RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 ARHGAP18Q8N392 663 aa13.06□□□□□ -0.32
CAPRIN1-213ENST00000533562 PHTF2Q8N3S3 785 aa13.06□□□□□ -0.32
CAPRIN1-213ENST00000533562 SLC4A11Q8NBS3 891 aa13.06□□□□□ -0.32
CAPRIN1-213ENST00000533562 MDGA1Q8NFP4 955 aa13.06□□□□□ -0.32
CAPRIN1-213ENST00000533562 SPATA20Q8TB22 786 aa13.06□□□□□ -0.32
CAPRIN1-213ENST00000533562 TATDN2Q93075 761 aa13.06□□□□□ -0.32
CAPRIN1-213ENST00000533562 WBP2Q969T9 261 aa13.06□□□□□ -0.32
CAPRIN1-213ENST00000533562 BBS2Q9BXC9 721 aa13.06□□□□□ -0.32
CAPRIN1-213ENST00000533562 NMUR1Q9HB89 426 aa13.06□□□□□ -0.32
CAPRIN1-213ENST00000533562 BCCIPQ9P287 314 aaKnown RBP eCLIP13.06□□□□□ -0.32
CAPRIN1-213ENST00000533562 ARMCX3Q9UH62 379 aaPredicted RBP13.06□□□□□ -0.32
CAPRIN1-213ENST00000533562 INVSQ9Y283 1065 aa13.06□□□□□ -0.32
CAPRIN1-213ENST00000533562 STARD13Q9Y3M8 1113 aa13.06□□□□□ -0.32
CAPRIN1-213ENST00000533562 USP3Q9Y6I4 520 aa13.06□□□□□ -0.32
CAPRIN1-213ENST00000533562 CHD8Q9HCK8 2581 aa13.06□□□□□ -0.32
CAPRIN1-213ENST00000533562 MYO16Q9Y6X6 1858 aa13.06□□□□□ -0.32
CAPRIN1-213ENST00000533562 EML5Q05BV3 1969 aa13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 BCLAF3A2AJT9 711 aaKnown RBP13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 ANTXRLA6NF34 631 aa13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 NEDD8-MDP1E9PL57 170 aa13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 PSMA7O14818 248 aa13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 ZBTB24O43167 697 aaPredicted RBP13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 MAP3K13O43283 966 aa13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 TYRP14679 529 aa13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 PPP1R2P41236 205 aa13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 YWHAEP62258 255 aaKnown RBP13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 CBWD6Q4V339 395 aa13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 CBWD3Q5JTY5 395 aa13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 CBWD5Q5RIA9 395 aa13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 C10orf76Q5T2E6 689 aa13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 PMS2CLQ68D20 193 aa13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 ARHGAP17Q68EM7 881 aa13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 GRAMD4Q6IC98 578 aa13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 SDE2Q6IQ49 451 aa13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 TPGS1Q6ZTW0 290 aa13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 SCD5Q86SK9 330 aa13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 MIB1Q86YT6 1006 aa13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 ELOA2Q8IYF1 753 aaPredicted RBP13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 PGBD3Q8N328 593 aa13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 ZNF513Q8N8E2 541 aaPredicted RBP13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 TERB1Q8NA31 727 aa13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 ANKRD52Q8NB46 1076 aa13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 SPACA7Q96KW9 195 aa13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 METTL14Q9HCE5 456 aaKnown RBP13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 DNAJC17Q9NVM6 304 aaKnown RBP13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 MARK1Q9P0L2 795 aa13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 NUDT5Q9UKK9 219 aa13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 CIZ1Q9ULV3 898 aaPredicted RBP13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 COQ4Q9Y3A0 265 aa13.05□□□□□ -0.32
CAPRIN1-213ENST00000533562 CACNG3O60359 315 aa13.04□□□□□ -0.32
CAPRIN1-213ENST00000533562 ADAM23O75077 832 aa13.04□□□□□ -0.32
CAPRIN1-213ENST00000533562 HNRNPLP14866 589 aaKnown RBP eCLIP13.04□□□□□ -0.32
CAPRIN1-213ENST00000533562 NTSR1P30989 418 aa13.04□□□□□ -0.32
CAPRIN1-213ENST00000533562 CHKAP35790 457 aa13.04□□□□□ -0.32
CAPRIN1-213ENST00000533562 CUL2Q13617 745 aa13.04□□□□□ -0.32
CAPRIN1-213ENST00000533562 PPM1JQ5JR12 505 aa13.04□□□□□ -0.32
CAPRIN1-213ENST00000533562 STPG1Q5TH74 334 aa13.04□□□□□ -0.32
CAPRIN1-213ENST00000533562 ZC3H3Q8IXZ2 948 aaKnown RBP13.04□□□□□ -0.32
CAPRIN1-213ENST00000533562 OLIG1Q8TAK6 271 aa13.04□□□□□ -0.32
CAPRIN1-213ENST00000533562 HMGB4Q8WW32 186 aa13.04□□□□□ -0.32
CAPRIN1-213ENST00000533562 DHTKD1Q96HY7 919 aaPredicted RBP13.04□□□□□ -0.32
CAPRIN1-213ENST00000533562 ARID3AQ99856 593 aa13.04□□□□□ -0.32
CAPRIN1-213ENST00000533562 DCLK3Q9C098 648 aa13.04□□□□□ -0.32
CAPRIN1-213ENST00000533562 KIAA1257Q9ULG3 409 aa13.04□□□□□ -0.32
CAPRIN1-213ENST00000533562 STRIP2Q9ULQ0 834 aa13.04□□□□□ -0.32
CAPRIN1-213ENST00000533562 TCRBV21S2A2A0A5A6 115 aa13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 KHNYNO15037 678 aaKnown RBP13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 MDM4O15151 490 aa13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 STC2O76061 302 aa13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 ZBED1O96006 694 aa13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 CHRM1P11229 460 aaPredicted RBP13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 TBXAS1P24557 533 aaPredicted RBP13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 P2RY2P41231 377 aa13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 DHPSP49366 369 aaPredicted RBP13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 DGKGP49619 791 aa13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 PMS1P54277 932 aaKnown RBP13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 CETN1Q12798 172 aa13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 EFEMP1Q12805 493 aa13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 SGO2Q562F6 1265 aa13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 RAB41Q5JT25 222 aa13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 SPDYCQ5MJ68 293 aa13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 RNF43Q68DV7 783 aa13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 Q6ZNB5 142 aa13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 RSRC2Q7L4I2 434 aaKnown RBP13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 LPCAT2Q7L5N7 544 aa13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 CYP2U1Q7Z449 544 aa13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 PIGZQ86VD9 579 aa13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 CHPFQ8IZ52 775 aa13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 ERCC4Q92889 916 aaPredicted RBP13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 SLC35C1Q96A29 364 aa13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 CEP63Q96MT8 703 aa13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 SMOC1Q9H4F8 434 aa13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 LRRC4Q9HBW1 653 aa13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 ZDHHC4Q9NPG8 344 aa13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 RXFP3Q9NSD7 469 aa13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 HESX1Q9UBX0 185 aa13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 RASAL2Q9UJF2 1139 aa13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 KIAA1549LQ6ZVL6 1849 aa13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 THADAQ6YHU6 1953 aa13.03□□□□□ -0.32
CAPRIN1-213ENST00000533562 TRIM49BA6NDI0 452 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms