RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 TXNL4AP83876 142 aaKnown RBP5.37□□□□□ -1.55
PTPRK-220ENST00000531466 STK3Q13188 491 aa5.37□□□□□ -1.55
PTPRK-220ENST00000531466 TFAP2DQ7Z6R9 452 aa5.37□□□□□ -1.55
PTPRK-220ENST00000531466 FAM71DQ8N9W8 422 aa5.37□□□□□ -1.55
PTPRK-220ENST00000531466 PPP1R35Q8TAP8 253 aa5.37□□□□□ -1.55
PTPRK-220ENST00000531466 FAM84BQ96KN1 310 aaPredicted RBP5.37□□□□□ -1.55
PTPRK-220ENST00000531466 ARHGAP39Q9C0H5 1083 aa5.37□□□□□ -1.55
PTPRK-220ENST00000531466 MYLK2Q9H1R3 596 aa5.37□□□□□ -1.55
PTPRK-220ENST00000531466 AGO4Q9HCK5 861 aaKnown RBP5.37□□□□□ -1.55
PTPRK-220ENST00000531466 PCDHA12Q9UN75 941 aa5.37□□□□□ -1.55
PTPRK-220ENST00000531466 TLX3O43711 291 aaPredicted RBP5.36□□□□□ -1.55
PTPRK-220ENST00000531466 PIAS2O75928 621 aa5.36□□□□□ -1.55
PTPRK-220ENST00000531466 GAS8-AS1O95177 125 aa5.36□□□□□ -1.55
PTPRK-220ENST00000531466 CD19P15391 556 aa5.36□□□□□ -1.55
PTPRK-220ENST00000531466 EN2P19622 333 aaPredicted RBP5.36□□□□□ -1.55
PTPRK-220ENST00000531466 NTSR1P30989 418 aa5.36□□□□□ -1.55
PTPRK-220ENST00000531466 HOXA7P31268 230 aaPredicted RBP5.36□□□□□ -1.55
PTPRK-220ENST00000531466 PTGR1Q14914 329 aa5.36□□□□□ -1.55
PTPRK-220ENST00000531466 DGKKQ5KSL6 1271 aa5.36□□□□□ -1.55
PTPRK-220ENST00000531466 NR2C2APQ86WQ0 139 aa5.36□□□□□ -1.55
PTPRK-220ENST00000531466 FBXL14Q8N1E6 418 aa5.36□□□□□ -1.55
PTPRK-220ENST00000531466 PIGKQ92643 395 aa5.36□□□□□ -1.55
PTPRK-220ENST00000531466 MIB2Q96AX9 1013 aa5.36□□□□□ -1.55
PTPRK-220ENST00000531466 VPS50Q96JG6 964 aa5.36□□□□□ -1.55
PTPRK-220ENST00000531466 TCF7L1Q9HCS4 588 aa5.36□□□□□ -1.55
PTPRK-220ENST00000531466 SELENONQ9NZV5 590 aa5.36□□□□□ -1.55
PTPRK-220ENST00000531466 F8W810 466 aa5.35□□□□□ -1.55
PTPRK-220ENST00000531466 H3BML4 177 aa5.35□□□□□ -1.55
PTPRK-220ENST00000531466 CCP110O43303 1012 aa5.35□□□□□ -1.55
PTPRK-220ENST00000531466 ZC3H11AO75152 810 aaKnown RBP eCLIP5.35□□□□□ -1.55
PTPRK-220ENST00000531466 RASSF9O75901 435 aa5.35□□□□□ -1.55
PTPRK-220ENST00000531466 SLC7A1P30825 629 aa5.35□□□□□ -1.55
PTPRK-220ENST00000531466 JAK3P52333 1124 aa5.35□□□□□ -1.55
PTPRK-220ENST00000531466 NUGGCQ68CJ6 796 aa5.35□□□□□ -1.55
PTPRK-220ENST00000531466 USP49Q70CQ1 688 aa5.35□□□□□ -1.55
PTPRK-220ENST00000531466 MICU3Q86XE3 530 aa5.35□□□□□ -1.55
PTPRK-220ENST00000531466 SLC44A5Q8NCS7 719 aa5.35□□□□□ -1.55
PTPRK-220ENST00000531466 DNASE2BQ8WZ79 361 aa5.35□□□□□ -1.55
PTPRK-220ENST00000531466 ATP2A3Q93084 1043 aa5.35□□□□□ -1.55
PTPRK-220ENST00000531466 TUBB6Q9BUF5 446 aa5.35□□□□□ -1.55
PTPRK-220ENST00000531466 ANKRD6Q9Y2G4 727 aa5.35□□□□□ -1.55
PTPRK-220ENST00000531466 C16orf96A6NNT2 1141 aa5.34□□□□□ -1.55
PTPRK-220ENST00000531466 TBX3O15119 743 aa5.34□□□□□ -1.55
PTPRK-220ENST00000531466 PHGDHO43175 533 aaKnown RBP5.34□□□□□ -1.55
PTPRK-220ENST00000531466 KRT10P13645 584 aa5.34□□□□□ -1.55
PTPRK-220ENST00000531466 RPS6KB1P23443 525 aa5.34□□□□□ -1.55
PTPRK-220ENST00000531466 HOXA11P31270 313 aaPredicted RBP5.34□□□□□ -1.55
PTPRK-220ENST00000531466 GALNSP34059 522 aa5.34□□□□□ -1.55
PTPRK-220ENST00000531466 MTA1Q13330 715 aa5.34□□□□□ -1.55
PTPRK-220ENST00000531466 ST3GAL2Q16842 350 aa5.34□□□□□ -1.55
PTPRK-220ENST00000531466 IL31RAQ8NI17 732 aa5.34□□□□□ -1.55
PTPRK-220ENST00000531466 BCAS4Q8TDM0 211 aa5.34□□□□□ -1.55
PTPRK-220ENST00000531466 NUDCD2Q8WVJ2 157 aa5.34□□□□□ -1.55
PTPRK-220ENST00000531466 NEUROG1Q92886 237 aa5.34□□□□□ -1.55
PTPRK-220ENST00000531466 MSI2Q96DH6 328 aaKnown RBP5.34□□□□□ -1.55
PTPRK-220ENST00000531466 PRR11Q96HE9 360 aaPredicted RBP5.34□□□□□ -1.55
PTPRK-220ENST00000531466 STK31Q9BXU1 1019 aa5.34□□□□□ -1.55
PTPRK-220ENST00000531466 ATP6V0A4Q9HBG4 840 aa5.34□□□□□ -1.55
PTPRK-220ENST00000531466 AASDHPPTQ9NRN7 309 aa5.34□□□□□ -1.55
PTPRK-220ENST00000531466 STEAP1Q9UHE8 339 aa5.34□□□□□ -1.55
PTPRK-220ENST00000531466 SBNO2Q9Y2G9 1366 aa5.33□□□□□ -1.56
PTPRK-220ENST00000531466 TRBV5-3A0A0A0MS03 114 aa5.33□□□□□ -1.56
PTPRK-220ENST00000531466 MBD3L4A6NDZ8 208 aaPredicted RBP5.33□□□□□ -1.56
PTPRK-220ENST00000531466 MBD3L3A6NE82 208 aaPredicted RBP5.33□□□□□ -1.56
PTPRK-220ENST00000531466 PYCARD-AS1I3L0S3 204 aa5.33□□□□□ -1.56
PTPRK-220ENST00000531466 UGDHO60701 494 aa5.33□□□□□ -1.56
PTPRK-220ENST00000531466 ST6GAL1P15907 406 aa5.33□□□□□ -1.56
PTPRK-220ENST00000531466 POLD2P49005 469 aa5.33□□□□□ -1.56
PTPRK-220ENST00000531466 SLC12A2P55011 1212 aa5.33□□□□□ -1.56
PTPRK-220ENST00000531466 EIF4A1P60842 406 aaKnown RBP5.33□□□□□ -1.56
PTPRK-220ENST00000531466 WDR5P61964 334 aaKnown RBP5.33□□□□□ -1.56
PTPRK-220ENST00000531466 CCDC15Q0P6D6 951 aa5.33□□□□□ -1.56
PTPRK-220ENST00000531466 NFATC4Q14934 902 aa5.33□□□□□ -1.56
PTPRK-220ENST00000531466 CLEC9AQ6UXN8 241 aa5.33□□□□□ -1.56
PTPRK-220ENST00000531466 NR4A3Q92570 626 aa5.33□□□□□ -1.56
PTPRK-220ENST00000531466 NTPCRQ9BSD7 190 aaKnown RBP5.33□□□□□ -1.56
PTPRK-220ENST00000531466 MOV10Q9HCE1 1003 aaKnown RBP5.33□□□□□ -1.56
PTPRK-220ENST00000531466 STK32BQ9NY57 414 aa5.33□□□□□ -1.56
PTPRK-220ENST00000531466 SEMA5BQ9P283 1151 aa5.33□□□□□ -1.56
PTPRK-220ENST00000531466 ANAPC4Q9UJX5 808 aa5.33□□□□□ -1.56
PTPRK-220ENST00000531466 HDAC9Q9UKV0 1011 aa5.33□□□□□ -1.56
PTPRK-220ENST00000531466 RAB27BO00194 218 aa5.32□□□□□ -1.56
PTPRK-220ENST00000531466 AKAP10O43572 662 aa5.32□□□□□ -1.56
PTPRK-220ENST00000531466 FGF3P11487 239 aaPredicted RBP5.32□□□□□ -1.56
PTPRK-220ENST00000531466 TBXAS1P24557 533 aaPredicted RBP5.32□□□□□ -1.56
PTPRK-220ENST00000531466 KLRC1P26715 233 aa5.32□□□□□ -1.56
PTPRK-220ENST00000531466 ARHGEF7Q14155 803 aa5.32□□□□□ -1.56
PTPRK-220ENST00000531466 BRDTQ58F21 947 aaPredicted RBP5.32□□□□□ -1.56
PTPRK-220ENST00000531466 B3GNT9Q6UX72 402 aa5.32□□□□□ -1.56
PTPRK-220ENST00000531466 RBM44Q6ZP01 1051 aaKnown RBP5.32□□□□□ -1.56
PTPRK-220ENST00000531466 SPATA2LQ8IUW3 424 aaPredicted RBP5.32□□□□□ -1.56
PTPRK-220ENST00000531466 OIT3Q8WWZ8 545 aa5.32□□□□□ -1.56
PTPRK-220ENST00000531466 JPH3Q8WXH2 748 aaPredicted RBP5.32□□□□□ -1.56
PTPRK-220ENST00000531466 HOOK2Q96ED9 719 aa5.32□□□□□ -1.56
PTPRK-220ENST00000531466 MED30Q96HR3 178 aa5.32□□□□□ -1.56
PTPRK-220ENST00000531466 HIST1H2AAQ96QV6 131 aa5.32□□□□□ -1.56
PTPRK-220ENST00000531466 CINPQ9BW66 212 aaPredicted RBP5.32□□□□□ -1.56
PTPRK-220ENST00000531466 RBM38Q9H0Z9 239 aaKnown RBP5.32□□□□□ -1.56
PTPRK-220ENST00000531466 PAPOLBQ9NRJ5 636 aaKnown RBP5.32□□□□□ -1.56
PTPRK-220ENST00000531466 VPS45Q9NRW7 570 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 236.5 ms