RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 BRD2P25440 801 aaKnown RBP18.7■□□□□ 0.58
SMG1-203ENST00000532700 ADIGQ0VDE8 80 aa18.7■□□□□ 0.58
SMG1-203ENST00000532700 KCNH2Q12809 1159 aa18.7■□□□□ 0.58
SMG1-203ENST00000532700 PAK1Q13153 545 aa18.7■□□□□ 0.58
SMG1-203ENST00000532700 SF3A2Q15428 464 aaKnown RBP18.7■□□□□ 0.58
SMG1-203ENST00000532700 CRY1Q16526 586 aa18.7■□□□□ 0.58
SMG1-203ENST00000532700 PLK5Q496M5 336 aa18.7■□□□□ 0.58
SMG1-203ENST00000532700 SGO2Q562F6 1265 aa18.7■□□□□ 0.58
SMG1-203ENST00000532700 ANO7Q6IWH7 933 aa18.7■□□□□ 0.58
SMG1-203ENST00000532700 KLHDC10Q6PID8 442 aa18.7■□□□□ 0.58
SMG1-203ENST00000532700 TMEM270Q6UE05 265 aa18.7■□□□□ 0.58
SMG1-203ENST00000532700 RASSF3Q86WH2 238 aa18.7■□□□□ 0.58
SMG1-203ENST00000532700 PPM1KQ8N3J5 372 aa18.7■□□□□ 0.58
SMG1-203ENST00000532700 CLEC4CQ8WTT0 213 aa18.7■□□□□ 0.58
SMG1-203ENST00000532700 SRRTQ9BXP5 876 aaKnown RBP18.7■□□□□ 0.58
SMG1-203ENST00000532700 DUSP15Q9H1R2 295 aaPredicted RBP18.7■□□□□ 0.58
SMG1-203ENST00000532700 ARRDC1-AS1Q9H2J1 176 aa18.7■□□□□ 0.58
SMG1-203ENST00000532700 CLIC5Q9NZA1 410 aa18.7■□□□□ 0.58
SMG1-203ENST00000532700 PLXND1Q9Y4D7 1925 aa18.7■□□□□ 0.58
SMG1-203ENST00000532700 ABCA7Q8IZY2 2146 aa18.7■□□□□ 0.58
SMG1-203ENST00000532700 CACNA1AO00555 2505 aa18.69■□□□□ 0.58
SMG1-203ENST00000532700 YJEFN3A6XGL0 299 aa18.69■□□□□ 0.58
SMG1-203ENST00000532700 PRRT4C9JH25 899 aa18.69■□□□□ 0.58
SMG1-203ENST00000532700 E7ENQ6 273 aa18.69■□□□□ 0.58
SMG1-203ENST00000532700 XPO1O14980 1071 aaKnown RBP18.69■□□□□ 0.58
SMG1-203ENST00000532700 PMM2O15305 246 aa18.69■□□□□ 0.58
SMG1-203ENST00000532700 CCDC192P0DO97 292 aa18.69■□□□□ 0.58
SMG1-203ENST00000532700 TYRP14679 529 aa18.69■□□□□ 0.58
SMG1-203ENST00000532700 GRIA2P42262 883 aa18.69■□□□□ 0.58
SMG1-203ENST00000532700 WASP42768 502 aa18.69■□□□□ 0.58
SMG1-203ENST00000532700 RGS7P49802 495 aa18.69■□□□□ 0.58
SMG1-203ENST00000532700 DGKEP52429 567 aa18.69■□□□□ 0.58
SMG1-203ENST00000532700 ZNF132P52740 706 aa18.69■□□□□ 0.58
SMG1-203ENST00000532700 BCAT1P54687 386 aa18.69■□□□□ 0.58
SMG1-203ENST00000532700 YWHAGP61981 247 aaKnown RBP eCLIP18.69■□□□□ 0.58
SMG1-203ENST00000532700 EGFLAMQ63HQ2 1017 aa18.69■□□□□ 0.58
SMG1-203ENST00000532700 PM20D1Q6GTS8 502 aa18.69■□□□□ 0.58
SMG1-203ENST00000532700 GJB7Q6PEY0 223 aa18.69■□□□□ 0.58
SMG1-203ENST00000532700 FOXR2Q6PJQ5 311 aa18.69■□□□□ 0.58
SMG1-203ENST00000532700 IRF2BP1Q8IU81 584 aa18.69■□□□□ 0.58
SMG1-203ENST00000532700 TTC39CQ8N584 583 aa18.69■□□□□ 0.58
SMG1-203ENST00000532700 TERB1Q8NA31 727 aa18.69■□□□□ 0.58
SMG1-203ENST00000532700 TSTD1Q8NFU3 115 aa18.69■□□□□ 0.58
SMG1-203ENST00000532700 NT5C1BQ96P26 610 aa18.69■□□□□ 0.58
SMG1-203ENST00000532700 BBS2Q9BXC9 721 aa18.69■□□□□ 0.58
SMG1-203ENST00000532700 GTPBP4Q9BZE4 634 aaKnown RBP18.69■□□□□ 0.58
SMG1-203ENST00000532700 UBXN6Q9BZV1 441 aa18.69■□□□□ 0.58
SMG1-203ENST00000532700 DNAJC17Q9NVM6 304 aaKnown RBP18.69■□□□□ 0.58
SMG1-203ENST00000532700 MARK1Q9P0L2 795 aa18.69■□□□□ 0.58
SMG1-203ENST00000532700 KIAA1468Q9P260 1216 aa18.69■□□□□ 0.58
SMG1-203ENST00000532700 EBF1Q9UH73 591 aa18.69■□□□□ 0.58
SMG1-203ENST00000532700 CLEC4EQ9ULY5 219 aa18.69■□□□□ 0.58
SMG1-203ENST00000532700 PCDHB4Q9Y5E5 795 aa18.69■□□□□ 0.58
SMG1-203ENST00000532700 THADAQ6YHU6 1953 aa18.69■□□□□ 0.58
SMG1-203ENST00000532700 NUP205Q92621 2012 aa18.69■□□□□ 0.58
SMG1-203ENST00000532700 GOLGA6L22H0YM25 854 aa18.68■□□□□ 0.58
SMG1-203ENST00000532700 CACNG3O60359 315 aa18.68■□□□□ 0.58
SMG1-203ENST00000532700 EPN2O95208 641 aa18.68■□□□□ 0.58
SMG1-203ENST00000532700 ZBED1O96006 694 aa18.68■□□□□ 0.58
SMG1-203ENST00000532700 CISD3P0C7P0 127 aa18.68■□□□□ 0.58
SMG1-203ENST00000532700 VDRP11473 427 aa18.68■□□□□ 0.58
SMG1-203ENST00000532700 TRIM21P19474 475 aaKnown RBP18.68■□□□□ 0.58
SMG1-203ENST00000532700 PLA2G4AP47712 749 aa18.68■□□□□ 0.58
SMG1-203ENST00000532700 MARSP56192 900 aaKnown RBP18.68■□□□□ 0.58
SMG1-203ENST00000532700 MRPS21P82921 87 aaKnown RBP18.68■□□□□ 0.58
SMG1-203ENST00000532700 BST2Q10589 180 aaKnown RBP18.68■□□□□ 0.58
SMG1-203ENST00000532700 C10orf76Q5T2E6 689 aa18.68■□□□□ 0.58
SMG1-203ENST00000532700 TCEAL6Q6IPX3 200 aa18.68■□□□□ 0.58
SMG1-203ENST00000532700 PMF1Q6P1K2 205 aa18.68■□□□□ 0.58
SMG1-203ENST00000532700 PRR23CQ6ZRP0 262 aa18.68■□□□□ 0.58
SMG1-203ENST00000532700 ZNF276Q8N554 614 aa18.68■□□□□ 0.58
SMG1-203ENST00000532700 RBBP8NLQ8NC74 664 aaPredicted RBP18.68■□□□□ 0.58
SMG1-203ENST00000532700 RLN3Q8WXF3 142 aa18.68■□□□□ 0.58
SMG1-203ENST00000532700 EDEM1Q92611 657 aa18.68■□□□□ 0.58
SMG1-203ENST00000532700 SECISBP2LQ93073 1101 aaKnown RBP18.68■□□□□ 0.58
SMG1-203ENST00000532700 TCEAL3Q969E4 200 aa18.68■□□□□ 0.58
SMG1-203ENST00000532700 EXOC4Q96A65 974 aa18.68■□□□□ 0.58
SMG1-203ENST00000532700 INTS2Q9H0H0 1204 aaKnown RBP18.68■□□□□ 0.58
SMG1-203ENST00000532700 CD248Q9HCU0 757 aa18.68■□□□□ 0.58
SMG1-203ENST00000532700 ACP6Q9NPH0 428 aa18.68■□□□□ 0.58
SMG1-203ENST00000532700 AJAP1Q9UKB5 411 aaPredicted RBP18.68■□□□□ 0.58
SMG1-203ENST00000532700 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.68■□□□□ 0.58
SMG1-203ENST00000532700 MUC22E2RYF6 1773 aaPredicted RBP18.68■□□□□ 0.58
SMG1-203ENST00000532700 BICDL2A1A5D9 508 aa18.67■□□□□ 0.58
SMG1-203ENST00000532700 MSI1O43347 362 aaKnown RBP18.67■□□□□ 0.58
SMG1-203ENST00000532700 TBXAS1P24557 533 aaPredicted RBP18.67■□□□□ 0.58
SMG1-203ENST00000532700 CORO1AP31146 461 aaKnown RBP18.67■□□□□ 0.58
SMG1-203ENST00000532700 PSEN1P49768 467 aa18.67■□□□□ 0.58
SMG1-203ENST00000532700 ATXN1P54253 815 aaKnown RBP18.67■□□□□ 0.58
SMG1-203ENST00000532700 LCLAT1Q6UWP7 414 aa18.67■□□□□ 0.58
SMG1-203ENST00000532700 CACNA2D4Q7Z3S7 1137 aa18.67■□□□□ 0.58
SMG1-203ENST00000532700 EHBP1Q8NDI1 1231 aa18.67■□□□□ 0.58
SMG1-203ENST00000532700 ZC3H10Q96K80 434 aaKnown RBP18.67■□□□□ 0.58
SMG1-203ENST00000532700 FAM124BQ9H5Z6 455 aaPredicted RBP18.67■□□□□ 0.58
SMG1-203ENST00000532700 MARCH2Q9P0N8 246 aa18.67■□□□□ 0.58
SMG1-203ENST00000532700 DEC1Q9P2X7 70 aa18.67■□□□□ 0.58
SMG1-203ENST00000532700 SFMBT1Q9UHJ3 866 aa18.67■□□□□ 0.58
SMG1-203ENST00000532700 AGO1Q9UL18 857 aaKnown RBP18.67■□□□□ 0.58
SMG1-203ENST00000532700 SLC12A8A0AV02 714 aa18.66■□□□□ 0.58
SMG1-203ENST00000532700 TBC1D3BA6NDS4 549 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms