RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 PCDHGA2Q9Y5H1 932 aa13.6□□□□□ -0.23
TRAPPC4-212ENST00000533058 ZNF638Q14966 1978 aaKnown RBP13.6□□□□□ -0.23
TRAPPC4-212ENST00000533058 O00370 1275 aa13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 AP5Z1O43299 807 aa13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 TLR5O60602 858 aa13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 TDGF1P13385 188 aa13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 HOXA6P31267 233 aa13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 CLCN1P35523 988 aa13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 ATP5C1P36542 298 aaKnown RBP13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 PBX1P40424 430 aa13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 EIF2DP41214 584 aaKnown RBP13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 CXCL12P48061 93 aa13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 PGFP49763 221 aa13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 GALK1P51570 392 aa13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 NRLP54845 237 aa13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 JAM2P57087 298 aa13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 CSTF1Q05048 431 aaKnown RBP13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 BST2Q10589 180 aaKnown RBP13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 TAF3Q5VWG9 929 aa13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 FSTL4Q6MZW2 842 aa13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 LCLAT1Q6UWP7 414 aa13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 TMC6Q7Z403 805 aa13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 TADA2BQ86TJ2 420 aa13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 PIGZQ86VD9 579 aa13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 TTC30AQ86WT1 665 aa13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 FMNL3Q8IVF7 1028 aa13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 VSTM4Q8IW00 320 aa13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 DRC7Q8IY82 874 aa13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 CCDC26Q8TAB7 109 aa13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 ZNF606Q8WXB4 792 aa13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 CDK5RAP1Q96SZ6 601 aaKnown RBP13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 CFAP97Q9P2B7 532 aa13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 CEP83Q9Y592 693 aa13.59□□□□□ -0.23
TRAPPC4-212ENST00000533058 ZFHX2Q9C0A1 2572 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 PRR23AA6NEV1 266 aa13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 GOLGA6L3A6NEY3 463 aa13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 LRRC53A6NM62 1247 aa13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 CHURC1-FNTBB4DL54 471 aa13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 XPO1O14980 1071 aaKnown RBP13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 GFRA3O60609 400 aa13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 LILRB5O75023 590 aa13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 ATG13O75143 517 aa13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 ZNF75DP51815 510 aa13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 PDE4CQ08493 712 aa13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 TRIM14Q14142 442 aa13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 ASIC2Q16515 512 aa13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 PKDCCQ504Y2 493 aa13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 SFMBT2Q5VUG0 894 aa13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 PM20D1Q6GTS8 502 aa13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 HTR3DQ70Z44 454 aa13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 SCD5Q86SK9 330 aa13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 PASD1Q8IV76 773 aa13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 SCML4Q8N228 414 aa13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 ARHGAP18Q8N392 663 aa13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 KCTD13Q8WZ19 329 aa13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 CD101Q93033 1021 aa13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 SECISBP2LQ93073 1101 aaKnown RBP13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 KLF16Q9BXK1 252 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 EDEM3Q9BZQ6 932 aa13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 NMUR1Q9HB89 426 aa13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 RBM12Q9NTZ6 932 aaKnown RBP13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 SEPT11Q9NVA2 429 aaKnown RBP13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 OSER1Q9NX31 292 aa13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 SMPD4Q9NXE4 827 aa13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 LUC7L2Q9Y383 392 aaKnown RBP13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 ITIH6Q6UXX5 1313 aa13.58□□□□□ -0.24
TRAPPC4-212ENST00000533058 A0A0A0MRY4 1105 aa13.57□□□□□ -0.24
TRAPPC4-212ENST00000533058 GREM1O60565 184 aa13.57□□□□□ -0.24
TRAPPC4-212ENST00000533058 CYP17A1P05093 508 aa13.57□□□□□ -0.24
TRAPPC4-212ENST00000533058 SETSIPP0DME0 302 aa13.57□□□□□ -0.24
TRAPPC4-212ENST00000533058 RALAP11233 206 aa13.57□□□□□ -0.24
TRAPPC4-212ENST00000533058 RARGP13631 454 aa13.57□□□□□ -0.24
TRAPPC4-212ENST00000533058 CYP11B1P15538 503 aa13.57□□□□□ -0.24
TRAPPC4-212ENST00000533058 FERP16591 822 aa13.57□□□□□ -0.24
TRAPPC4-212ENST00000533058 PLA2G4AP47712 749 aa13.57□□□□□ -0.24
TRAPPC4-212ENST00000533058 RGS7P49802 495 aa13.57□□□□□ -0.24
TRAPPC4-212ENST00000533058 DHCR24Q15392 516 aa13.57□□□□□ -0.24
TRAPPC4-212ENST00000533058 TSR1Q2NL82 804 aaKnown RBP13.57□□□□□ -0.24
TRAPPC4-212ENST00000533058 GAB4Q2WGN9 574 aa13.57□□□□□ -0.24
TRAPPC4-212ENST00000533058 FIGNQ5HY92 759 aa13.57□□□□□ -0.24
TRAPPC4-212ENST00000533058 DENND1BQ6P3S1 775 aa13.57□□□□□ -0.24
TRAPPC4-212ENST00000533058 RHBDF2Q6PJF5 856 aa13.57□□□□□ -0.24
TRAPPC4-212ENST00000533058 ASCL5Q7RTU5 278 aa13.57□□□□□ -0.24
TRAPPC4-212ENST00000533058 TTC16Q8NEE8 873 aa13.57□□□□□ -0.24
TRAPPC4-212ENST00000533058 ATRIPQ8WXE1 791 aa13.57□□□□□ -0.24
TRAPPC4-212ENST00000533058 BAP1Q92560 729 aa13.57□□□□□ -0.24
TRAPPC4-212ENST00000533058 ZSWIM1Q9BR11 485 aa13.57□□□□□ -0.24
TRAPPC4-212ENST00000533058 NACA2Q9H009 215 aa13.57□□□□□ -0.24
TRAPPC4-212ENST00000533058 LRRC4Q9HBW1 653 aa13.57□□□□□ -0.24
TRAPPC4-212ENST00000533058 FBRSL1Q9HCM7 1045 aaKnown RBP13.57□□□□□ -0.24
TRAPPC4-212ENST00000533058 ST7Q9NRC1 585 aa13.57□□□□□ -0.24
TRAPPC4-212ENST00000533058 DNMT3LQ9UJW3 386 aa13.57□□□□□ -0.24
TRAPPC4-212ENST00000533058 MYO6Q9UM54 1294 aa13.57□□□□□ -0.24
TRAPPC4-212ENST00000533058 SH3BP1Q9Y3L3 701 aa13.57□□□□□ -0.24
TRAPPC4-212ENST00000533058 PATJQ8NI35 1801 aa13.56□□□□□ -0.24
TRAPPC4-212ENST00000533058 A0A1W2PQH9 124 aa13.56□□□□□ -0.24
TRAPPC4-212ENST00000533058 A0A1W2PQJ5 194 aa13.56□□□□□ -0.24
TRAPPC4-212ENST00000533058 TBX18O95935 607 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms