RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 ZBTB24O43167 697 aaPredicted RBP23.43■■□□□ 1.34
TRAPPC4-210ENST00000531290 CHRM1P11229 460 aaPredicted RBP23.43■■□□□ 1.34
TRAPPC4-210ENST00000531290 TYRP14679 529 aa23.43■■□□□ 1.34
TRAPPC4-210ENST00000531290 RAD23BP54727 409 aa23.43■■□□□ 1.34
TRAPPC4-210ENST00000531290 ANKRD40Q6AI12 368 aa23.43■■□□□ 1.34
TRAPPC4-210ENST00000531290 TCEAL6Q6IPX3 200 aa23.43■■□□□ 1.34
TRAPPC4-210ENST00000531290 SDE2Q6IQ49 451 aa23.43■■□□□ 1.34
TRAPPC4-210ENST00000531290 MIB1Q86YT6 1006 aa23.43■■□□□ 1.34
TRAPPC4-210ENST00000531290 ARHGAP18Q8N392 663 aa23.43■■□□□ 1.34
TRAPPC4-210ENST00000531290 ZNF276Q8N554 614 aa23.43■■□□□ 1.34
TRAPPC4-210ENST00000531290 OLIG1Q8TAK6 271 aa23.43■■□□□ 1.34
TRAPPC4-210ENST00000531290 HMGB4Q8WW32 186 aa23.43■■□□□ 1.34
TRAPPC4-210ENST00000531290 TCEAL3Q969E4 200 aa23.43■■□□□ 1.34
TRAPPC4-210ENST00000531290 ARID3AQ99856 593 aa23.43■■□□□ 1.34
TRAPPC4-210ENST00000531290 TCRBV21S2A2A0A5A6 115 aa23.42■■□□□ 1.34
TRAPPC4-210ENST00000531290 TRIM24O15164 1050 aa23.42■■□□□ 1.34
TRAPPC4-210ENST00000531290 ADRB1P08588 477 aa23.42■■□□□ 1.34
TRAPPC4-210ENST00000531290 BCKDHBP21953 392 aa23.42■■□□□ 1.34
TRAPPC4-210ENST00000531290 DHPSP49366 369 aaPredicted RBP23.42■■□□□ 1.34
TRAPPC4-210ENST00000531290 COG7P83436 770 aa23.42■■□□□ 1.34
TRAPPC4-210ENST00000531290 CBWD6Q4V339 395 aa23.42■■□□□ 1.34
TRAPPC4-210ENST00000531290 CBWD3Q5JTY5 395 aa23.42■■□□□ 1.34
TRAPPC4-210ENST00000531290 CBWD5Q5RIA9 395 aa23.42■■□□□ 1.34
TRAPPC4-210ENST00000531290 RNF43Q68DV7 783 aa23.42■■□□□ 1.34
TRAPPC4-210ENST00000531290 ARHGAP17Q68EM7 881 aa23.42■■□□□ 1.34
TRAPPC4-210ENST00000531290 LPCAT2Q7L5N7 544 aa23.42■■□□□ 1.34
TRAPPC4-210ENST00000531290 ANKRD52Q8NB46 1076 aa23.42■■□□□ 1.34
TRAPPC4-210ENST00000531290 ENGASEQ8NFI3 743 aa23.42■■□□□ 1.34
TRAPPC4-210ENST00000531290 RLN3Q8WXF3 142 aa23.42■■□□□ 1.34
TRAPPC4-210ENST00000531290 MARK1Q9P0L2 795 aa23.42■■□□□ 1.34
TRAPPC4-210ENST00000531290 ARMCX3Q9UH62 379 aaPredicted RBP23.42■■□□□ 1.34
TRAPPC4-210ENST00000531290 ZNF510Q9Y2H8 683 aa23.42■■□□□ 1.34
TRAPPC4-210ENST00000531290 STARD13Q9Y3M8 1113 aa23.42■■□□□ 1.34
TRAPPC4-210ENST00000531290 CACNG3O60359 315 aa23.41■■□□□ 1.34
TRAPPC4-210ENST00000531290 NTSR1P30989 418 aa23.41■■□□□ 1.34
TRAPPC4-210ENST00000531290 ANP32AP39687 249 aaKnown RBP23.41■■□□□ 1.34
TRAPPC4-210ENST00000531290 P2RY2P41231 377 aa23.41■■□□□ 1.34
TRAPPC4-210ENST00000531290 LRRC63Q05C16 580 aa23.41■■□□□ 1.34
TRAPPC4-210ENST00000531290 STIM1Q13586 685 aa23.41■■□□□ 1.34
TRAPPC4-210ENST00000531290 CYP2U1Q7Z449 544 aa23.41■■□□□ 1.34
TRAPPC4-210ENST00000531290 PIGZQ86VD9 579 aa23.41■■□□□ 1.34
TRAPPC4-210ENST00000531290 ERCC4Q92889 916 aaPredicted RBP23.41■■□□□ 1.34
TRAPPC4-210ENST00000531290 TIGD1Q96MW7 591 aa23.41■■□□□ 1.34
TRAPPC4-210ENST00000531290 RASAL2Q9UJF2 1139 aa23.41■■□□□ 1.34
TRAPPC4-210ENST00000531290 COQ4Q9Y3A0 265 aa23.41■■□□□ 1.34
TRAPPC4-210ENST00000531290 KHNYNO15037 678 aaKnown RBP23.4■■□□□ 1.34
TRAPPC4-210ENST00000531290 STC2O76061 302 aa23.4■■□□□ 1.34
TRAPPC4-210ENST00000531290 PMS1P54277 932 aaKnown RBP23.4■■□□□ 1.34
TRAPPC4-210ENST00000531290 YWHAEP62258 255 aaKnown RBP23.4■■□□□ 1.34
TRAPPC4-210ENST00000531290 EFEMP1Q12805 493 aa23.4■■□□□ 1.34
TRAPPC4-210ENST00000531290 CUL2Q13617 745 aa23.4■■□□□ 1.34
TRAPPC4-210ENST00000531290 Q6ZNB5 142 aa23.4■■□□□ 1.34
TRAPPC4-210ENST00000531290 RSRC2Q7L4I2 434 aaKnown RBP23.4■■□□□ 1.34
TRAPPC4-210ENST00000531290 ZC3H3Q8IXZ2 948 aaKnown RBP23.4■■□□□ 1.34
TRAPPC4-210ENST00000531290 CHPFQ8IZ52 775 aa23.4■■□□□ 1.34
TRAPPC4-210ENST00000531290 SPATA20Q8TB22 786 aa23.4■■□□□ 1.34
TRAPPC4-210ENST00000531290 BHMTQ93088 406 aa23.4■■□□□ 1.34
TRAPPC4-210ENST00000531290 EDEM2Q9BV94 578 aa23.4■■□□□ 1.34
TRAPPC4-210ENST00000531290 DCLK3Q9C098 648 aa23.4■■□□□ 1.34
TRAPPC4-210ENST00000531290 STRIP2Q9ULQ0 834 aa23.4■■□□□ 1.34
TRAPPC4-210ENST00000531290 ATG2BQ96BY7 2078 aa23.4■■□□□ 1.34
TRAPPC4-210ENST00000531290 SDK1Q7Z5N4 2213 aa23.39■■□□□ 1.34
TRAPPC4-210ENST00000531290 TM4SF5O14894 197 aa23.39■■□□□ 1.33
TRAPPC4-210ENST00000531290 HOXB2P14652 356 aa23.39■■□□□ 1.33
TRAPPC4-210ENST00000531290 WASP42768 502 aa23.39■■□□□ 1.33
TRAPPC4-210ENST00000531290 DGKGP49619 791 aa23.39■■□□□ 1.33
TRAPPC4-210ENST00000531290 PIGKQ92643 395 aa23.39■■□□□ 1.33
TRAPPC4-210ENST00000531290 METTL14Q9HCE5 456 aaKnown RBP23.39■■□□□ 1.33
TRAPPC4-210ENST00000531290 HESX1Q9UBX0 185 aa23.39■■□□□ 1.33
TRAPPC4-210ENST00000531290 HELZP42694 1942 aaKnown RBP23.38■■□□□ 1.33
TRAPPC4-210ENST00000531290 PSMA7O14818 248 aa23.38■■□□□ 1.33
TRAPPC4-210ENST00000531290 HMBSP08397 361 aa23.38■■□□□ 1.33
TRAPPC4-210ENST00000531290 CHKAP35790 457 aa23.38■■□□□ 1.33
TRAPPC4-210ENST00000531290 TKTL1P51854 596 aa23.38■■□□□ 1.33
TRAPPC4-210ENST00000531290 YWHAGP61981 247 aaKnown RBP eCLIP23.38■■□□□ 1.33
TRAPPC4-210ENST00000531290 GOLGA7BQ2TAP0 167 aa23.38■■□□□ 1.33
TRAPPC4-210ENST00000531290 MAP7D1Q3KQU3 841 aa23.38■■□□□ 1.33
TRAPPC4-210ENST00000531290 SGO2Q562F6 1265 aa23.38■■□□□ 1.33
TRAPPC4-210ENST00000531290 RAB41Q5JT25 222 aa23.38■■□□□ 1.33
TRAPPC4-210ENST00000531290 EGFLAMQ63HQ2 1017 aa23.38■■□□□ 1.33
TRAPPC4-210ENST00000531290 TOGARAM2Q6ZUX3 1019 aa23.38■■□□□ 1.33
TRAPPC4-210ENST00000531290 DHTKD1Q96HY7 919 aaPredicted RBP23.38■■□□□ 1.33
TRAPPC4-210ENST00000531290 PLK2Q9NYY3 685 aa23.38■■□□□ 1.33
TRAPPC4-210ENST00000531290 MARCH2Q9P0N8 246 aa23.38■■□□□ 1.33
TRAPPC4-210ENST00000531290 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.37■■□□□ 1.33
TRAPPC4-210ENST00000531290 TRIM49BA6NDI0 452 aa23.37■■□□□ 1.33
TRAPPC4-210ENST00000531290 ZBED1O96006 694 aa23.37■■□□□ 1.33
TRAPPC4-210ENST00000531290 KLKB1P03952 638 aa23.37■■□□□ 1.33
TRAPPC4-210ENST00000531290 CD19P15391 556 aa23.37■■□□□ 1.33
TRAPPC4-210ENST00000531290 LRMPQ12912 555 aa23.37■■□□□ 1.33
TRAPPC4-210ENST00000531290 SPDYCQ5MJ68 293 aa23.37■■□□□ 1.33
TRAPPC4-210ENST00000531290 ISM2Q6H9L7 571 aa23.37■■□□□ 1.33
TRAPPC4-210ENST00000531290 TMEFF1Q8IYR6 380 aa23.37■■□□□ 1.33
TRAPPC4-210ENST00000531290 FRMD1Q8N878 549 aa23.37■■□□□ 1.33
TRAPPC4-210ENST00000531290 SLC35C1Q96A29 364 aa23.37■■□□□ 1.33
TRAPPC4-210ENST00000531290 CNTNAP3BQ96NU0 1288 aa23.37■■□□□ 1.33
TRAPPC4-210ENST00000531290 LSM14BQ9BX40 385 aaKnown RBP23.37■■□□□ 1.33
TRAPPC4-210ENST00000531290 CNTNAP3Q9BZ76 1288 aa23.37■■□□□ 1.33
TRAPPC4-210ENST00000531290 LRRC4Q9HBW1 653 aa23.37■■□□□ 1.33
TRAPPC4-210ENST00000531290 TSPAN16Q9UKR8 245 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms