RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 INTS13Q9NVM9 706 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 GMIPQ9P107 970 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 WDR35Q9P2L0 1181 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 CHORDC1Q9UHD1 332 aaPredicted RBP8.27□□□□□ -1.09
NXF1-215ENST00000533440 EIF2B4Q9UI10 523 aaKnown RBP8.27□□□□□ -1.09
NXF1-215ENST00000533440 FBXO10Q9UK96 956 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 EXOC7Q9UPT5 735 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 STON1Q9Y6Q2 735 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 PTPRJQ12913 1337 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 TEX51A0A1B0GUA7 166 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 GOLGA8IPA6NC78 632 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 CAPN8A6NHC0 703 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 GOLGA8JA6NMD2 632 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 CLDN5O00501 218 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 CAPN9O14815 690 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 NPC1O15118 1278 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 C7P10643 843 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 IRF1P10914 325 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 ACO1P21399 889 aaKnown RBP8.26□□□□□ -1.09
NXF1-215ENST00000533440 DDIT3P35638 169 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 GNL1P36915 607 aaPredicted RBP8.26□□□□□ -1.09
NXF1-215ENST00000533440 DGKGP49619 791 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 CSNK1EP49674 416 aaKnown RBP8.26□□□□□ -1.09
NXF1-215ENST00000533440 AFF3P51826 1226 aaKnown RBP8.26□□□□□ -1.09
NXF1-215ENST00000533440 CFHR1Q03591 330 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 STARD3Q14849 445 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 KIF19Q2TAC6 998 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 LRRC69Q6ZNQ3 347 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 HS2ST1Q7LGA3 356 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 TMPRSS6Q8IU80 811 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 KRI1Q8N9T8 703 aaKnown RBP8.26□□□□□ -1.09
NXF1-215ENST00000533440 ENGASEQ8NFI3 743 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 SCAMP5Q8TAC9 235 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 SNIP1Q8TAD8 396 aaKnown RBP8.26□□□□□ -1.09
NXF1-215ENST00000533440 IGSF8Q969P0 613 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 SIPA1Q96FS4 1042 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 ACCSQ96QU6 501 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 MRPL45Q9BRJ2 306 aaKnown RBP8.26□□□□□ -1.09
NXF1-215ENST00000533440 CBWD1Q9BRT8 395 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 NUP58Q9BVL2 599 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 KLF16Q9BXK1 252 aaPredicted RBP8.26□□□□□ -1.09
NXF1-215ENST00000533440 B3GNT5Q9BYG0 378 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 PCED1AQ9H1Q7 454 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 COMMD8Q9NX08 183 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 THAP10Q9P2Z0 257 aaPredicted RBP8.26□□□□□ -1.09
NXF1-215ENST00000533440 SEL1LQ9UBV2 794 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 R3HCC1Q9Y3T6 440 aaKnown RBP8.26□□□□□ -1.09
NXF1-215ENST00000533440 PCDHGA1Q9Y5H4 931 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 SNX11Q9Y5W9 270 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 SLCO1B1Q9Y6L6 691 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 HECTD1Q9ULT8 2610 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 COL6A6A6NMZ7 2263 aa8.26□□□□□ -1.09
NXF1-215ENST00000533440 SPTA1P02549 2419 aa8.25□□□□□ -1.09
NXF1-215ENST00000533440 TULP1O00294 542 aaPredicted RBP8.25□□□□□ -1.09
NXF1-215ENST00000533440 RRP8O43159 456 aaKnown RBP8.25□□□□□ -1.09
NXF1-215ENST00000533440 TLR5O60602 858 aa8.25□□□□□ -1.09
NXF1-215ENST00000533440 TNNC2P02585 160 aa8.25□□□□□ -1.09
NXF1-215ENST00000533440 IL12RB1P42701 662 aa8.25□□□□□ -1.09
NXF1-215ENST00000533440 GRIA4P48058 902 aa8.25□□□□□ -1.09
NXF1-215ENST00000533440 PGFP49763 221 aa8.25□□□□□ -1.09
NXF1-215ENST00000533440 CCT8P50990 548 aa8.25□□□□□ -1.09
NXF1-215ENST00000533440 COPAP53621 1224 aa8.25□□□□□ -1.09
NXF1-215ENST00000533440 SLC5A3P53794 718 aa8.25□□□□□ -1.09
NXF1-215ENST00000533440 RTP5Q14D33 572 aa8.25□□□□□ -1.09
NXF1-215ENST00000533440 SF3A1Q15459 793 aaKnown RBP8.25□□□□□ -1.09
NXF1-215ENST00000533440 DUOXA2Q1HG44 320 aa8.25□□□□□ -1.09
NXF1-215ENST00000533440 C6orf118Q5T5N4 469 aa8.25□□□□□ -1.09
NXF1-215ENST00000533440 TPGS1Q6ZTW0 290 aa8.25□□□□□ -1.09
NXF1-215ENST00000533440 PAQR9Q6ZVX9 377 aa8.25□□□□□ -1.09
NXF1-215ENST00000533440 GPR155Q7Z3F1 870 aa8.25□□□□□ -1.09
NXF1-215ENST00000533440 GPD1LQ8N335 351 aa8.25□□□□□ -1.09
NXF1-215ENST00000533440 B3GALNT2Q8NCR0 500 aa8.25□□□□□ -1.09
NXF1-215ENST00000533440 OR6B3Q8NGW1 331 aa8.25□□□□□ -1.09
NXF1-215ENST00000533440 P2RY11Q96G91 374 aa8.25□□□□□ -1.09
NXF1-215ENST00000533440 ZSCAN31Q96LW9 406 aaPredicted RBP8.25□□□□□ -1.09
NXF1-215ENST00000533440 PHF12Q96QT6 1004 aa8.25□□□□□ -1.09
NXF1-215ENST00000533440 KCNK16Q96T55 309 aa8.25□□□□□ -1.09
NXF1-215ENST00000533440 MMS19Q96T76 1030 aa8.25□□□□□ -1.09
NXF1-215ENST00000533440 NRSN2Q9GZP1 204 aa8.25□□□□□ -1.09
NXF1-215ENST00000533440 SNX25Q9H3E2 840 aa8.25□□□□□ -1.09
NXF1-215ENST00000533440 DPEP3Q9H4B8 488 aa8.25□□□□□ -1.09
NXF1-215ENST00000533440 PCIF1Q9H4Z3 704 aa8.25□□□□□ -1.09
NXF1-215ENST00000533440 MRPL44Q9H9J2 332 aaKnown RBP8.25□□□□□ -1.09
NXF1-215ENST00000533440 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.25□□□□□ -1.09
NXF1-215ENST00000533440 ANKRD6Q9Y2G4 727 aa8.25□□□□□ -1.09
NXF1-215ENST00000533440 SLC27A6Q9Y2P4 619 aa8.25□□□□□ -1.09
NXF1-215ENST00000533440 TMEM131Q92545 1883 aa8.25□□□□□ -1.09
NXF1-215ENST00000533440 COL5A1P20908 1838 aaPredicted RBP8.24□□□□□ -1.09
NXF1-215ENST00000533440 CKAP5Q14008 2032 aa8.24□□□□□ -1.09
NXF1-215ENST00000533440 H0Y8X5 98 aa8.24□□□□□ -1.09
NXF1-215ENST00000533440 GCNT3O95395 438 aa8.24□□□□□ -1.09
NXF1-215ENST00000533440 TBX18O95935 607 aa8.24□□□□□ -1.09
NXF1-215ENST00000533440 CST3P01034 146 aaPredicted RBP8.24□□□□□ -1.09
NXF1-215ENST00000533440 C1SP09871 688 aa8.24□□□□□ -1.09
NXF1-215ENST00000533440 CDK4P11802 303 aa8.24□□□□□ -1.09
NXF1-215ENST00000533440 JUPP14923 745 aa8.24□□□□□ -1.09
NXF1-215ENST00000533440 GAP43P17677 238 aa8.24□□□□□ -1.09
NXF1-215ENST00000533440 LONP1P36776 959 aaKnown RBP8.24□□□□□ -1.09
NXF1-215ENST00000533440 CTSKP43235 329 aa8.24□□□□□ -1.09
NXF1-215ENST00000533440 CASP5P51878 434 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms