RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 Q6ZNB5 142 aa24.63■■□□□ 1.53
SMPD1-209ENST00000533196 PRR23CQ6ZRP0 262 aa24.63■■□□□ 1.53
SMPD1-209ENST00000533196 TRMT11Q7Z4G4 463 aaKnown RBP24.63■■□□□ 1.53
SMPD1-209ENST00000533196 KBTBD6Q86V97 674 aa24.63■■□□□ 1.53
SMPD1-209ENST00000533196 TTC30AQ86WT1 665 aa24.63■■□□□ 1.53
SMPD1-209ENST00000533196 TERB1Q8NA31 727 aa24.63■■□□□ 1.53
SMPD1-209ENST00000533196 IL17RCQ8NAC3 791 aa24.63■■□□□ 1.53
SMPD1-209ENST00000533196 DCLK3Q9C098 648 aa24.63■■□□□ 1.53
SMPD1-209ENST00000533196 CDV3Q9UKY7 258 aaKnown RBP24.63■■□□□ 1.53
SMPD1-209ENST00000533196 CTNND2Q9UQB3 1225 aa24.63■■□□□ 1.53
SMPD1-209ENST00000533196 TBC1D3BA6NDS4 549 aa24.62■■□□□ 1.53
SMPD1-209ENST00000533196 MDM4O15151 490 aa24.62■■□□□ 1.53
SMPD1-209ENST00000533196 CACNG3O60359 315 aa24.62■■□□□ 1.53
SMPD1-209ENST00000533196 CD19P15391 556 aa24.62■■□□□ 1.53
SMPD1-209ENST00000533196 TKTL1P51854 596 aa24.62■■□□□ 1.53
SMPD1-209ENST00000533196 UBE2HP62256 183 aa24.62■■□□□ 1.53
SMPD1-209ENST00000533196 MESP2Q0VG99 397 aa24.62■■□□□ 1.53
SMPD1-209ENST00000533196 GOLGA7BQ2TAP0 167 aa24.62■■□□□ 1.53
SMPD1-209ENST00000533196 PLK5Q496M5 336 aa24.62■■□□□ 1.53
SMPD1-209ENST00000533196 USP39Q53GS9 565 aaKnown RBP24.62■■□□□ 1.53
SMPD1-209ENST00000533196 CCDC33Q8N5R6 958 aa24.62■■□□□ 1.53
SMPD1-209ENST00000533196 ALLCQ8N6M5 410 aa24.62■■□□□ 1.53
SMPD1-209ENST00000533196 NAT16Q8N8M0 369 aa24.62■■□□□ 1.53
SMPD1-209ENST00000533196 TXNDC5Q8NBS9 432 aaKnown RBP24.62■■□□□ 1.53
SMPD1-209ENST00000533196 NETO1Q8TDF5 533 aa24.62■■□□□ 1.53
SMPD1-209ENST00000533196 RTKNQ9BST9 563 aa24.62■■□□□ 1.53
SMPD1-209ENST00000533196 BBS2Q9BXC9 721 aa24.62■■□□□ 1.53
SMPD1-209ENST00000533196 POLMQ9NP87 494 aaPredicted RBP24.62■■□□□ 1.53
SMPD1-209ENST00000533196 NUDT5Q9UKK9 219 aa24.62■■□□□ 1.53
SMPD1-209ENST00000533196 STARD13Q9Y3M8 1113 aa24.62■■□□□ 1.53
SMPD1-209ENST00000533196 STC2O76061 302 aa24.61■■□□□ 1.53
SMPD1-209ENST00000533196 RHOBTB1O94844 696 aa24.61■■□□□ 1.53
SMPD1-209ENST00000533196 KLF8O95600 359 aaPredicted RBP24.61■■□□□ 1.53
SMPD1-209ENST00000533196 FGFR1OPO95684 399 aaKnown RBP24.61■■□□□ 1.53
SMPD1-209ENST00000533196 ZBED1O96006 694 aa24.61■■□□□ 1.53
SMPD1-209ENST00000533196 SETSIPP0DME0 302 aa24.61■■□□□ 1.53
SMPD1-209ENST00000533196 TIE1P35590 1138 aa24.61■■□□□ 1.53
SMPD1-209ENST00000533196 YWHAGP61981 247 aaKnown RBP eCLIP24.61■■□□□ 1.53
SMPD1-209ENST00000533196 PDE4CQ08493 712 aa24.61■■□□□ 1.53
SMPD1-209ENST00000533196 LRMPQ12912 555 aa24.61■■□□□ 1.53
SMPD1-209ENST00000533196 STILQ15468 1287 aa24.61■■□□□ 1.53
SMPD1-209ENST00000533196 ELF2Q15723 593 aa24.61■■□□□ 1.53
SMPD1-209ENST00000533196 GRAMD4Q6IC98 578 aa24.61■■□□□ 1.53
SMPD1-209ENST00000533196 TRIM59Q8IWR1 403 aa24.61■■□□□ 1.53
SMPD1-209ENST00000533196 SCML4Q8N228 414 aa24.61■■□□□ 1.53
SMPD1-209ENST00000533196 KCTD13Q8WZ19 329 aa24.61■■□□□ 1.53
SMPD1-209ENST00000533196 LRRC4Q9HBW1 653 aa24.61■■□□□ 1.53
SMPD1-209ENST00000533196 RASAL2Q9UJF2 1139 aa24.61■■□□□ 1.53
SMPD1-209ENST00000533196 STRIP2Q9ULQ0 834 aa24.61■■□□□ 1.53
SMPD1-209ENST00000533196 O00370 1275 aa24.6■■□□□ 1.53
SMPD1-209ENST00000533196 BIN1O00499 593 aa24.6■■□□□ 1.53
SMPD1-209ENST00000533196 TYRP14679 529 aa24.6■■□□□ 1.53
SMPD1-209ENST00000533196 CHKAP35790 457 aa24.6■■□□□ 1.53
SMPD1-209ENST00000533196 GCNT1Q02742 428 aa24.6■■□□□ 1.53
SMPD1-209ENST00000533196 TMEM270Q6UE05 265 aa24.6■■□□□ 1.53
SMPD1-209ENST00000533196 LCLAT1Q6UWP7 414 aa24.6■■□□□ 1.53
SMPD1-209ENST00000533196 MIB1Q86YT6 1006 aa24.6■■□□□ 1.53
SMPD1-209ENST00000533196 ABCA7Q8IZY2 2146 aa24.6■■□□□ 1.53
SMPD1-209ENST00000533196 LMO3Q8TAP4 145 aa24.6■■□□□ 1.53
SMPD1-209ENST00000533196 OLA1Q9NTK5 396 aaKnown RBP24.6■■□□□ 1.53
SMPD1-209ENST00000533196 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.6■■□□□ 1.53
SMPD1-209ENST00000533196 NEDD8-MDP1E9PL57 170 aa24.59■■□□□ 1.53
SMPD1-209ENST00000533196 SGK1O00141 431 aa24.59■■□□□ 1.53
SMPD1-209ENST00000533196 ZNF806P0C7X5 589 aa24.59■■□□□ 1.53
SMPD1-209ENST00000533196 ATXN1P54253 815 aaKnown RBP24.59■■□□□ 1.53
SMPD1-209ENST00000533196 EFEMP1Q12805 493 aa24.59■■□□□ 1.53
SMPD1-209ENST00000533196 EMC10Q5UCC4 262 aa24.59■■□□□ 1.53
SMPD1-209ENST00000533196 ANO7Q6IWH7 933 aa24.59■■□□□ 1.53
SMPD1-209ENST00000533196 TMEM92Q6UXU6 159 aa24.59■■□□□ 1.53
SMPD1-209ENST00000533196 RSRC2Q7L4I2 434 aaKnown RBP24.59■■□□□ 1.53
SMPD1-209ENST00000533196 SFTPA1Q8IWL2 248 aa24.59■■□□□ 1.53
SMPD1-209ENST00000533196 PPM1KQ8N3J5 372 aa24.59■■□□□ 1.53
SMPD1-209ENST00000533196 EHBP1Q8NDI1 1231 aa24.59■■□□□ 1.53
SMPD1-209ENST00000533196 ULBP1Q9BZM6 244 aa24.59■■□□□ 1.53
SMPD1-209ENST00000533196 DUSP15Q9H1R2 295 aaPredicted RBP24.59■■□□□ 1.53
SMPD1-209ENST00000533196 ARRDC1-AS1Q9H2J1 176 aa24.59■■□□□ 1.53
SMPD1-209ENST00000533196 DNAJC17Q9NVM6 304 aaKnown RBP24.59■■□□□ 1.53
SMPD1-209ENST00000533196 CHMP5Q9NZZ3 219 aa24.59■■□□□ 1.53
SMPD1-209ENST00000533196 MARCH2Q9P0N8 246 aa24.59■■□□□ 1.53
SMPD1-209ENST00000533196 PCDHB4Q9Y5E5 795 aa24.59■■□□□ 1.53
SMPD1-209ENST00000533196 THADAQ6YHU6 1953 aa24.59■■□□□ 1.53
SMPD1-209ENST00000533196 NUP205Q92621 2012 aa24.58■■□□□ 1.53
SMPD1-209ENST00000533196 ANTXRLA6NF34 631 aa24.58■■□□□ 1.53
SMPD1-209ENST00000533196 AFPP02771 609 aaKnown RBP24.58■■□□□ 1.53
SMPD1-209ENST00000533196 KCNH2Q12809 1159 aa24.58■■□□□ 1.53
SMPD1-209ENST00000533196 PKDCCQ504Y2 493 aa24.58■■□□□ 1.53
SMPD1-209ENST00000533196 C10orf76Q5T2E6 689 aa24.58■■□□□ 1.53
SMPD1-209ENST00000533196 TPGS1Q6ZTW0 290 aa24.58■■□□□ 1.53
SMPD1-209ENST00000533196 ZNF513Q8N8E2 541 aaPredicted RBP24.58■■□□□ 1.53
SMPD1-209ENST00000533196 MDGA1Q8NFP4 955 aa24.58■■□□□ 1.53
SMPD1-209ENST00000533196 SRRTQ9BXP5 876 aaKnown RBP24.58■■□□□ 1.53
SMPD1-209ENST00000533196 CNGB3Q9NQW8 809 aa24.58■■□□□ 1.53
SMPD1-209ENST00000533196 KIAA1468Q9P260 1216 aa24.58■■□□□ 1.53
SMPD1-209ENST00000533196 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.58■■□□□ 1.53
SMPD1-209ENST00000533196 PLXND1Q9Y4D7 1925 aa24.58■■□□□ 1.53
SMPD1-209ENST00000533196 TULP2O00295 520 aa24.57■■□□□ 1.52
SMPD1-209ENST00000533196 ADAM23O75077 832 aa24.57■■□□□ 1.52
SMPD1-209ENST00000533196 STX17P56962 302 aa24.57■■□□□ 1.52
SMPD1-209ENST00000533196 CNGA2Q16280 664 aa24.57■■□□□ 1.52
SMPD1-209ENST00000533196 PLA2G2CQ5R387 149 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms