RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 MIS12Q9H081 205 aa13.28□□□□□ -0.28
CCDC90B-216ENST00000529856 ABCC13Q9NSE7 274 aa13.28□□□□□ -0.28
CCDC90B-216ENST00000529856 NDRG2Q9UN36 371 aaKnown RBP13.28□□□□□ -0.28
CCDC90B-216ENST00000529856 MIA3Q5JRA6 1907 aa13.28□□□□□ -0.28
CCDC90B-216ENST00000529856 A0A1B0GTH6 734 aa13.27□□□□□ -0.29
CCDC90B-216ENST00000529856 TRDMT1O14717 391 aaKnown RBP13.27□□□□□ -0.29
CCDC90B-216ENST00000529856 SART1O43290 800 aaKnown RBP13.27□□□□□ -0.29
CCDC90B-216ENST00000529856 GALR2O43603 387 aaPredicted RBP13.27□□□□□ -0.29
CCDC90B-216ENST00000529856 GFPT2O94808 682 aa13.27□□□□□ -0.29
CCDC90B-216ENST00000529856 IRF1P10914 325 aa13.27□□□□□ -0.29
CCDC90B-216ENST00000529856 CHRNB1P11230 501 aa13.27□□□□□ -0.29
CCDC90B-216ENST00000529856 SOX5P35711 763 aa13.27□□□□□ -0.29
CCDC90B-216ENST00000529856 STAT1P42224 750 aa13.27□□□□□ -0.29
CCDC90B-216ENST00000529856 RPS9P46781 194 aaKnown RBP13.27□□□□□ -0.29
CCDC90B-216ENST00000529856 TPM4P67936 248 aa13.27□□□□□ -0.29
CCDC90B-216ENST00000529856 PDCLQ13371 301 aa13.27□□□□□ -0.29
CCDC90B-216ENST00000529856 NR1I3Q14994 352 aa13.27□□□□□ -0.29
CCDC90B-216ENST00000529856 PON2Q15165 354 aa13.27□□□□□ -0.29
CCDC90B-216ENST00000529856 DHCR24Q15392 516 aa13.27□□□□□ -0.29
CCDC90B-216ENST00000529856 RHBDF2Q6PJF5 856 aa13.27□□□□□ -0.29
CCDC90B-216ENST00000529856 NOP9Q86U38 636 aaKnown RBP13.27□□□□□ -0.29
CCDC90B-216ENST00000529856 MIB1Q86YT6 1006 aa13.27□□□□□ -0.29
CCDC90B-216ENST00000529856 PASD1Q8IV76 773 aa13.27□□□□□ -0.29
CCDC90B-216ENST00000529856 BBS7Q8IWZ6 715 aa13.27□□□□□ -0.29
CCDC90B-216ENST00000529856 RNF139Q8WU17 664 aa13.27□□□□□ -0.29
CCDC90B-216ENST00000529856 DDX1Q92499 740 aaKnown RBP13.27□□□□□ -0.29
CCDC90B-216ENST00000529856 EDEM1Q92611 657 aa13.27□□□□□ -0.29
CCDC90B-216ENST00000529856 NAP1L5Q96NT1 182 aaPredicted RBP13.27□□□□□ -0.29
CCDC90B-216ENST00000529856 SPAG5Q96R06 1193 aa13.27□□□□□ -0.29
CCDC90B-216ENST00000529856 LMAN1LQ9HAT1 526 aa13.27□□□□□ -0.29
CCDC90B-216ENST00000529856 OLA1Q9NTK5 396 aaKnown RBP13.27□□□□□ -0.29
CCDC90B-216ENST00000529856 MARCH2Q9P0N8 246 aa13.27□□□□□ -0.29
CCDC90B-216ENST00000529856 RASAL2Q9UJF2 1139 aa13.27□□□□□ -0.29
CCDC90B-216ENST00000529856 STRIP2Q9ULQ0 834 aa13.27□□□□□ -0.29
CCDC90B-216ENST00000529856 ARIH1Q9Y4X5 557 aaPredicted RBP13.27□□□□□ -0.29
CCDC90B-216ENST00000529856 SLC12A8A0AV02 714 aa13.26□□□□□ -0.29
CCDC90B-216ENST00000529856 E5RJQ4 531 aa13.26□□□□□ -0.29
CCDC90B-216ENST00000529856 PAPSS1O43252 624 aaPredicted RBP13.26□□□□□ -0.29
CCDC90B-216ENST00000529856 STC2O76061 302 aa13.26□□□□□ -0.29
CCDC90B-216ENST00000529856 SERPINC1P01008 464 aa13.26□□□□□ -0.29
CCDC90B-216ENST00000529856 LTFP02788 710 aa13.26□□□□□ -0.29
CCDC90B-216ENST00000529856 CYP17A1P05093 508 aa13.26□□□□□ -0.29
CCDC90B-216ENST00000529856 FYNP06241 537 aa13.26□□□□□ -0.29
CCDC90B-216ENST00000529856 CDH5P33151 784 aaPredicted RBP13.26□□□□□ -0.29
CCDC90B-216ENST00000529856 MAGEA9P43362 315 aa13.26□□□□□ -0.29
CCDC90B-216ENST00000529856 GALK1P51570 392 aa13.26□□□□□ -0.29
CCDC90B-216ENST00000529856 TAF3Q5VWG9 929 aa13.26□□□□□ -0.29
CCDC90B-216ENST00000529856 MSANTD2Q6P1R3 559 aa13.26□□□□□ -0.29
CCDC90B-216ENST00000529856 BEND5Q7L4P6 421 aa13.26□□□□□ -0.29
CCDC90B-216ENST00000529856 C1orf131Q8NDD1 294 aaKnown RBP13.26□□□□□ -0.29
CCDC90B-216ENST00000529856 PRSS33Q8NF86 280 aa13.26□□□□□ -0.29
CCDC90B-216ENST00000529856 EPS8L1Q8TE68 723 aa13.26□□□□□ -0.29
CCDC90B-216ENST00000529856 GOLGA1Q92805 767 aa13.26□□□□□ -0.29
CCDC90B-216ENST00000529856 PPP1R13BQ96KQ4 1090 aa13.26□□□□□ -0.29
CCDC90B-216ENST00000529856 NOX5Q96PH1 765 aa13.26□□□□□ -0.29
CCDC90B-216ENST00000529856 CPXM1Q96SM3 734 aa13.26□□□□□ -0.29
CCDC90B-216ENST00000529856 PDCL3Q9H2J4 239 aa13.26□□□□□ -0.29
CCDC90B-216ENST00000529856 TJP2Q9UDY2 1190 aa13.26□□□□□ -0.29
CCDC90B-216ENST00000529856 LSM7Q9UK45 103 aaKnown RBP13.26□□□□□ -0.29
CCDC90B-216ENST00000529856 CEP83Q9Y592 693 aa13.26□□□□□ -0.29
CCDC90B-216ENST00000529856 MYOFQ9NZM1 2061 aa13.25□□□□□ -0.29
CCDC90B-216ENST00000529856 A0A1W2PQC6 194 aa13.25□□□□□ -0.29
CCDC90B-216ENST00000529856 GOLGA6L19H0YKK7 550 aa13.25□□□□□ -0.29
CCDC90B-216ENST00000529856 KLKB1P03952 638 aa13.25□□□□□ -0.29
CCDC90B-216ENST00000529856 HMBSP08397 361 aa13.25□□□□□ -0.29
CCDC90B-216ENST00000529856 SNX16P57768 344 aa13.25□□□□□ -0.29
CCDC90B-216ENST00000529856 FANCCQ00597 558 aa13.25□□□□□ -0.29
CCDC90B-216ENST00000529856 GAB4Q2WGN9 574 aa13.25□□□□□ -0.29
CCDC90B-216ENST00000529856 TMEM196Q5HYL7 178 aa13.25□□□□□ -0.29
CCDC90B-216ENST00000529856 DGKKQ5KSL6 1271 aa13.25□□□□□ -0.29
CCDC90B-216ENST00000529856 LRSAM1Q6UWE0 723 aa13.25□□□□□ -0.29
CCDC90B-216ENST00000529856 Q6ZNB5 142 aa13.25□□□□□ -0.29
CCDC90B-216ENST00000529856 ZNF677Q86XU0 584 aa13.25□□□□□ -0.29
CCDC90B-216ENST00000529856 FMNL3Q8IVF7 1028 aa13.25□□□□□ -0.29
CCDC90B-216ENST00000529856 TMEM35BQ8NCS4 154 aa13.25□□□□□ -0.29
CCDC90B-216ENST00000529856 EXOC4Q96A65 974 aa13.25□□□□□ -0.29
CCDC90B-216ENST00000529856 P2RY13Q9BPV8 354 aa13.25□□□□□ -0.29
CCDC90B-216ENST00000529856 DCLK3Q9C098 648 aa13.25□□□□□ -0.29
CCDC90B-216ENST00000529856 FBRSL1Q9HCM7 1045 aaKnown RBP13.25□□□□□ -0.29
CCDC90B-216ENST00000529856 SFMBT1Q9UHJ3 866 aa13.25□□□□□ -0.29
CCDC90B-216ENST00000529856 NOCTQ9UK39 431 aaKnown RBP13.25□□□□□ -0.29
CCDC90B-216ENST00000529856 ZNF510Q9Y2H8 683 aa13.25□□□□□ -0.29
CCDC90B-216ENST00000529856 HBS1LQ9Y450 684 aaKnown RBP13.25□□□□□ -0.29
CCDC90B-216ENST00000529856 LSM8O95777 96 aaKnown RBP13.24□□□□□ -0.29
CCDC90B-216ENST00000529856 ADH1CP00326 375 aa13.24□□□□□ -0.29
CCDC90B-216ENST00000529856 MMEP08473 750 aa13.24□□□□□ -0.29
CCDC90B-216ENST00000529856 NCAM1P13591 858 aa13.24□□□□□ -0.29
CCDC90B-216ENST00000529856 CHRNB2P17787 502 aa13.24□□□□□ -0.29
CCDC90B-216ENST00000529856 OPRD1P41143 372 aa13.24□□□□□ -0.29
CCDC90B-216ENST00000529856 YWHAZP63104 245 aaKnown RBP13.24□□□□□ -0.29
CCDC90B-216ENST00000529856 GAD2Q05329 585 aa13.24□□□□□ -0.29
CCDC90B-216ENST00000529856 GRSF1Q12849 480 aaKnown RBP eCLIP13.24□□□□□ -0.29
CCDC90B-216ENST00000529856 TCF15Q12870 199 aa13.24□□□□□ -0.29
CCDC90B-216ENST00000529856 CCINQ13939 588 aa13.24□□□□□ -0.29
CCDC90B-216ENST00000529856 LRRC32Q14392 662 aa13.24□□□□□ -0.29
CCDC90B-216ENST00000529856 TRIP4Q15650 581 aaPredicted RBP13.24□□□□□ -0.29
CCDC90B-216ENST00000529856 PTPN20Q4JDL3 420 aa13.24□□□□□ -0.29
CCDC90B-216ENST00000529856 LY6G5CQ5SRR4 150 aa13.24□□□□□ -0.29
CCDC90B-216ENST00000529856 NAIF1Q69YI7 327 aaPredicted RBP13.24□□□□□ -0.29
CCDC90B-216ENST00000529856 FSTL4Q6MZW2 842 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms