RNA–Protein interactions for RNA: ENST00000532406.1

KNL1-210, Transcript of kinetochore scaffold 1, humanhuman

TSL 3

Gene KNL1, Length 579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-210ENST00000532406 C11orf54Q9H0W9 315 aaPredicted RBP5.33□□□□□ -1.56
KNL1-210ENST00000532406 VPS11Q9H270 941 aa5.33□□□□□ -1.56
KNL1-210ENST00000532406 LDAHQ9H6V9 325 aa5.33□□□□□ -1.56
KNL1-210ENST00000532406 MSL2Q9HCI7 577 aa5.33□□□□□ -1.56
KNL1-210ENST00000532406 SH3GLB2Q9NR46 395 aa5.33□□□□□ -1.56
KNL1-210ENST00000532406 SAMSN1Q9NSI8 373 aaKnown RBP5.33□□□□□ -1.56
KNL1-210ENST00000532406 RLIMQ9NVW2 624 aa5.33□□□□□ -1.56
KNL1-210ENST00000532406 AFF4Q9UHB7 1163 aaKnown RBP5.33□□□□□ -1.56
KNL1-210ENST00000532406 CPA4Q9UI42 421 aa5.33□□□□□ -1.56
KNL1-210ENST00000532406 RWDD2AQ9UIY3 292 aa5.33□□□□□ -1.56
KNL1-210ENST00000532406 CDC23Q9UJX2 597 aa5.33□□□□□ -1.56
KNL1-210ENST00000532406 PCDHA6Q9UN73 950 aa5.33□□□□□ -1.56
KNL1-210ENST00000532406 KCNJ14Q9UNX9 436 aa5.33□□□□□ -1.56
KNL1-210ENST00000532406 ACTL7AQ9Y615 435 aa5.33□□□□□ -1.56
KNL1-210ENST00000532406 ABCA3Q99758 1704 aa5.33□□□□□ -1.56
KNL1-210ENST00000532406 ITGB4P16144 1822 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 A0A1W2PPC4 97 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 ETV2O00321 342 aaPredicted RBP5.32□□□□□ -1.56
KNL1-210ENST00000532406 WNT10BO00744 389 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 MFAP3LO75121 409 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 MATN4O95460 622 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 CYP1A1P04798 512 aaPredicted RBP5.32□□□□□ -1.56
KNL1-210ENST00000532406 PARP1P09874 1014 aaKnown RBP5.32□□□□□ -1.56
KNL1-210ENST00000532406 SRGNP10124 158 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 MTHFD1P11586 935 aaKnown RBP5.32□□□□□ -1.56
KNL1-210ENST00000532406 ABCB4P21439 1286 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 LONP1P36776 959 aaKnown RBP5.32□□□□□ -1.56
KNL1-210ENST00000532406 IGHMBP2P38935 993 aaKnown RBP5.32□□□□□ -1.56
KNL1-210ENST00000532406 TDO2P48775 406 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 GZMKP49863 264 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 IRAK1P51617 712 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 SUMO3P55854 103 aaPredicted RBP5.32□□□□□ -1.56
KNL1-210ENST00000532406 SOX8P57073 446 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 GNG11P61952 73 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 AKAP17AQ02040 695 aaKnown RBP5.32□□□□□ -1.56
KNL1-210ENST00000532406 TNFAIP2Q03169 654 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 CHRNDQ07001 517 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 KCTD2Q14681 263 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 KCNB1Q14721 858 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 PDCD2Q16342 344 aaPredicted RBP5.32□□□□□ -1.56
KNL1-210ENST00000532406 WHAMMP3Q1A5X7 153 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 FILIP1LQ4L180 1135 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 MFSD14BQ5SR56 506 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 GALNT17Q6IS24 598 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 RAD9BQ6WBX8 426 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 SEM1Q6ZVN7 128 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 TMTC3Q6ZXV5 915 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 CNGA4Q8IV77 575 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 CMTM4Q8IZR5 234 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 IQUBQ8NA54 791 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 TXNDC5Q8NBS9 432 aaKnown RBP5.32□□□□□ -1.56
KNL1-210ENST00000532406 ZSCAN18Q8TBC5 510 aaPredicted RBP5.32□□□□□ -1.56
KNL1-210ENST00000532406 GOLGA1Q92805 767 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 TRIM63Q969Q1 353 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 KIAA1191Q96A73 305 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 SKA1Q96BD8 255 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 ARL8AQ96BM9 186 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 PARD6BQ9BYG5 372 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 KCNH6Q9H252 994 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 ADAM7Q9H2U9 754 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 MRPL44Q9H9J2 332 aaKnown RBP5.32□□□□□ -1.56
KNL1-210ENST00000532406 ATP8A2Q9NTI2 1148 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 TCP11L1Q9NUJ3 509 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 STK32BQ9NY57 414 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 FAM30AQ9NZY2 134 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 COL20A1Q9P218 1284 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.32□□□□□ -1.56
KNL1-210ENST00000532406 ZHX1Q9UKY1 873 aaPredicted RBP5.32□□□□□ -1.56
KNL1-210ENST00000532406 NHSL1Q5SYE7 1610 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 MYO5AQ9Y4I1 1855 aaKnown RBP5.32□□□□□ -1.56
KNL1-210ENST00000532406 ECM29Q5VYK3 1845 aa5.32□□□□□ -1.56
KNL1-210ENST00000532406 PLCH1Q4KWH8 1693 aa5.31□□□□□ -1.56
KNL1-210ENST00000532406 F8W8V4 182 aa5.31□□□□□ -1.56
KNL1-210ENST00000532406 TULP2O00295 520 aa5.31□□□□□ -1.56
KNL1-210ENST00000532406 PJA2O43164 708 aa5.31□□□□□ -1.56
KNL1-210ENST00000532406 RPS6KA5O75582 802 aa5.31□□□□□ -1.56
KNL1-210ENST00000532406 CALML3P27482 149 aa5.31□□□□□ -1.56
KNL1-210ENST00000532406 CASRP41180 1078 aa5.31□□□□□ -1.56
KNL1-210ENST00000532406 PRPHP41219 470 aa5.31□□□□□ -1.56
KNL1-210ENST00000532406 ARHGAP25P42331 645 aa5.31□□□□□ -1.56
KNL1-210ENST00000532406 COPB1P53618 953 aaKnown RBP5.31□□□□□ -1.56
KNL1-210ENST00000532406 RRADP55042 308 aa5.31□□□□□ -1.56
KNL1-210ENST00000532406 HTRA4P83105 476 aaPredicted RBP5.31□□□□□ -1.56
KNL1-210ENST00000532406 APBA1Q02410 837 aa5.31□□□□□ -1.56
KNL1-210ENST00000532406 MRPL49Q13405 166 aaKnown RBP5.31□□□□□ -1.56
KNL1-210ENST00000532406 SSPNQ14714 243 aa5.31□□□□□ -1.56
KNL1-210ENST00000532406 KIF22Q14807 665 aa5.31□□□□□ -1.56
KNL1-210ENST00000532406 TBR1Q16650 682 aa5.31□□□□□ -1.56
KNL1-210ENST00000532406 PFKFB3Q16875 520 aaPredicted RBP5.31□□□□□ -1.56
KNL1-210ENST00000532406 TUBB8Q3ZCM7 444 aa5.31□□□□□ -1.56
KNL1-210ENST00000532406 EARS2Q5JPH6 523 aaKnown RBP5.31□□□□□ -1.56
KNL1-210ENST00000532406 SPECC1Q5M775 1068 aa5.31□□□□□ -1.56
KNL1-210ENST00000532406 BEND6Q5SZJ8 279 aaPredicted RBP5.31□□□□□ -1.56
KNL1-210ENST00000532406 TEX35Q5T0J7 233 aa5.31□□□□□ -1.56
KNL1-210ENST00000532406 ZNF658Q5TYW1 1059 aaPredicted RBP5.31□□□□□ -1.56
KNL1-210ENST00000532406 AFMIDQ63HM1 303 aa5.31□□□□□ -1.56
KNL1-210ENST00000532406 HIBCHQ6NVY1 386 aaPredicted RBP5.31□□□□□ -1.56
KNL1-210ENST00000532406 WDR93Q6P2C0 686 aa5.31□□□□□ -1.56
KNL1-210ENST00000532406 CTR9Q6PD62 1173 aa5.31□□□□□ -1.56
KNL1-210ENST00000532406 FOXR2Q6PJQ5 311 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms