□ 0.11
CTSB-230ENST00000534149 CYP26A1O43174 497 aa15.76■□□□□ 0.11
CTSB-230ENST00000534149 CBFA2T3O75081 653 aa15.76■□□□□ 0.11
CTSB-230ENST00000534149 NCAM1P13591 858 aa15.76■□□□□ 0.11
CTSB-230ENST00000534149 ATP5C1P36542 298 aaKnown RBP15.76■□□□□ 0.11
CTSB-230ENST00000534149 GOLGA8FQ08AF8 430 aa15.76■□□□□ 0.11
CTSB-230ENST00000534149 GOLGA8DPQ0D2H9 430 aa15.76■□□□□ 0.11
CTSB-230ENST00000534149 CUL4AQ13619 759 aa15.76■□□□□ 0.11
CTSB-230ENST00000534149 NCOA4Q13772 614 aa15.76■□□□□ 0.11
CTSB-230ENST00000534149 FUT11Q495W5 492 aa15.76■□□□□ 0.11
CTSB-230ENST00000534149 GPRIN1Q7Z2K8 1008 aa15.76■□□□□ 0.11
CTSB-230ENST00000534149 DNASE2BQ8WZ79 361 aa15.76■□□□□ 0.11
CTSB-230ENST00000534149 JAKMIP2Q96AA8 810 aa15.76■□□□□ 0.11
CTSB-230ENST00000534149 DHX58Q96C10 678 aa15.76■□□□□ 0.11
CTSB-230ENST00000534149 P2RY11Q96G91 374 aa15.76■□□□□ 0.11
CTSB-230ENST00000534149 GPR174Q9BXC1 333 aa15.76■□□□□ 0.11
CTSB-230ENST00000534149 ZDHHC5Q9C0B5 715 aa15.76■□□□□ 0.11
CTSB-230ENST00000534149 MIR1-1HGQ9H1L0 117 aa15.76■□□□□ 0.11
CTSB-230ENST00000534149 PRDM16Q9HAZ2 1276 aa15.76■□□□□ 0.11
CTSB-230ENST00000534149 CYLDQ9NQC7 956 aa15.76■□□□□ 0.11
CTSB-230ENST00000534149 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.76■□□□□ 0.111e-8■■■■■ 41
CTSB-230ENST00000534149 FAM49BQ9NUQ9 324 aa15.76■□□□□ 0.11
CTSB-230ENST00000534149 WSB2Q9NYS7 404 aaPredicted RBP15.76■□□□□ 0.11
CTSB-230ENST00000534149 USP36Q9P275 1121 aaKnown RBP15.76■□□□□ 0.11
CTSB-230ENST00000534149 NUDT5Q9UKK9 219 aa15.76■□□□□ 0.11
CTSB-230ENST00000534149 PCOLCE2Q9UKZ9 415 aa15.76■□□□□ 0.11
CTSB-230ENST00000534149 STON1Q9Y6Q2 735 aa15.76■□□□□ 0.11
CTSB-230ENST00000534149 GOLGA4Q13439 2230 aaKnown RBP15.76■□□□□ 0.11
CTSB-230ENST00000534149 VNN1O95497 513 aa15.75■□□□□ 0.11
CTSB-230ENST00000534149 SYT1P21579 422 aa15.75■□□□□ 0.11
CTSB-230ENST00000534149 STARD3Q14849 445 aa15.75■□□□□ 0.11
CTSB-230ENST00000534149 GLRX5Q86SX6 157 aa15.75■□□□□ 0.11
CTSB-230ENST00000534149 C12orf29Q8N999 325 aa15.75■□□□□ 0.11
CTSB-230ENST00000534149 SETD7Q8WTS6 366 aaKnown RBP15.75■□□□□ 0.11
CTSB-230ENST00000534149 HNRNPLLQ8WVV9 542 aaKnown RBP15.75■□□□□ 0.11
CTSB-230ENST00000534149 MKRN2Q9H000 416 aaKnown RBP15.75■□□□□ 0.11
CTSB-230ENST00000534149 CSNK1G1Q9HCP0 422 aa15.75■□□□□ 0.11
CTSB-230ENST00000534149 RAXQ9Y2V3 346 aa15.75■□□□□ 0.11
CTSB-230ENST00000534149 GCN1Q92616 2671 aaKnown RBP15.74■□□□□ 0.11
CTSB-230ENST00000534149 CABIN1Q9Y6J0 2220 aa15.74■□□□□ 0.11
CTSB-230ENST00000534149 A0A1W2PQH9 124 aa15.74■□□□□ 0.11
CTSB-230ENST00000534149 LRRIQ3A6PVS8 624 aaPredicted RBP15.74■□□□□ 0.11
CTSB-230ENST00000534149 KCNJ18B7U540 433 aa15.74■□□□□ 0.11
CTSB-230ENST00000534149 EXOC3O60645 756 aa15.74■□□□□ 0.11
CTSB-230ENST00000534149 ADORA2BP29275 332 aa15.74■□□□□ 0.11
CTSB-230ENST00000534149 CASP1P29466 404 aa15.74■□□□□ 0.11
CTSB-230ENST00000534149 NDST1P52848 882 aa15.74■□□□□ 0.11
CTSB-230ENST00000534149 SNRPFP62306 86 aaKnown RBP15.74■□□□□ 0.11
CTSB-230ENST00000534149 AMPD3Q01432 767 aa15.74■□□□□ 0.11
CTSB-230ENST00000534149 DCAF12L1Q5VU92 463 aa15.74■□□□□ 0.11
CTSB-230ENST00000534149 Q6ZNB5 142 aa15.74■□□□□ 0.11
CTSB-230ENST00000534149 CACUL1Q86Y37 369 aa15.74■□□□□ 0.11
CTSB-230ENST00000534149 C12orf56Q8IXR9 622 aa15.74■□□□□ 0.11
CTSB-230ENST00000534149 CUEDC2Q9H467 287 aa15.74■□□□□ 0.11
CTSB-230ENST00000534149 GAREM1Q9H706 876 aa15.74■□□□□ 0.11
CTSB-230ENST00000534149 NMUR1Q9HB89 426 aa15.74■□□□□ 0.11
CTSB-230ENST00000534149 SCML2Q9UQR0 700 aa15.74■□□□□ 0.11
CTSB-230ENST00000534149 FNDC3AQ9Y2H6 1198 aaKnown RBP15.74■□□□□ 0.11
CTSB-230ENST00000534149 NFE2L3Q9Y4A8 694 aa15.74■□□□□ 0.11
CTSB-230ENST00000534149 URB1O60287 2271 aaKnown RBP15.74■□□□□ 0.11
CTSB-230ENST00000534149 CKAP5Q14008 2032 aa15.73■□□□□ 0.11
CTSB-230ENST00000534149 NUMA1Q14980 2115 aa15.73■□□□□ 0.11
CTSB-230ENST00000534149 HHLA1C9JL84 531 aa15.73■□□□□ 0.11
CTSB-230ENST00000534149 CILPO75339 1184 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms