RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 SQORQ9Y6N5 450 aa14.62□□□□□ -0.07
PCF11-204ENST00000530660 CFAP99D6REC4 459 aa14.62□□□□□ -0.07
PCF11-204ENST00000530660 H3BMQ9 156 aa14.62□□□□□ -0.07
PCF11-204ENST00000530660 PPP1R11O60927 126 aaPredicted RBP14.62□□□□□ -0.07
PCF11-204ENST00000530660 GUCY1B2O75343 617 aa14.62□□□□□ -0.07
PCF11-204ENST00000530660 ENTPD3O75355 529 aa14.62□□□□□ -0.07
PCF11-204ENST00000530660 CSDE1O75534 798 aaKnown RBP14.62□□□□□ -0.07
PCF11-204ENST00000530660 LDHCP07864 332 aa14.62□□□□□ -0.07
PCF11-204ENST00000530660 GRM5P41594 1212 aa14.62□□□□□ -0.07
PCF11-204ENST00000530660 FAAH2Q6GMR7 532 aa14.62□□□□□ -0.07
PCF11-204ENST00000530660 KRT80Q6KB66 452 aa14.62□□□□□ -0.07
PCF11-204ENST00000530660 USP43Q70EL4 1123 aa14.62□□□□□ -0.07
PCF11-204ENST00000530660 LRRC47Q8N1G4 583 aaKnown RBP14.62□□□□□ -0.07
PCF11-204ENST00000530660 SGF29Q96ES7 293 aa14.62□□□□□ -0.07
PCF11-204ENST00000530660 RMND5BQ96G75 393 aaPredicted RBP14.62□□□□□ -0.07
PCF11-204ENST00000530660 COG8Q96MW5 612 aa14.62□□□□□ -0.07
PCF11-204ENST00000530660 FERMT1Q9BQL6 677 aa14.62□□□□□ -0.07
PCF11-204ENST00000530660 TMEM121Q9BTD3 319 aa14.62□□□□□ -0.07
PCF11-204ENST00000530660 RPF2Q9H7B2 306 aaKnown RBP14.62□□□□□ -0.07
PCF11-204ENST00000530660 KLHL3Q9UH77 587 aa14.62□□□□□ -0.07
PCF11-204ENST00000530660 USTQ9Y2C2 406 aa14.62□□□□□ -0.07
PCF11-204ENST00000530660 MGEA5O60502 916 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 TOP3BO95985 862 aaKnown RBP14.61□□□□□ -0.07
PCF11-204ENST00000530660 APOEP02649 317 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 NCF2P19878 526 aaPredicted RBP14.61□□□□□ -0.07
PCF11-204ENST00000530660 JAK1P23458 1154 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 SLC18A2Q05940 514 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 KLHL38Q2WGJ6 581 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 ZFYVE27Q5T4F4 411 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 MCF2L2Q86YR7 1114 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 CLEC10AQ8IUN9 316 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 MYO1HQ8N1T3 1032 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 TMEM79Q9BSE2 394 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 INO80BQ9C086 356 aaPredicted RBP14.61□□□□□ -0.07
PCF11-204ENST00000530660 IKBKGQ9Y6K9 419 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 SNED1Q8TER0 1413 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 TAF1LQ8IZX4 1826 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 LIASO43766 372 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 ATF7P17544 494 aaPredicted RBP14.61□□□□□ -0.07
PCF11-204ENST00000530660 ADAM17P78536 824 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 VWA5B1Q5TIE3 1220 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 ATG16L1Q676U5 607 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 ZNF778Q96MU6 729 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 VPS45Q9NRW7 570 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 DAPK2Q9UIK4 370 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 GNPTGQ9UJJ9 305 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 ITGA11Q9UKX5 1188 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 ERVK-11Q9UQG0 969 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 ASTN2O75129 1339 aaPredicted RBP14.61□□□□□ -0.07
PCF11-204ENST00000530660 C1orf232A0A0U1RR37 186 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 NOP56O00567 594 aaKnown RBP14.61□□□□□ -0.07
PCF11-204ENST00000530660 CHEK2O96017 543 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 ZNF182P17025 639 aaPredicted RBP14.61□□□□□ -0.07
PCF11-204ENST00000530660 FGFR3P22607 806 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 GCLMP48507 274 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 NKX2-5P52952 324 aaPredicted RBP14.61□□□□□ -0.07
PCF11-204ENST00000530660 ESRRGP62508 458 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 PPP2R5DQ14738 602 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 IL23RQ5VWK5 629 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 NEDD1Q8NHV4 660 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 GABPB2Q8TAK5 448 aaPredicted RBP14.61□□□□□ -0.07
PCF11-204ENST00000530660 KBTBD7Q8WVZ9 684 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 CDH7Q9ULB5 785 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 TLL2Q9Y6L7 1015 aa14.61□□□□□ -0.07
PCF11-204ENST00000530660 IQANK1A0A1B0GTG1 560 aa14.6□□□□□ -0.07
PCF11-204ENST00000530660 PSMD11O00231 422 aa14.6□□□□□ -0.07
PCF11-204ENST00000530660 MRPS5P82675 430 aaKnown RBP14.6□□□□□ -0.07
PCF11-204ENST00000530660 STX3Q13277 289 aa14.6□□□□□ -0.07
PCF11-204ENST00000530660 FLOT2Q14254 428 aa14.6□□□□□ -0.07
PCF11-204ENST00000530660 BMT2Q1RMZ1 405 aa14.6□□□□□ -0.07
PCF11-204ENST00000530660 PERM1Q5SV97 790 aa14.6□□□□□ -0.07
PCF11-204ENST00000530660 POLNQ7Z5Q5 900 aa14.6□□□□□ -0.07
PCF11-204ENST00000530660 BTLAQ7Z6A9 289 aa14.6□□□□□ -0.07
PCF11-204ENST00000530660 SH3GL1Q99961 368 aa14.6□□□□□ -0.07
PCF11-204ENST00000530660 APOBEC2Q9Y235 224 aaKnown RBP14.6□□□□□ -0.07
PCF11-204ENST00000530660 FRMD4BQ9Y2L6 1034 aa14.6□□□□□ -0.07
PCF11-204ENST00000530660 TTLL3Q9Y4R7 772 aa14.6□□□□□ -0.07
PCF11-204ENST00000530660 UNCXA6NJT0 531 aa14.6□□□□□ -0.07
PCF11-204ENST00000530660 TRIM49D1C9J1S8 452 aa14.6□□□□□ -0.07
PCF11-204ENST00000530660 TBCAO75347 108 aaKnown RBP14.6□□□□□ -0.07
PCF11-204ENST00000530660 ESRRBO95718 433 aa14.6□□□□□ -0.07
PCF11-204ENST00000530660 XRCC1P18887 633 aaPredicted RBP14.6□□□□□ -0.07
PCF11-204ENST00000530660 CRKLP46109 303 aaKnown RBP14.6□□□□□ -0.07
PCF11-204ENST00000530660 ZBED5Q49AG3 693 aa14.6□□□□□ -0.07
PCF11-204ENST00000530660 CIAPIN1Q6FI81 312 aa14.6□□□□□ -0.07
PCF11-204ENST00000530660 ANKRD26P1Q6NSI1 321 aa14.6□□□□□ -0.07
PCF11-204ENST00000530660 TMEM26Q6ZUK4 368 aa14.6□□□□□ -0.07
PCF11-204ENST00000530660 SNX29P2Q8IUI4 249 aa14.6□□□□□ -0.07
PCF11-204ENST00000530660 IGDCC3Q8IVU1 814 aa14.6□□□□□ -0.07
PCF11-204ENST00000530660 CATSPER1Q8NEC5 780 aa14.6□□□□□ -0.07
PCF11-204ENST00000530660 CCDC138Q96M89 665 aa14.6□□□□□ -0.07
PCF11-204ENST00000530660 RABL2AQ9UBK7 228 aaPredicted RBP14.6□□□□□ -0.07
PCF11-204ENST00000530660 ST14Q9Y5Y6 855 aa14.6□□□□□ -0.07
PCF11-204ENST00000530660 MAST2Q6P0Q8 1798 aa14.6□□□□□ -0.07
PCF11-204ENST00000530660 ITGB4P16144 1822 aa14.6□□□□□ -0.07
PCF11-204ENST00000530660 TCRBV7S3A2A0A539 114 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 USP17L15C9J2P7 530 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 USP17L13C9JLJ4 530 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 USP17L11C9JVI0 530 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 USP17L18D6R9N7 530 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms