RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 NUDT5Q9UKK9 219 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 USP15Q9Y4E8 981 aaPredicted RBP15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 HES2Q9Y543 173 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 MYO1GB0I1T2 1018 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 CCR1P32246 355 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 IQSEC1Q6DN90 963 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 CAPN10Q9HC96 672 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 SNCAIPQ9Y6H5 919 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 PHLPP1O60346 1717 aa15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 GJB6O95452 261 aa15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 MLNP12872 115 aa15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 SERPINB10P48595 397 aa15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 ZNF557Q8N988 423 aaPredicted RBP15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 SYNPO2Q9UMS6 1093 aa15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 SMIM10L2AP0DMW4 78 aa15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 SMIM10L2BP0DMW5 78 aa15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 C16orf59Q7L2K0 433 aa15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 ZNF438Q7Z4V0 828 aa15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 SCUBE3Q8IX30 993 aa15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 AGGF1Q8N302 714 aaeCLIP15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 NOA1Q8NC60 698 aaKnown RBP15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 C17orf80Q9BSJ5 609 aa15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 TMEM121Q9BTD3 319 aa15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 NT5MQ9NPB1 228 aa15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 DYRK1BQ9Y463 629 aa15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 BAZ2BQ9UIF8 2168 aaKnown RBP15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 CAND2O75155 1236 aa15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 GLRA3O75311 464 aa15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 NBPF20Q3BBV1 942 aa15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 PALB2Q86YC2 1186 aa15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 WDR18Q9BV38 432 aa15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 KCTD10Q9H3F6 313 aa15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 RNF112Q9ULX5 631 aa15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 EIF4E1BA6NMX2 242 aaKnown RBP15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 TRIM49D1C9J1S8 452 aa15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 TBC1D4O60343 1298 aa15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 PRIM2P49643 509 aa15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 OTUD4Q01804 1114 aaKnown RBP15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 C16orf87Q6PH81 154 aa15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 CEP70Q8NHQ1 597 aa15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 LPPQ93052 612 aa15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 XPO6Q96QU8 1125 aaKnown RBP15.23■□□□□ 0.03
PCDHA9-202ENST00000532602 ZW10O43264 779 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 KRT8P05787 483 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 DNAJC7Q99615 494 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 ATXN3LQ9H3M9 355 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 TUFMP49411 452 aaKnown RBP15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 RAD23BP54727 409 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 DLG4P78352 724 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 FIGNQ5HY92 759 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 GRAMD4Q6IC98 578 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 ZPBP2Q6X784 338 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 HORMAD1Q86X24 394 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 ZDHHC17Q8IUH5 632 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 ABTB1Q969K4 478 aaPredicted RBP15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 WNK4Q96J92 1243 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 PIH1D1Q9NWS0 290 aaKnown RBP15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 BARX2Q9UMQ3 279 aaPredicted RBP15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 SCAMP3O14828 347 aaKnown RBP15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 SP3Q02447 781 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 DSG4Q86SJ6 1040 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 FICDQ9BVA6 458 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 TBC1D13Q9NVG8 400 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 CAPN6Q9Y6Q1 641 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 SIGLEC1Q9BZZ2 1709 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 GSNP06396 782 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 DARSP14868 501 aaKnown RBP15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 STX5Q13190 355 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 TMED1Q13445 227 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 MFSD4BQ5TF39 518 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 MMGT1Q8N4V1 131 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 C3orf20Q8ND61 904 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 GLIS3Q8NEA6 775 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 IL31RAQ8NI17 732 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 ILKAPQ9H0C8 392 aaPredicted RBP15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 ADNPQ9H2P0 1102 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 RTN3O95197 1032 aaPredicted RBP15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 BDNFP23560 247 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 CNGA3Q16281 694 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 RGMBQ6NW40 437 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 PNKPQ96T60 521 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 GAD1Q99259 594 aa15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 ZCCHC2Q9C0B9 1178 aaKnown RBP15.22■□□□□ 0.03
PCDHA9-202ENST00000532602 DGKIO75912 1065 aa15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 GUCA1CO95843 209 aa15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 IGFBP4P22692 258 aa15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 SERPINB8P50452 374 aa15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 DDX39BQ13838 428 aaKnown RBP15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 PAWRQ96IZ0 340 aaKnown RBP15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 TBCBQ99426 244 aa15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 IL1RL2Q9HB29 575 aa15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 AFDNP55196 1824 aaKnown RBP15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 MAN1A2O60476 641 aa15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 SUPT7LO94864 414 aa15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 APOA1P02647 267 aa15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 ITGA9Q13797 1035 aa15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 LVRNQ6Q4G3 990 aa15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 SUGP1Q8IWZ8 645 aaKnown RBP15.21■□□□□ 0.03
PCDHA9-202ENST00000532602 ZFYVE19Q96K21 471 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms