RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 MPZL3Q6UWV2 235 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 LCA5Q86VQ0 697 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 SLC25A41Q8N5S1 370 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 SEPT1Q8WYJ6 367 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 PTPRN2Q92932 1015 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 SERAC1Q96JX3 654 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 MIPEPQ99797 713 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 PIAS1O75925 651 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 HMGCRP04035 888 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 POLBP06746 335 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 DLDP09622 509 aaKnown RBP9.72□□□□□ -0.85
BDNF-216ENST00000532997 UQCRBP14927 111 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 ATICP31939 592 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 ZNF143P52747 638 aaPredicted RBP9.72□□□□□ -0.85
BDNF-216ENST00000532997 OAZ1P54368 228 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 SESN2P58004 480 aaPredicted RBP9.72□□□□□ -0.85
BDNF-216ENST00000532997 ITGA9Q13797 1035 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 PRPSAP1Q14558 356 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 N4BP2L1Q5TBK1 243 aaPredicted RBP9.72□□□□□ -0.85
BDNF-216ENST00000532997 DEFB107AQ8IZN7 70 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.72□□□□□ -0.85
BDNF-216ENST00000532997 TMEM176AQ96HP8 235 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 CLMNQ96JQ2 1002 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 FAM84AQ96KN4 292 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 RNF157Q96PX1 679 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 C1orf21Q9H246 121 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 PNPLA8Q9NP80 782 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 CDK5RAP2Q96SN8 1893 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 LOC100653049A0A140TA62 436 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 PRR5-ARHGAP8B1AHC4 643 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 PIK3R2O00459 728 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 KRT34O76011 436 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 CLPTM1O96005 669 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 RXRBP28702 533 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 GABRB2P47870 512 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 CHN2P52757 468 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 ARHGAP8P85298 464 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 TMEM259Q4ZIN3 620 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 PPP1R15BQ5SWA1 713 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 TMEM63BQ5T3F8 832 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 RNF168Q8IYW5 571 aaPredicted RBP9.72□□□□□ -0.85
BDNF-216ENST00000532997 MCUQ8NE86 351 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 AGBL3Q8NEM8 1001 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 NT5C1AQ9BXI3 368 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 C12orf65Q9H3J6 166 aaKnown RBP9.72□□□□□ -0.85
BDNF-216ENST00000532997 XPNPEP1Q9NQW7 623 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 WASF2Q9Y6W5 498 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 COL16A1Q07092 1604 aaPredicted RBP9.72□□□□□ -0.85
BDNF-216ENST00000532997 MEI4A8MW99 385 aa9.71□□□□□ -0.85
BDNF-216ENST00000532997 GPC4O75487 556 aa9.71□□□□□ -0.85
BDNF-216ENST00000532997 GCAP28676 217 aa9.71□□□□□ -0.85
BDNF-216ENST00000532997 RAB27AP51159 221 aa9.71□□□□□ -0.85
BDNF-216ENST00000532997 RPS6KA3P51812 740 aa9.71□□□□□ -0.85
BDNF-216ENST00000532997 RPL26P61254 145 aaKnown RBP9.71□□□□□ -0.85
BDNF-216ENST00000532997 RBP5P82980 135 aa9.71□□□□□ -0.85
BDNF-216ENST00000532997 MAPRE2Q15555 327 aa9.71□□□□□ -0.85
BDNF-216ENST00000532997 CCDC153Q494R4 210 aa9.71□□□□□ -0.85
BDNF-216ENST00000532997 PTPN20Q4JDL3 420 aa9.71□□□□□ -0.85
BDNF-216ENST00000532997 TTC7BQ86TV6 843 aa9.71□□□□□ -0.85
BDNF-216ENST00000532997 RSPH3Q86UC2 560 aa9.71□□□□□ -0.85
BDNF-216ENST00000532997 SLC4A11Q8NBS3 891 aa9.71□□□□□ -0.85
BDNF-216ENST00000532997 WDR60Q8WVS4 1066 aa9.71□□□□□ -0.85
BDNF-216ENST00000532997 EBNA1BP2Q99848 306 aaKnown RBP9.71□□□□□ -0.85
BDNF-216ENST00000532997 UPF3AQ9H1J1 476 aaKnown RBP9.71□□□□□ -0.85
BDNF-216ENST00000532997 CYLDQ9NQC7 956 aa9.71□□□□□ -0.85
BDNF-216ENST00000532997 ZNF862O60290 1169 aa9.71□□□□□ -0.86
BDNF-216ENST00000532997 APBA3O96018 575 aa9.71□□□□□ -0.86
BDNF-216ENST00000532997 SRGAP2BP0DMP2 458 aa9.71□□□□□ -0.86
BDNF-216ENST00000532997 AMPD1P23109 780 aa9.71□□□□□ -0.86
BDNF-216ENST00000532997 ACAT1P24752 427 aaKnown RBP9.71□□□□□ -0.86
BDNF-216ENST00000532997 NR2C2P49116 596 aa9.71□□□□□ -0.86
BDNF-216ENST00000532997 GDF10P55107 478 aa9.71□□□□□ -0.86
BDNF-216ENST00000532997 YWHAZP63104 245 aaKnown RBP9.71□□□□□ -0.86
BDNF-216ENST00000532997 FLOT2Q14254 428 aa9.71□□□□□ -0.86
BDNF-216ENST00000532997 TTLL6Q8N841 843 aa9.71□□□□□ -0.86
BDNF-216ENST00000532997 JOSD2Q8TAC2 188 aa9.71□□□□□ -0.86
BDNF-216ENST00000532997 PRPF31Q8WWY3 499 aaKnown RBP9.71□□□□□ -0.86
BDNF-216ENST00000532997 PYDC1Q8WXC3 89 aa9.71□□□□□ -0.86
BDNF-216ENST00000532997 CNTN6Q9UQ52 1028 aa9.71□□□□□ -0.86
BDNF-216ENST00000532997 STYXL1Q9Y6J8 313 aa9.71□□□□□ -0.86
BDNF-216ENST00000532997 KLHL33A6NCF5 533 aa9.71□□□□□ -0.86
BDNF-216ENST00000532997 VWA5AO00534 786 aa9.71□□□□□ -0.86
BDNF-216ENST00000532997 TMCC1O94876 653 aa9.71□□□□□ -0.86
BDNF-216ENST00000532997 PROCP04070 461 aa9.71□□□□□ -0.86
BDNF-216ENST00000532997 C6orf222P0C671 652 aaPredicted RBP9.71□□□□□ -0.86
BDNF-216ENST00000532997 HSPA8P11142 646 aaKnown RBP9.71□□□□□ -0.86
BDNF-216ENST00000532997 CPA3P15088 417 aa9.71□□□□□ -0.86
BDNF-216ENST00000532997 RAG1P15918 1043 aa9.71□□□□□ -0.86
BDNF-216ENST00000532997 RBL1P28749 1068 aa9.71□□□□□ -0.86
BDNF-216ENST00000532997 PSMC4P43686 418 aa9.71□□□□□ -0.86
BDNF-216ENST00000532997 SERPINB8P50452 374 aa9.71□□□□□ -0.86
BDNF-216ENST00000532997 CLDN10P78369 228 aa9.71□□□□□ -0.86
BDNF-216ENST00000532997 JAG1P78504 1218 aa9.71□□□□□ -0.86
BDNF-216ENST00000532997 FAM149B1Q96BN6 582 aa9.71□□□□□ -0.86
BDNF-216ENST00000532997 BTBD9Q96Q07 612 aa9.71□□□□□ -0.86
BDNF-216ENST00000532997 MECRQ9BV79 373 aa9.71□□□□□ -0.86
BDNF-216ENST00000532997 KLHL8Q9P2G9 620 aaPredicted RBP9.71□□□□□ -0.86
BDNF-216ENST00000532997 PCDHA11Q9Y5I1 949 aa9.71□□□□□ -0.86
BDNF-216ENST00000532997 STRCQ7RTU9 1775 aa9.7□□□□□ -0.86
BDNF-216ENST00000532997 EME2A4GXA9 379 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms