RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 TANGO2Q6ICL3 276 aa16.78■□□□□ 0.28
BRK1-201ENST00000530758 PARM1Q6UWI2 310 aa16.78■□□□□ 0.28
BRK1-201ENST00000530758 TMTC1Q8IUR5 882 aa16.78■□□□□ 0.28
BRK1-201ENST00000530758 MFSD6LQ8IWD5 586 aa16.78■□□□□ 0.28
BRK1-201ENST00000530758 CCDC170Q8IYT3 715 aa16.78■□□□□ 0.28
BRK1-201ENST00000530758 SPC24Q8NBT2 197 aa16.78■□□□□ 0.28
BRK1-201ENST00000530758 C3orf20Q8ND61 904 aa16.78■□□□□ 0.28
BRK1-201ENST00000530758 GOLGA1Q92805 767 aa16.78■□□□□ 0.28
BRK1-201ENST00000530758 NT5C3BQ969T7 300 aa16.78■□□□□ 0.28
BRK1-201ENST00000530758 CCDC42Q96M95 316 aa16.78■□□□□ 0.28
BRK1-201ENST00000530758 C11orf70Q9BRQ4 267 aa16.78■□□□□ 0.28
BRK1-201ENST00000530758 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.78■□□□□ 0.28
BRK1-201ENST00000530758 KLF16Q9BXK1 252 aaPredicted RBP16.78■□□□□ 0.28
BRK1-201ENST00000530758 KCNK12Q9HB15 430 aa16.78■□□□□ 0.28
BRK1-201ENST00000530758 TRPC7Q9HCX4 862 aa16.78■□□□□ 0.28
BRK1-201ENST00000530758 LIMD1Q9UGP4 676 aa16.78■□□□□ 0.28
BRK1-201ENST00000530758 DNMT3LQ9UJW3 386 aa16.78■□□□□ 0.28
BRK1-201ENST00000530758 SIGLEC16A6NMB1 481 aa16.77■□□□□ 0.28
BRK1-201ENST00000530758 GOLGA6L6A8MZA4 724 aa16.77■□□□□ 0.28
BRK1-201ENST00000530758 PRAMEF12O95522 483 aa16.77■□□□□ 0.28
BRK1-201ENST00000530758 IGLV3-25P01717 112 aa16.77■□□□□ 0.28
BRK1-201ENST00000530758 MYBL1P10243 752 aa16.77■□□□□ 0.28
BRK1-201ENST00000530758 NOS2P35228 1153 aa16.77■□□□□ 0.28
BRK1-201ENST00000530758 FCHO2Q0JRZ9 810 aa16.77■□□□□ 0.28
BRK1-201ENST00000530758 C10orf120Q5SQS8 335 aa16.77■□□□□ 0.28
BRK1-201ENST00000530758 PPP1R15BQ5SWA1 713 aa16.77■□□□□ 0.28
BRK1-201ENST00000530758 SYPL2Q5VXT5 272 aa16.77■□□□□ 0.28
BRK1-201ENST00000530758 PLEKHA7Q6IQ23 1121 aa16.77■□□□□ 0.28
BRK1-201ENST00000530758 TMEM139Q8IV31 216 aa16.77■□□□□ 0.28
BRK1-201ENST00000530758 RSPRY1Q96DX4 576 aa16.77■□□□□ 0.28
BRK1-201ENST00000530758 LRRC3BQ96PB8 259 aa16.77■□□□□ 0.28
BRK1-201ENST00000530758 TMEM51Q9NW97 253 aa16.77■□□□□ 0.28
BRK1-201ENST00000530758 RRN3Q9NYV6 651 aa16.77■□□□□ 0.28
BRK1-201ENST00000530758 NAALADL1Q9UQQ1 740 aa16.77■□□□□ 0.28
BRK1-201ENST00000530758 CCL26Q9Y258 94 aa16.77■□□□□ 0.28
BRK1-201ENST00000530758 AKR1B10O60218 316 aa16.76■□□□□ 0.27
BRK1-201ENST00000530758 DAB1O75553 588 aa16.76■□□□□ 0.27
BRK1-201ENST00000530758 MBL2P11226 248 aaPredicted RBP16.76■□□□□ 0.27
BRK1-201ENST00000530758 NCAM1P13591 858 aa16.76■□□□□ 0.27
BRK1-201ENST00000530758 SP100P23497 879 aaPredicted RBP16.76■□□□□ 0.27
BRK1-201ENST00000530758 VIPR2P41587 438 aa16.76■□□□□ 0.27
BRK1-201ENST00000530758 MATKP42679 507 aa16.76■□□□□ 0.27
BRK1-201ENST00000530758 COG7P83436 770 aa16.76■□□□□ 0.27
BRK1-201ENST00000530758 GFPT1Q06210 699 aaPredicted RBP16.76■□□□□ 0.27
BRK1-201ENST00000530758 NNTQ13423 1086 aa16.76■□□□□ 0.27
BRK1-201ENST00000530758 ZNF77Q15935 545 aa16.76■□□□□ 0.27
BRK1-201ENST00000530758 CCDC122Q5T0U0 273 aa16.76■□□□□ 0.27
BRK1-201ENST00000530758 C10orf76Q5T2E6 689 aa16.76■□□□□ 0.27
BRK1-201ENST00000530758 BNIPLQ7Z465 357 aa16.76■□□□□ 0.27
BRK1-201ENST00000530758 DDX42Q86XP3 938 aaKnown RBP eCLIP16.76■□□□□ 0.27
BRK1-201ENST00000530758 DEFB106AQ8N104 65 aa16.76■□□□□ 0.27
BRK1-201ENST00000530758 RNF139Q8WU17 664 aa16.76■□□□□ 0.27
BRK1-201ENST00000530758 DEPDC1BQ8WUY9 529 aa16.76■□□□□ 0.27
BRK1-201ENST00000530758 EDEM1Q92611 657 aa16.76■□□□□ 0.27
BRK1-201ENST00000530758 FAM149B1Q96BN6 582 aa16.76■□□□□ 0.27
BRK1-201ENST00000530758 TRIM11Q96F44 468 aa16.76■□□□□ 0.27
BRK1-201ENST00000530758 PDLIM2Q96JY6 352 aa16.76■□□□□ 0.27
BRK1-201ENST00000530758 RPP25Q9BUL9 199 aaKnown RBP16.76■□□□□ 0.27
BRK1-201ENST00000530758 DDX23Q9BUQ8 820 aaKnown RBP16.76■□□□□ 0.27
BRK1-201ENST00000530758 PLA2G2FQ9BZM2 168 aa16.76■□□□□ 0.27
BRK1-201ENST00000530758 SMOC2Q9H3U7 446 aa16.76■□□□□ 0.27
BRK1-201ENST00000530758 DEF6Q9H4E7 631 aa16.76■□□□□ 0.27
BRK1-201ENST00000530758 RAPGEFL1Q9UHV5 662 aa16.76■□□□□ 0.27
BRK1-201ENST00000530758 NUDT5Q9UKK9 219 aa16.76■□□□□ 0.27
BRK1-201ENST00000530758 HBS1LQ9Y450 684 aaKnown RBP16.76■□□□□ 0.27
BRK1-201ENST00000530758 CPQQ9Y646 472 aa16.76■□□□□ 0.27
BRK1-201ENST00000530758 NUMBLQ9Y6R0 609 aa16.76■□□□□ 0.27
BRK1-201ENST00000530758 ANKRD62A6NC57 917 aa16.75■□□□□ 0.27
BRK1-201ENST00000530758 FAM86C2PA6NEL3 165 aa16.75■□□□□ 0.27
BRK1-201ENST00000530758 HEPACAM2A8MVW5 462 aa16.75■□□□□ 0.27
BRK1-201ENST00000530758 TMCO5BA8MYB1 307 aa16.75■□□□□ 0.27
BRK1-201ENST00000530758 GREM1O60565 184 aa16.75■□□□□ 0.27
BRK1-201ENST00000530758 KRT3P12035 628 aa16.75■□□□□ 0.27
BRK1-201ENST00000530758 PSMC3P17980 439 aa16.75■□□□□ 0.27
BRK1-201ENST00000530758 RRM1P23921 792 aa16.75■□□□□ 0.27
BRK1-201ENST00000530758 KPNA1P52294 538 aaPredicted RBP16.75■□□□□ 0.27
BRK1-201ENST00000530758 RING1Q06587 406 aa16.75■□□□□ 0.27
BRK1-201ENST00000530758 USP4Q13107 963 aa16.75■□□□□ 0.27
BRK1-201ENST00000530758 FAM102AQ5T9C2 384 aaPredicted RBP16.75■□□□□ 0.27
BRK1-201ENST00000530758 VITQ6UXI7 678 aa16.75■□□□□ 0.27
BRK1-201ENST00000530758 HTR3DQ70Z44 454 aa16.75■□□□□ 0.27
BRK1-201ENST00000530758 RSRC2Q7L4I2 434 aaKnown RBP16.75■□□□□ 0.27
BRK1-201ENST00000530758 SLC44A3Q8N4M1 653 aa16.75■□□□□ 0.27
BRK1-201ENST00000530758 BPIFB1Q8TDL5 484 aa16.75■□□□□ 0.27
BRK1-201ENST00000530758 PGAP3Q96FM1 320 aaPredicted RBP16.75■□□□□ 0.27
BRK1-201ENST00000530758 NPY6RQ99463 290 aa16.75■□□□□ 0.27
BRK1-201ENST00000530758 SMG9Q9H0W8 520 aaKnown RBP16.75■□□□□ 0.27
BRK1-201ENST00000530758 PARVAQ9NVD7 372 aa16.75■□□□□ 0.27
BRK1-201ENST00000530758 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.75■□□□□ 0.27
BRK1-201ENST00000530758 MARCH2Q9P0N8 246 aa16.75■□□□□ 0.27
BRK1-201ENST00000530758 E2F8A0AVK6 867 aa16.74■□□□□ 0.27
BRK1-201ENST00000530758 C2CD4BA6NLJ0 364 aa16.74■□□□□ 0.27
BRK1-201ENST00000530758 EIF3CLB5ME19 914 aaKnown RBP16.74■□□□□ 0.27
BRK1-201ENST00000530758 LEFTY2O00292 366 aa16.74■□□□□ 0.27
BRK1-201ENST00000530758 DPYSL4O14531 572 aa16.74■□□□□ 0.27
BRK1-201ENST00000530758 CAPN9O14815 690 aa16.74■□□□□ 0.27
BRK1-201ENST00000530758 ZNF263O14978 683 aa16.74■□□□□ 0.27
BRK1-201ENST00000530758 ENDOD1O94919 500 aa16.74■□□□□ 0.27
BRK1-201ENST00000530758 IGLV3-27P01718 113 aa16.74■□□□□ 0.27
BRK1-201ENST00000530758 GALCP54803 685 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms