RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 GOLGA8FQ08AF8 430 aa9.78□□□□□ -0.84
PACS1-214ENST00000533811 GOLGA8DPQ0D2H9 430 aa9.78□□□□□ -0.84
PACS1-214ENST00000533811 TRPC3Q13507 836 aa9.78□□□□□ -0.84
PACS1-214ENST00000533811 FUT11Q495W5 492 aa9.78□□□□□ -0.84
PACS1-214ENST00000533811 IL27RAQ6UWB1 636 aa9.78□□□□□ -0.84
PACS1-214ENST00000533811 SCARA5Q6ZMJ2 495 aa9.78□□□□□ -0.84
PACS1-214ENST00000533811 FAM35AQ86V20 835 aa9.78□□□□□ -0.84
PACS1-214ENST00000533811 FAM124AQ86V42 546 aa9.78□□□□□ -0.84
PACS1-214ENST00000533811 GALNT15Q8N3T1 639 aa9.78□□□□□ -0.84
PACS1-214ENST00000533811 DNASE2BQ8WZ79 361 aa9.78□□□□□ -0.84
PACS1-214ENST00000533811 JAKMIP2Q96AA8 810 aa9.78□□□□□ -0.84
PACS1-214ENST00000533811 CCDC127Q96BQ5 260 aa9.78□□□□□ -0.84
PACS1-214ENST00000533811 SIPA1Q96FS4 1042 aa9.78□□□□□ -0.84
PACS1-214ENST00000533811 UBL7Q96S82 380 aaPredicted RBP9.78□□□□□ -0.84
PACS1-214ENST00000533811 DMAP1Q9NPF5 467 aaPredicted RBP9.78□□□□□ -0.84
PACS1-214ENST00000533811 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.78□□□□□ -0.842e-8■■■■■ 67.3
PACS1-214ENST00000533811 OLFML3Q9NRN5 406 aa9.78□□□□□ -0.84
PACS1-214ENST00000533811 KRT82Q9NSB4 513 aa9.78□□□□□ -0.84
PACS1-214ENST00000533811 TOR4AQ9NXH8 423 aa9.78□□□□□ -0.84
PACS1-214ENST00000533811 HSPBP1Q9NZL4 362 aa9.78□□□□□ -0.84
PACS1-214ENST00000533811 DKK4Q9UBT3 224 aa9.78□□□□□ -0.84
PACS1-214ENST00000533811 BTBD3Q9Y2F9 522 aa9.78□□□□□ -0.84
PACS1-214ENST00000533811 GFRA2O00451 464 aa9.77□□□□□ -0.85
PACS1-214ENST00000533811 KIAA0391O15091 583 aaKnown RBP9.77□□□□□ -0.85
PACS1-214ENST00000533811 MDM4O15151 490 aa9.77□□□□□ -0.85
PACS1-214ENST00000533811 SYNCRIPO60506 623 aaKnown RBP9.77□□□□□ -0.85
PACS1-214ENST00000533811 PHACTR2O75167 634 aa9.77□□□□□ -0.85
PACS1-214ENST00000533811 TBX18O95935 607 aa9.77□□□□□ -0.85
PACS1-214ENST00000533811 CST3P01034 146 aaPredicted RBP9.77□□□□□ -0.85
PACS1-214ENST00000533811 IL12RB1P42701 662 aa9.77□□□□□ -0.85
PACS1-214ENST00000533811 CSNK1EP49674 416 aaKnown RBP9.77□□□□□ -0.85
PACS1-214ENST00000533811 PGFP49763 221 aa9.77□□□□□ -0.85
PACS1-214ENST00000533811 TUBP50607 506 aa9.77□□□□□ -0.85
PACS1-214ENST00000533811 TPMTP51580 245 aa9.77□□□□□ -0.85
PACS1-214ENST00000533811 CYP2J2P51589 502 aa9.77□□□□□ -0.85
PACS1-214ENST00000533811 CDH8P55286 799 aa9.77□□□□□ -0.85
PACS1-214ENST00000533811 SUZ12Q15022 739 aaKnown RBP9.77□□□□□ -0.85
PACS1-214ENST00000533811 DHRS13Q6UX07 377 aa9.77□□□□□ -0.85
PACS1-214ENST00000533811 HTR3DQ70Z44 454 aa9.77□□□□□ -0.85
PACS1-214ENST00000533811 TMPRSS6Q8IU80 811 aa9.77□□□□□ -0.85
PACS1-214ENST00000533811 SCUBE3Q8IX30 993 aa9.77□□□□□ -0.85
PACS1-214ENST00000533811 BAHD1Q8TBE0 780 aaPredicted RBP9.77□□□□□ -0.85
PACS1-214ENST00000533811 SLC39A7Q92504 469 aa9.77□□□□□ -0.85
PACS1-214ENST00000533811 PRCCQ92733 491 aaPredicted RBP9.77□□□□□ -0.85
PACS1-214ENST00000533811 SMARCD1Q96GM5 515 aa9.77□□□□□ -0.85
PACS1-214ENST00000533811 KIF2CQ99661 725 aa9.77□□□□□ -0.85
PACS1-214ENST00000533811 CGRRF1Q99675 332 aa9.77□□□□□ -0.85
PACS1-214ENST00000533811 PANK2Q9BZ23 570 aa9.77□□□□□ -0.85
PACS1-214ENST00000533811 MKRN2Q9H000 416 aaKnown RBP9.77□□□□□ -0.85
PACS1-214ENST00000533811 SMYD3Q9H7B4 428 aa9.77□□□□□ -0.85
PACS1-214ENST00000533811 TLR8Q9NR97 1041 aaKnown RBP9.77□□□□□ -0.85
PACS1-214ENST00000533811 USP36Q9P275 1121 aaKnown RBP9.77□□□□□ -0.85
PACS1-214ENST00000533811 HELZ2Q9BYK8 2649 aaKnown RBP9.77□□□□□ -0.85
PACS1-214ENST00000533811 CKAP5Q14008 2032 aa9.77□□□□□ -0.85
PACS1-214ENST00000533811 MUC22E2RYF6 1773 aaPredicted RBP9.76□□□□□ -0.85
PACS1-214ENST00000533811 A0A087WV48 116 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 METTL12A8MUP2 240 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 PLK4O00444 970 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 KCNK3O14649 394 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 CLIC2O15247 247 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 CCDC130P13994 396 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 ITPKBP27987 946 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 OXTRP30559 389 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 STAT6P42226 847 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 MAP3K7CLP57077 242 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 MYL6P60660 151 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 IL9RQ01113 521 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 ORC1Q13415 861 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 SNRNP35Q16560 246 aaKnown RBP9.76□□□□□ -0.85
PACS1-214ENST00000533811 SNX30Q5VWJ9 437 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 LARP1BQ659C4 914 aaKnown RBP9.76□□□□□ -0.85
PACS1-214ENST00000533811 LAYNQ6UX15 382 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 STXBP4Q6ZWJ1 553 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 ACOT1Q86TX2 421 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 CCDC65Q8IXS2 484 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 PDCD7Q8N8D1 485 aaKnown RBP9.76□□□□□ -0.85
PACS1-214ENST00000533811 ENGASEQ8NFI3 743 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 CADM4Q8NFZ8 388 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 UCMAQ8WVF2 138 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 HPS3Q969F9 1004 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 ELMO3Q96BJ8 720 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 CLIC6Q96NY7 704 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 NUP58Q9BVL2 599 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 KLF16Q9BXK1 252 aaPredicted RBP9.76□□□□□ -0.85
PACS1-214ENST00000533811 ITM2CQ9NQX7 267 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 MARK1Q9P0L2 795 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 NUDT5Q9UKK9 219 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 SMC3Q9UQE7 1217 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 NFE2L3Q9Y4A8 694 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 PCDHGB2Q9Y5G2 931 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 SNX11Q9Y5W9 270 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 CLIC4Q9Y696 253 aa9.76□□□□□ -0.85
PACS1-214ENST00000533811 VPS37CA5D8V6 355 aaPredicted RBP9.75□□□□□ -0.85
PACS1-214ENST00000533811 CYP26A1O43174 497 aa9.75□□□□□ -0.85
PACS1-214ENST00000533811 TNFSF14O43557 240 aa9.75□□□□□ -0.85
PACS1-214ENST00000533811 C1QL1O75973 258 aa9.75□□□□□ -0.85
PACS1-214ENST00000533811 HMBSP08397 361 aa9.75□□□□□ -0.85
PACS1-214ENST00000533811 CISD3P0C7P0 127 aa9.75□□□□□ -0.85
PACS1-214ENST00000533811 ZDHHC11BP0C7U3 371 aa9.75□□□□□ -0.85
PACS1-214ENST00000533811 HLA-EP13747 358 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms