RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 KIAA0319LQ8IZA0 1049 aa8.38□□□□□ -1.07
CSDE1-213ENST00000530784 IL31RAQ8NI17 732 aa8.38□□□□□ -1.07
CSDE1-213ENST00000530784 TSR2Q969E8 191 aaKnown RBP8.38□□□□□ -1.07
CSDE1-213ENST00000530784 MOGAT1Q96PD6 335 aa8.38□□□□□ -1.07
CSDE1-213ENST00000530784 TIMP4Q99727 224 aa8.38□□□□□ -1.07
CSDE1-213ENST00000530784 PTDSS2Q9BVG9 487 aa8.38□□□□□ -1.07
CSDE1-213ENST00000530784 CPNE5Q9HCH3 593 aa8.38□□□□□ -1.07
CSDE1-213ENST00000530784 SERTAD3Q9UJW9 196 aa8.38□□□□□ -1.07
CSDE1-213ENST00000530784 NIP7Q9Y221 180 aaKnown RBP eCLIP8.38□□□□□ -1.07
CSDE1-213ENST00000530784 SSX2IPQ9Y2D8 614 aa8.38□□□□□ -1.07
CSDE1-213ENST00000530784 FER1L6Q2WGJ9 1857 aa8.38□□□□□ -1.07
CSDE1-213ENST00000530784 A6NNZ2 444 aa8.37□□□□□ -1.07
CSDE1-213ENST00000530784 BTN3A1O00481 513 aa8.37□□□□□ -1.07
CSDE1-213ENST00000530784 ERC2O15083 957 aa8.37□□□□□ -1.07
CSDE1-213ENST00000530784 URI1O94763 535 aaPredicted RBP8.37□□□□□ -1.07
CSDE1-213ENST00000530784 CTBP1Q13363 440 aa8.37□□□□□ -1.07
CSDE1-213ENST00000530784 TAF7Q15545 349 aaPredicted RBP8.37□□□□□ -1.07
CSDE1-213ENST00000530784 ZNF783Q6ZMS7 281 aa8.37□□□□□ -1.07
CSDE1-213ENST00000530784 MYO1HQ8N1T3 1032 aa8.37□□□□□ -1.07
CSDE1-213ENST00000530784 SLC15A4Q8N697 577 aa8.37□□□□□ -1.07
CSDE1-213ENST00000530784 OR6B3Q8NGW1 331 aa8.37□□□□□ -1.07
CSDE1-213ENST00000530784 DDX20Q9UHI6 824 aaKnown RBP8.37□□□□□ -1.07
CSDE1-213ENST00000530784 LAMB4A4D0S4 1761 aa8.37□□□□□ -1.07
CSDE1-213ENST00000530784 ARHGEF17Q96PE2 2063 aaPredicted RBP8.36□□□□□ -1.07
CSDE1-213ENST00000530784 FAM227AF5H4B4 570 aa8.36□□□□□ -1.07
CSDE1-213ENST00000530784 MYO1CO00159 1063 aa8.36□□□□□ -1.07
CSDE1-213ENST00000530784 HSPA1AP0DMV8 641 aaKnown RBP8.36□□□□□ -1.07
CSDE1-213ENST00000530784 HSPA1BP0DMV9 641 aaKnown RBP8.36□□□□□ -1.07
CSDE1-213ENST00000530784 BMPR2Q13873 1038 aa8.36□□□□□ -1.07
CSDE1-213ENST00000530784 LMBRD2Q68DH5 695 aaPredicted RBP8.36□□□□□ -1.07
CSDE1-213ENST00000530784 DTX2Q86UW9 622 aa8.36□□□□□ -1.07
CSDE1-213ENST00000530784 ZNF280BQ86YH2 543 aa8.36□□□□□ -1.07
CSDE1-213ENST00000530784 PNISRQ8TF01 805 aaKnown RBP8.36□□□□□ -1.07
CSDE1-213ENST00000530784 ZNF384Q8TF68 577 aa8.36□□□□□ -1.07
CSDE1-213ENST00000530784 HAPLN3Q96S86 360 aa8.36□□□□□ -1.07
CSDE1-213ENST00000530784 C22orf23Q9BZE7 217 aa8.36□□□□□ -1.07
CSDE1-213ENST00000530784 DPH1Q9BZG8 443 aa8.36□□□□□ -1.07
CSDE1-213ENST00000530784 METTL14Q9HCE5 456 aaKnown RBP8.36□□□□□ -1.07
CSDE1-213ENST00000530784 ARPP21Q9UBL0 812 aaPredicted RBP8.36□□□□□ -1.07
CSDE1-213ENST00000530784 L1RE1Q9UN81 338 aa8.36□□□□□ -1.07
CSDE1-213ENST00000530784 SLX4Q8IY92 1834 aa8.36□□□□□ -1.07
CSDE1-213ENST00000530784 A0A087WWL8 130 aa8.35□□□□□ -1.07
CSDE1-213ENST00000530784 hCG_1984214I3L0E3 225 aa8.35□□□□□ -1.07
CSDE1-213ENST00000530784 TTLL1O95922 423 aa8.35□□□□□ -1.07
CSDE1-213ENST00000530784 ITPKBP27987 946 aa8.35□□□□□ -1.07
CSDE1-213ENST00000530784 PCSK6P29122 969 aa8.35□□□□□ -1.07
CSDE1-213ENST00000530784 PPIFP30405 207 aaKnown RBP8.35□□□□□ -1.07
CSDE1-213ENST00000530784 SLC7A1P30825 629 aa8.35□□□□□ -1.07
CSDE1-213ENST00000530784 ALDH1B1P30837 517 aa8.35□□□□□ -1.07
CSDE1-213ENST00000530784 CNN3Q15417 329 aaKnown RBP8.35□□□□□ -1.07
CSDE1-213ENST00000530784 HLFQ16534 295 aa8.35□□□□□ -1.07
CSDE1-213ENST00000530784 RGS7BPQ6MZT1 257 aaPredicted RBP8.35□□□□□ -1.07
CSDE1-213ENST00000530784 KIF6Q6ZMV9 814 aa8.35□□□□□ -1.07
CSDE1-213ENST00000530784 MAVSQ7Z434 540 aa8.35□□□□□ -1.07
CSDE1-213ENST00000530784 RASAL3Q86YV0 1011 aa8.35□□□□□ -1.07
CSDE1-213ENST00000530784 ATRIPQ8WXE1 791 aa8.35□□□□□ -1.07
CSDE1-213ENST00000530784 ANKS1AQ92625 1134 aa8.35□□□□□ -1.07
CSDE1-213ENST00000530784 NELL1Q92832 810 aa8.35□□□□□ -1.07
CSDE1-213ENST00000530784 NYXQ9GZU5 481 aa8.35□□□□□ -1.07
CSDE1-213ENST00000530784 MIS18AQ9NYP9 233 aa8.35□□□□□ -1.07
CSDE1-213ENST00000530784 NDRG4Q9ULP0 352 aaKnown RBP8.35□□□□□ -1.07
CSDE1-213ENST00000530784 SHOC2Q9UQ13 582 aa8.35□□□□□ -1.07
CSDE1-213ENST00000530784 MRPS17Q9Y2R5 130 aaKnown RBP8.35□□□□□ -1.07
CSDE1-213ENST00000530784 ABCC12Q96J65 1359 aa8.35□□□□□ -1.07
CSDE1-213ENST00000530784 CACNA1SQ13698 1873 aa8.34□□□□□ -1.07
CSDE1-213ENST00000530784 ZNF541Q9H0D2 1346 aa8.34□□□□□ -1.07
CSDE1-213ENST00000530784 MAPK8IP3Q9UPT6 1336 aa8.34□□□□□ -1.07
CSDE1-213ENST00000530784 KAT6AQ92794 2004 aa8.34□□□□□ -1.07
CSDE1-213ENST00000530784 ERVV-1B6SEH8 477 aa8.34□□□□□ -1.07
CSDE1-213ENST00000530784 TBC1D4O60343 1298 aa8.34□□□□□ -1.07
CSDE1-213ENST00000530784 WT1P19544 449 aaPredicted RBP8.34□□□□□ -1.07
CSDE1-213ENST00000530784 EN2P19622 333 aaPredicted RBP8.34□□□□□ -1.07
CSDE1-213ENST00000530784 SLC13A2Q13183 592 aa8.34□□□□□ -1.07
CSDE1-213ENST00000530784 OLFM4Q6UX06 510 aa8.34□□□□□ -1.07
CSDE1-213ENST00000530784 NGEFQ8N5V2 710 aa8.34□□□□□ -1.07
CSDE1-213ENST00000530784 MESP1Q9BRJ9 268 aa8.34□□□□□ -1.07
CSDE1-213ENST00000530784 TAF1DQ9H5J8 278 aaPredicted RBP8.34□□□□□ -1.07
CSDE1-213ENST00000530784 SMURF2Q9HAU4 748 aa8.34□□□□□ -1.07
CSDE1-213ENST00000530784 SERTAD4Q9NUC0 356 aa8.34□□□□□ -1.07
CSDE1-213ENST00000530784 KLHL42Q9P2K6 505 aa8.34□□□□□ -1.07
CSDE1-213ENST00000530784 RIC1Q4ADV7 1423 aa8.34□□□□□ -1.07
CSDE1-213ENST00000530784 DICER1Q9UPY3 1922 aaKnown RBP8.34□□□□□ -1.07
CSDE1-213ENST00000530784 IBTKQ9P2D0 1353 aaPredicted RBP8.34□□□□□ -1.07
CSDE1-213ENST00000530784 MAP3K15Q6ZN16 1313 aa8.33□□□□□ -1.08
CSDE1-213ENST00000530784 KDM3BQ7LBC6 1761 aa8.33□□□□□ -1.08
CSDE1-213ENST00000530784 CFAP69A5D8W1 941 aa8.33□□□□□ -1.08
CSDE1-213ENST00000530784 VSTM5A8MXK1 200 aa8.33□□□□□ -1.08
CSDE1-213ENST00000530784 TMEM233B4DJY2 109 aa8.33□□□□□ -1.08
CSDE1-213ENST00000530784 MYO1FO00160 1098 aa8.33□□□□□ -1.08
CSDE1-213ENST00000530784 MASP2O00187 686 aa8.33□□□□□ -1.08
CSDE1-213ENST00000530784 TBX3O15119 743 aa8.33□□□□□ -1.08
CSDE1-213ENST00000530784 ERBB2P04626 1255 aa8.33□□□□□ -1.08
CSDE1-213ENST00000530784 EBLN1P0CF75 366 aa8.33□□□□□ -1.08
CSDE1-213ENST00000530784 CYP2C9P11712 490 aa8.33□□□□□ -1.08
CSDE1-213ENST00000530784 JUPP14923 745 aa8.33□□□□□ -1.08
CSDE1-213ENST00000530784 LIPAP38571 399 aa8.33□□□□□ -1.08
CSDE1-213ENST00000530784 CLCN2P51788 898 aa8.33□□□□□ -1.08
CSDE1-213ENST00000530784 WNT3P56703 355 aa8.33□□□□□ -1.08
CSDE1-213ENST00000530784 EIF4A1P60842 406 aaKnown RBP8.33□□□□□ -1.08
CSDE1-213ENST00000530784 E2F2Q14209 437 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms