RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 CACTINQ8WUQ7 758 aaKnown RBP13.04□□□□□ -0.32
SVIP-205ENST00000533774 SCFD1Q8WVM8 642 aa13.04□□□□□ -0.32
SVIP-205ENST00000533774 FBXO32Q969P5 355 aa13.04□□□□□ -0.32
SVIP-205ENST00000533774 HPDLQ96IR7 371 aa13.04□□□□□ -0.32
SVIP-205ENST00000533774 BBS2Q9BXC9 721 aa13.04□□□□□ -0.32
SVIP-205ENST00000533774 B3GNT5Q9BYG0 378 aa13.04□□□□□ -0.32
SVIP-205ENST00000533774 SEMA4CQ9C0C4 833 aa13.04□□□□□ -0.32
SVIP-205ENST00000533774 RBAKQ9NYW8 714 aaPredicted RBP13.04□□□□□ -0.32
SVIP-205ENST00000533774 STON1Q9Y6Q2 735 aa13.04□□□□□ -0.32
SVIP-205ENST00000533774 H0Y8X5 98 aa13.03□□□□□ -0.32
SVIP-205ENST00000533774 GFRA2O00451 464 aa13.03□□□□□ -0.32
SVIP-205ENST00000533774 KRT18P05783 430 aaKnown RBP13.03□□□□□ -0.32
SVIP-205ENST00000533774 ZDHHC11BP0C7U3 371 aa13.03□□□□□ -0.32
SVIP-205ENST00000533774 IL12RB1P42701 662 aa13.03□□□□□ -0.32
SVIP-205ENST00000533774 IL9RQ01113 521 aa13.03□□□□□ -0.32
SVIP-205ENST00000533774 GRIN1Q05586 938 aa13.03□□□□□ -0.32
SVIP-205ENST00000533774 POSTNQ15063 836 aa13.03□□□□□ -0.32
SVIP-205ENST00000533774 MAPRE1Q15691 268 aaKnown RBP13.03□□□□□ -0.32
SVIP-205ENST00000533774 SNX30Q5VWJ9 437 aa13.03□□□□□ -0.32
SVIP-205ENST00000533774 HTR3DQ70Z44 454 aa13.03□□□□□ -0.32
SVIP-205ENST00000533774 HS2ST1Q7LGA3 356 aa13.03□□□□□ -0.32
SVIP-205ENST00000533774 TMPRSS12Q86WS5 348 aa13.03□□□□□ -0.32
SVIP-205ENST00000533774 CACUL1Q86Y37 369 aa13.03□□□□□ -0.32
SVIP-205ENST00000533774 LURAP1LQ8IV03 231 aa13.03□□□□□ -0.32
SVIP-205ENST00000533774 NUP93Q8N1F7 819 aa13.03□□□□□ -0.32
SVIP-205ENST00000533774 RAD54LQ92698 747 aa13.03□□□□□ -0.32
SVIP-205ENST00000533774 KCNK16Q96T55 309 aa13.03□□□□□ -0.32
SVIP-205ENST00000533774 KIF2CQ99661 725 aa13.03□□□□□ -0.32
SVIP-205ENST00000533774 LLPHQ9BRT6 129 aaKnown RBP13.03□□□□□ -0.32
SVIP-205ENST00000533774 CBWD1Q9BRT8 395 aa13.03□□□□□ -0.32
SVIP-205ENST00000533774 C6orf106Q9H6K1 298 aaPredicted RBP13.03□□□□□ -0.32
SVIP-205ENST00000533774 PLK2Q9NYY3 685 aa13.03□□□□□ -0.32
SVIP-205ENST00000533774 EHD2Q9NZN4 543 aa13.03□□□□□ -0.32
SVIP-205ENST00000533774 MARK1Q9P0L2 795 aa13.03□□□□□ -0.32
SVIP-205ENST00000533774 COL12A1Q99715 3063 aa13.02□□□□□ -0.32
SVIP-205ENST00000533774 TBCAO75347 108 aaKnown RBP13.02□□□□□ -0.33
SVIP-205ENST00000533774 TBX18O95935 607 aa13.02□□□□□ -0.33
SVIP-205ENST00000533774 IGLV3-19P01714 112 aa13.02□□□□□ -0.33
SVIP-205ENST00000533774 PTPN1P18031 435 aaKnown RBP13.02□□□□□ -0.33
SVIP-205ENST00000533774 GRK6P43250 576 aa13.02□□□□□ -0.33
SVIP-205ENST00000533774 DGKGP49619 791 aa13.02□□□□□ -0.33
SVIP-205ENST00000533774 CASP5P51878 434 aa13.02□□□□□ -0.33
SVIP-205ENST00000533774 COPAP53621 1224 aa13.02□□□□□ -0.33
SVIP-205ENST00000533774 ENPP2Q13822 863 aa13.02□□□□□ -0.33
SVIP-205ENST00000533774 LRRC69Q6ZNQ3 347 aa13.02□□□□□ -0.33
SVIP-205ENST00000533774 GPR155Q7Z3F1 870 aa13.02□□□□□ -0.33
SVIP-205ENST00000533774 FAM124AQ86V42 546 aa13.02□□□□□ -0.33
SVIP-205ENST00000533774 TMPRSS6Q8IU80 811 aa13.02□□□□□ -0.33
SVIP-205ENST00000533774 BHMTQ93088 406 aa13.02□□□□□ -0.33
SVIP-205ENST00000533774 NXPE2Q96DL1 559 aa13.02□□□□□ -0.33
SVIP-205ENST00000533774 KLF16Q9BXK1 252 aaPredicted RBP13.02□□□□□ -0.33
SVIP-205ENST00000533774 FGFBP2Q9BYJ0 223 aa13.02□□□□□ -0.33
SVIP-205ENST00000533774 PCIF1Q9H4Z3 704 aa13.02□□□□□ -0.33
SVIP-205ENST00000533774 INTS13Q9NVM9 706 aa13.02□□□□□ -0.33
SVIP-205ENST00000533774 IL37Q9NZH6 218 aa13.02□□□□□ -0.33
SVIP-205ENST00000533774 TBC1D7Q9P0N9 293 aa13.02□□□□□ -0.33
SVIP-205ENST00000533774 FBXO10Q9UK96 956 aa13.02□□□□□ -0.33
SVIP-205ENST00000533774 ANKRD6Q9Y2G4 727 aa13.02□□□□□ -0.33
SVIP-205ENST00000533774 PIEZO2Q9H5I5 2752 aa13.01□□□□□ -0.33
SVIP-205ENST00000533774 TEX51A0A1B0GUA7 166 aa13.01□□□□□ -0.33
SVIP-205ENST00000533774 ARHGAP6O43182 974 aa13.01□□□□□ -0.33
SVIP-205ENST00000533774 PCDHGA12O60330 932 aa13.01□□□□□ -0.33
SVIP-205ENST00000533774 TMEM191BP0C7N4 346 aa13.01□□□□□ -0.33
SVIP-205ENST00000533774 ACO1P21399 889 aaKnown RBP13.01□□□□□ -0.33
SVIP-205ENST00000533774 DDIT3P35638 169 aa13.01□□□□□ -0.33
SVIP-205ENST00000533774 GNL1P36915 607 aaPredicted RBP13.01□□□□□ -0.33
SVIP-205ENST00000533774 TLE3Q04726 772 aa13.01□□□□□ -0.33
SVIP-205ENST00000533774 DNAJC3Q13217 504 aa13.01□□□□□ -0.33
SVIP-205ENST00000533774 SUZ12Q15022 739 aaKnown RBP13.01□□□□□ -0.33
SVIP-205ENST00000533774 SF3A1Q15459 793 aaKnown RBP13.01□□□□□ -0.33
SVIP-205ENST00000533774 E2F4Q16254 413 aa13.01□□□□□ -0.33
SVIP-205ENST00000533774 PAQR9Q6ZVX9 377 aa13.01□□□□□ -0.33
SVIP-205ENST00000533774 PDZD8Q8NEN9 1154 aa13.01□□□□□ -0.33
SVIP-205ENST00000533774 SNIP1Q8TAD8 396 aaKnown RBP13.01□□□□□ -0.33
SVIP-205ENST00000533774 OVCA2Q8WZ82 227 aa13.01□□□□□ -0.33
SVIP-205ENST00000533774 SNX19Q92543 992 aa13.01□□□□□ -0.33
SVIP-205ENST00000533774 HVCN1Q96D96 273 aa13.01□□□□□ -0.33
SVIP-205ENST00000533774 SIPA1Q96FS4 1042 aa13.01□□□□□ -0.33
SVIP-205ENST00000533774 XPO6Q96QU8 1125 aaKnown RBP13.01□□□□□ -0.33
SVIP-205ENST00000533774 TM9SF3Q9HD45 589 aa13.01□□□□□ -0.33
SVIP-205ENST00000533774 THAP10Q9P2Z0 257 aaPredicted RBP13.01□□□□□ -0.33
SVIP-205ENST00000533774 AK5Q9Y6K8 562 aa13.01□□□□□ -0.33
SVIP-205ENST00000533774 DOPEY2Q9Y3R5 2298 aa13.01□□□□□ -0.33
SVIP-205ENST00000533774 FAM92AA1XBS5 289 aa13□□□□□ -0.33
SVIP-205ENST00000533774 CAPN9O14815 690 aa13□□□□□ -0.33
SVIP-205ENST00000533774 RTN3O95197 1032 aaPredicted RBP13□□□□□ -0.33
SVIP-205ENST00000533774 CST3P01034 146 aaPredicted RBP13□□□□□ -0.33
SVIP-205ENST00000533774 JUPP14923 745 aa13□□□□□ -0.33
SVIP-205ENST00000533774 PRKCHP24723 683 aa13□□□□□ -0.33
SVIP-205ENST00000533774 OXTRP30559 389 aa13□□□□□ -0.33
SVIP-205ENST00000533774 ACSL1P33121 698 aa13□□□□□ -0.33
SVIP-205ENST00000533774 ABCD1P33897 745 aa13□□□□□ -0.33
SVIP-205ENST00000533774 CTSKP43235 329 aa13□□□□□ -0.33
SVIP-205ENST00000533774 TUBP50607 506 aa13□□□□□ -0.33
SVIP-205ENST00000533774 AFF3P51826 1226 aaKnown RBP13□□□□□ -0.33
SVIP-205ENST00000533774 CCDC173Q0VFZ6 552 aa13□□□□□ -0.33
SVIP-205ENST00000533774 TARDBPQ13148 414 aaKnown RBP eCLIP13□□□□□ -0.33
SVIP-205ENST00000533774 RTP5Q14D33 572 aa13□□□□□ -0.33
SVIP-205ENST00000533774 GEN1Q17RS7 908 aa13□□□□□ -0.33
SVIP-205ENST00000533774 PRAMEF14Q5SWL7 426 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms