RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 PGFP49763 221 aa9.76□□□□□ -0.85
NEDD8-206ENST00000531430 ARID5AQ03989 594 aa9.76□□□□□ -0.85
NEDD8-206ENST00000531430 SUZ12Q15022 739 aaKnown RBP9.76□□□□□ -0.85
NEDD8-206ENST00000531430 HLA-BQ31612 363 aa9.76□□□□□ -0.85
NEDD8-206ENST00000531430 HTR3DQ70Z44 454 aa9.76□□□□□ -0.85
NEDD8-206ENST00000531430 FAM35AQ86V20 835 aa9.76□□□□□ -0.85
NEDD8-206ENST00000531430 TMPRSS6Q8IU80 811 aa9.76□□□□□ -0.85
NEDD8-206ENST00000531430 ZNF516Q92618 1163 aa9.76□□□□□ -0.85
NEDD8-206ENST00000531430 PRCCQ92733 491 aaPredicted RBP9.76□□□□□ -0.85
NEDD8-206ENST00000531430 SYAP1Q96A49 352 aaPredicted RBP9.76□□□□□ -0.85
NEDD8-206ENST00000531430 SIPA1Q96FS4 1042 aa9.76□□□□□ -0.85
NEDD8-206ENST00000531430 TNIP3Q96KP6 325 aa9.76□□□□□ -0.85
NEDD8-206ENST00000531430 BBC3Q96PG8 261 aaPredicted RBP9.76□□□□□ -0.85
NEDD8-206ENST00000531430 KLF16Q9BXK1 252 aaPredicted RBP9.76□□□□□ -0.85
NEDD8-206ENST00000531430 SMYD3Q9H7B4 428 aa9.76□□□□□ -0.85
NEDD8-206ENST00000531430 ITM2CQ9NQX7 267 aa9.76□□□□□ -0.85
NEDD8-206ENST00000531430 TLR8Q9NR97 1041 aaKnown RBP9.76□□□□□ -0.85
NEDD8-206ENST00000531430 EIF2B4Q9UI10 523 aaKnown RBP9.76□□□□□ -0.85
NEDD8-206ENST00000531430 PCOLCE2Q9UKZ9 415 aa9.76□□□□□ -0.85
NEDD8-206ENST00000531430 GCN1Q92616 2671 aaKnown RBP9.76□□□□□ -0.85
NEDD8-206ENST00000531430 KNL1Q8NG31 2342 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 A0A1B0GVT2 93 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 KCNJ18B7U540 433 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 CILPO75339 1184 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 GJB3O75712 270 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 BEST1O76090 585 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 CD2BP2O95400 341 aaKnown RBP9.75□□□□□ -0.85
NEDD8-206ENST00000531430 CER1O95813 267 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 CISD3P0C7P0 127 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 RARGP13631 454 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 CCDC130P13994 396 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 OXTRP30559 389 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 CASP4P49662 377 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 CSNK1EP49674 416 aaKnown RBP9.75□□□□□ -0.85
NEDD8-206ENST00000531430 ASIC1P78348 528 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 PSMD6Q15008 389 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 FUT11Q495W5 492 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 ZNF667Q5HYK9 610 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 C10orf120Q5SQS8 335 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 IL27RAQ6UWB1 636 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 PAQR9Q6ZVX9 377 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 XXYLT1Q8NBI6 393 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 SLC2A14Q8TDB8 520 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 UCMAQ8WVF2 138 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 SMARCD1Q96GM5 515 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 CRELD1Q96HD1 420 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 CGRRF1Q99675 332 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 CDC6Q99741 560 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 GABRG3Q99928 467 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 NUP58Q9BVL2 599 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 CIPCQ9C0C6 399 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 LRRC27Q9C0I9 530 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 FBXO44Q9H4M3 255 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 KRT82Q9NSB4 513 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 FAM49BQ9NUQ9 324 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 COMMD8Q9NX08 183 aa9.75□□□□□ -0.85
NEDD8-206ENST00000531430 WSB2Q9NYS7 404 aaPredicted RBP9.75□□□□□ -0.85
NEDD8-206ENST00000531430 IGSF10Q6WRI0 2623 aa9.74□□□□□ -0.85
NEDD8-206ENST00000531430 PLXNB3Q9ULL4 1909 aa9.74□□□□□ -0.85
NEDD8-206ENST00000531430 A0A087X0B3 334 aa9.74□□□□□ -0.85
NEDD8-206ENST00000531430 A0A1W2PQH9 124 aa9.74□□□□□ -0.85
NEDD8-206ENST00000531430 METTL12A8MUP2 240 aa9.74□□□□□ -0.85
NEDD8-206ENST00000531430 CACNG3O60359 315 aa9.74□□□□□ -0.85
NEDD8-206ENST00000531430 EXOC3O60645 756 aa9.74□□□□□ -0.85
NEDD8-206ENST00000531430 ACO1P21399 889 aaKnown RBP9.74□□□□□ -0.85
NEDD8-206ENST00000531430 ATICP31939 592 aa9.74□□□□□ -0.85
NEDD8-206ENST00000531430 HOXD13P35453 343 aa9.74□□□□□ -0.85
NEDD8-206ENST00000531430 IL12RB1P42701 662 aa9.74□□□□□ -0.85
NEDD8-206ENST00000531430 PLA2G4AP47712 749 aa9.74□□□□□ -0.85
NEDD8-206ENST00000531430 TPMTP51580 245 aa9.74□□□□□ -0.85
NEDD8-206ENST00000531430 CYP24A1Q07973 514 aa9.74□□□□□ -0.85
NEDD8-206ENST00000531430 ZNF699Q32M78 642 aa9.74□□□□□ -0.85
NEDD8-206ENST00000531430 SNX30Q5VWJ9 437 aa9.74□□□□□ -0.85
NEDD8-206ENST00000531430 TMPRSS7Q7RTY8 843 aa9.74□□□□□ -0.85
NEDD8-206ENST00000531430 C12orf29Q8N999 325 aa9.74□□□□□ -0.85
NEDD8-206ENST00000531430 PIP4K2CQ8TBX8 421 aa9.74□□□□□ -0.85
NEDD8-206ENST00000531430 DNASE2BQ8WZ79 361 aa9.74□□□□□ -0.85
NEDD8-206ENST00000531430 DHX58Q96C10 678 aa9.74□□□□□ -0.85
NEDD8-206ENST00000531430 SMOQ99835 787 aa9.74□□□□□ -0.85
NEDD8-206ENST00000531430 MKRN2Q9H000 416 aaKnown RBP9.74□□□□□ -0.85
NEDD8-206ENST00000531430 AGPAT3Q9NRZ7 376 aa9.74□□□□□ -0.85
NEDD8-206ENST00000531430 KIAA1522Q9P206 1035 aaPredicted RBP9.74□□□□□ -0.85
NEDD8-206ENST00000531430 NAGPAQ9UK23 515 aa9.74□□□□□ -0.85
NEDD8-206ENST00000531430 FNDC3AQ9Y2H6 1198 aaKnown RBP9.74□□□□□ -0.85
NEDD8-206ENST00000531430 FREM2Q5SZK8 3169 aa9.74□□□□□ -0.85
NEDD8-206ENST00000531430 MYH10P35580 1976 aa9.74□□□□□ -0.85
NEDD8-206ENST00000531430 APC2O95996 2303 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 FRMD3A2A2Y4 597 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 GFRA2O00451 464 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 CYP26A1O43174 497 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 CBFA2T3O75081 653 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 FSBPO95073 299 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 PRB1P04280 392 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 EPHX1P07099 455 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 ZDHHC11BP0C7U3 371 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 FAM200BP0CF97 657 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 P4HA1P13674 534 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 TRIM21P19474 475 aaKnown RBP9.73□□□□□ -0.85
NEDD8-206ENST00000531430 TUBP50607 506 aa9.73□□□□□ -0.85
NEDD8-206ENST00000531430 NDST1P52848 882 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms