RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 ANO6Q4KMQ2 910 aa7.79□□□□□ -1.16
SVIP-204ENST00000530199 NPNTQ6UXI9 565 aa7.79□□□□□ -1.16
SVIP-204ENST00000530199 MIGA1Q8NAN2 632 aa7.79□□□□□ -1.16
SVIP-204ENST00000530199 SCFD2Q8WU76 684 aa7.79□□□□□ -1.16
SVIP-204ENST00000530199 ATRIPQ8WXE1 791 aa7.79□□□□□ -1.16
SVIP-204ENST00000530199 HOXB13Q92826 284 aaPredicted RBP7.79□□□□□ -1.16
SVIP-204ENST00000530199 NEUROD6Q96NK8 337 aa7.79□□□□□ -1.16
SVIP-204ENST00000530199 KMT5AQ9NQR1 393 aa7.79□□□□□ -1.16
SVIP-204ENST00000530199 RNF146Q9NTX7 359 aa7.79□□□□□ -1.16
SVIP-204ENST00000530199 FAM53CQ9NYF3 392 aa7.79□□□□□ -1.16
SVIP-204ENST00000530199 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.79□□□□□ -1.16
SVIP-204ENST00000530199 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.79□□□□□ -1.16
SVIP-204ENST00000530199 F5H6K3 240 aa7.78□□□□□ -1.16
SVIP-204ENST00000530199 HAS3O00219 553 aa7.78□□□□□ -1.16
SVIP-204ENST00000530199 DCNP07585 359 aaKnown RBP7.78□□□□□ -1.16
SVIP-204ENST00000530199 LTA4HP09960 611 aaKnown RBP7.78□□□□□ -1.16
SVIP-204ENST00000530199 GAAP10253 952 aa7.78□□□□□ -1.16
SVIP-204ENST00000530199 CASTP20810 708 aaKnown RBP7.78□□□□□ -1.16
SVIP-204ENST00000530199 STAT5BP51692 787 aa7.78□□□□□ -1.16
SVIP-204ENST00000530199 LIMK1P53667 647 aa7.78□□□□□ -1.16
SVIP-204ENST00000530199 KLRC3Q07444 240 aa7.78□□□□□ -1.16
SVIP-204ENST00000530199 MORC3Q14149 939 aa7.78□□□□□ -1.16
SVIP-204ENST00000530199 KIAA0753Q2KHM9 967 aa7.78□□□□□ -1.16
SVIP-204ENST00000530199 PRR31Q5SQ13 230 aa7.78□□□□□ -1.16
SVIP-204ENST00000530199 PPP4R3AQ6IN85 833 aa7.78□□□□□ -1.16
SVIP-204ENST00000530199 ABHD15Q6UXT9 468 aa7.78□□□□□ -1.16
SVIP-204ENST00000530199 TTC7BQ86TV6 843 aa7.78□□□□□ -1.16
SVIP-204ENST00000530199 SERINC5Q86VE9 423 aa7.78□□□□□ -1.16
SVIP-204ENST00000530199 UNC5BQ8IZJ1 945 aa7.78□□□□□ -1.16
SVIP-204ENST00000530199 NSUN6Q8TEA1 469 aaKnown RBP7.78□□□□□ -1.16
SVIP-204ENST00000530199 ZCCHC14Q8WYQ9 949 aaKnown RBP7.78□□□□□ -1.16
SVIP-204ENST00000530199 CASP10Q92851 521 aa7.78□□□□□ -1.16
SVIP-204ENST00000530199 MAP4K1Q92918 833 aa7.78□□□□□ -1.16
SVIP-204ENST00000530199 RGMAQ96B86 450 aa7.78□□□□□ -1.16
SVIP-204ENST00000530199 RIOK1Q9BRS2 568 aaKnown RBP7.78□□□□□ -1.16
SVIP-204ENST00000530199 KATNAL1Q9BW62 490 aa7.78□□□□□ -1.16
SVIP-204ENST00000530199 NAA15Q9BXJ9 866 aaKnown RBP7.78□□□□□ -1.16
SVIP-204ENST00000530199 TBC1D17Q9HA65 648 aa7.78□□□□□ -1.16
SVIP-204ENST00000530199 RXFP3Q9NSD7 469 aa7.78□□□□□ -1.16
SVIP-204ENST00000530199 ZSCAN32Q9NX65 697 aa7.78□□□□□ -1.16
SVIP-204ENST00000530199 ADD3Q9UEY8 706 aaKnown RBP7.78□□□□□ -1.16
SVIP-204ENST00000530199 CDH22Q9UJ99 828 aa7.78□□□□□ -1.16
SVIP-204ENST00000530199 FEM1BQ9UK73 627 aa7.78□□□□□ -1.16
SVIP-204ENST00000530199 PHTF1Q9UMS5 762 aa7.78□□□□□ -1.16
SVIP-204ENST00000530199 USP9XQ93008 2570 aaPredicted RBP7.78□□□□□ -1.16
SVIP-204ENST00000530199 LCTP09848 1927 aa7.78□□□□□ -1.16
SVIP-204ENST00000530199 SLC16A6O15403 523 aa7.77□□□□□ -1.17
SVIP-204ENST00000530199 SGTAO43765 313 aa7.77□□□□□ -1.17
SVIP-204ENST00000530199 PHF2O75151 1096 aa7.77□□□□□ -1.17
SVIP-204ENST00000530199 NDUFB10O96000 172 aa7.77□□□□□ -1.17
SVIP-204ENST00000530199 FTLP02792 175 aaPredicted RBP7.77□□□□□ -1.17
SVIP-204ENST00000530199 RPLP2P05387 115 aaKnown RBP7.77□□□□□ -1.17
SVIP-204ENST00000530199 THPOP40225 353 aa7.77□□□□□ -1.17
SVIP-204ENST00000530199 HTR3AP46098 478 aa7.77□□□□□ -1.17
SVIP-204ENST00000530199 ALDH5A1P51649 535 aaPredicted RBP7.77□□□□□ -1.17
SVIP-204ENST00000530199 MAP2K6P52564 334 aa7.77□□□□□ -1.17
SVIP-204ENST00000530199 EXOSC9Q06265 439 aaKnown RBP7.77□□□□□ -1.17
SVIP-204ENST00000530199 TOP3AQ13472 1001 aaPredicted RBP7.77□□□□□ -1.17
SVIP-204ENST00000530199 SEMA5AQ13591 1074 aa7.77□□□□□ -1.17
SVIP-204ENST00000530199 UBE3CQ15386 1083 aa7.77□□□□□ -1.17
SVIP-204ENST00000530199 C19orf54Q5BKX5 351 aa7.77□□□□□ -1.17
SVIP-204ENST00000530199 SPECC1Q5M775 1068 aa7.77□□□□□ -1.17
SVIP-204ENST00000530199 THEMIS2Q5TEJ8 643 aa7.77□□□□□ -1.17
SVIP-204ENST00000530199 TRMT10BQ6PF06 316 aaKnown RBP7.77□□□□□ -1.17
SVIP-204ENST00000530199 DARS2Q6PI48 645 aaKnown RBP7.77□□□□□ -1.17
SVIP-204ENST00000530199 Q6ZVL8 140 aa7.77□□□□□ -1.17
SVIP-204ENST00000530199 RASGRP2Q7LDG7 609 aa7.77□□□□□ -1.17
SVIP-204ENST00000530199 RHOT1Q8IXI2 618 aa7.77□□□□□ -1.17
SVIP-204ENST00000530199 RPAP2Q8IXW5 612 aaPredicted RBP7.77□□□□□ -1.17
SVIP-204ENST00000530199 DRC7Q8IY82 874 aa7.77□□□□□ -1.17
SVIP-204ENST00000530199 PIK3C3Q8NEB9 887 aa7.77□□□□□ -1.17
SVIP-204ENST00000530199 SNX33Q8WV41 574 aa7.77□□□□□ -1.17
SVIP-204ENST00000530199 ELAC2Q9BQ52 826 aaKnown RBP7.77□□□□□ -1.17
SVIP-204ENST00000530199 APOL5Q9BWW9 433 aa7.77□□□□□ -1.17
SVIP-204ENST00000530199 BHMT2Q9H2M3 363 aa7.77□□□□□ -1.17
SVIP-204ENST00000530199 MCM9Q9NXL9 1143 aa7.77□□□□□ -1.17
SVIP-204ENST00000530199 IGSF9Q9P2J2 1179 aa7.77□□□□□ -1.17
SVIP-204ENST00000530199 VWA7Q9Y334 891 aa7.77□□□□□ -1.17
SVIP-204ENST00000530199 MYO5AQ9Y4I1 1855 aaKnown RBP7.77□□□□□ -1.17
SVIP-204ENST00000530199 TTC3P53804 2025 aa7.76□□□□□ -1.17
SVIP-204ENST00000530199 MYH8P13535 1937 aa7.76□□□□□ -1.17
SVIP-204ENST00000530199 KIAA1671Q9BY89 1806 aa7.76□□□□□ -1.17
SVIP-204ENST00000530199 CAPN8A6NHC0 703 aa7.76□□□□□ -1.17
SVIP-204ENST00000530199 PRAMEF4O60810 478 aa7.76□□□□□ -1.17
SVIP-204ENST00000530199 KLHL18O94889 574 aa7.76□□□□□ -1.17
SVIP-204ENST00000530199 ENDOD1O94919 500 aa7.76□□□□□ -1.17
SVIP-204ENST00000530199 RETP07949 1114 aa7.76□□□□□ -1.17
SVIP-204ENST00000530199 TXNP10599 105 aaKnown RBP7.76□□□□□ -1.17
SVIP-204ENST00000530199 GLULP15104 373 aa7.76□□□□□ -1.17
SVIP-204ENST00000530199 ADSLP30566 484 aaPredicted RBP7.76□□□□□ -1.17
SVIP-204ENST00000530199 ETV4P43268 484 aa7.76□□□□□ -1.17
SVIP-204ENST00000530199 CSRP2Q16527 193 aa7.76□□□□□ -1.17
SVIP-204ENST00000530199 MST1LQ2TV78 715 aa7.76□□□□□ -1.17
SVIP-204ENST00000530199 LONRF3Q496Y0 759 aa7.76□□□□□ -1.17
SVIP-204ENST00000530199 TRIM68Q6AZZ1 485 aa7.76□□□□□ -1.17
SVIP-204ENST00000530199 TAS1R1Q7RTX1 841 aa7.76□□□□□ -1.17
SVIP-204ENST00000530199 DAAM2Q86T65 1068 aa7.76□□□□□ -1.17
SVIP-204ENST00000530199 AFG1LQ8WV93 481 aa7.76□□□□□ -1.17
SVIP-204ENST00000530199 DYNLL2Q96FJ2 89 aa7.76□□□□□ -1.17
SVIP-204ENST00000530199 PIH1D3Q9NQM4 214 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms