RNA–Protein interactions for RNA: ENST00000529224.1

SSH3-206, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-206ENST00000529224 USP33Q8TEY7 942 aa13.73□□□□□ -0.21
SSH3-206ENST00000529224 KCTD13Q8WZ19 329 aa13.73□□□□□ -0.21
SSH3-206ENST00000529224 TFAP2BQ92481 460 aa13.73□□□□□ -0.21
SSH3-206ENST00000529224 FAM81BQ96LP2 452 aa13.73□□□□□ -0.21
SSH3-206ENST00000529224 IPO9Q96P70 1041 aaKnown RBP13.73□□□□□ -0.21
SSH3-206ENST00000529224 GBP4Q96PP9 640 aa13.73□□□□□ -0.21
SSH3-206ENST00000529224 ULBP1Q9BZM6 244 aa13.73□□□□□ -0.21
SSH3-206ENST00000529224 ARHGEF4Q9NR80 690 aa13.73□□□□□ -0.21
SSH3-206ENST00000529224 DACH1Q9UI36 760 aa13.73□□□□□ -0.21
SSH3-206ENST00000529224 RASAL2Q9UJF2 1139 aa13.73□□□□□ -0.21
SSH3-206ENST00000529224 STRIP2Q9ULQ0 834 aa13.73□□□□□ -0.21
SSH3-206ENST00000529224 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.73□□□□□ -0.21
SSH3-206ENST00000529224 ZNF510Q9Y2H8 683 aa13.73□□□□□ -0.21
SSH3-206ENST00000529224 RNF225M0QZC1 329 aaPredicted RBP13.72□□□□□ -0.21
SSH3-206ENST00000529224 GREM1O60565 184 aa13.72□□□□□ -0.21
SSH3-206ENST00000529224 STC2O76061 302 aa13.72□□□□□ -0.21
SSH3-206ENST00000529224 KAT7O95251 611 aa13.72□□□□□ -0.21
SSH3-206ENST00000529224 BRD2P25440 801 aaKnown RBP13.72□□□□□ -0.21
SSH3-206ENST00000529224 GRIA2P42262 883 aa13.72□□□□□ -0.21
SSH3-206ENST00000529224 TNFRSF4P43489 277 aa13.72□□□□□ -0.21
SSH3-206ENST00000529224 MTIF2P46199 727 aaKnown RBP13.72□□□□□ -0.21
SSH3-206ENST00000529224 ZNF132P52740 706 aa13.72□□□□□ -0.21
SSH3-206ENST00000529224 SEC13P55735 322 aa13.72□□□□□ -0.21
SSH3-206ENST00000529224 MRPS21P82921 87 aaKnown RBP13.72□□□□□ -0.21
SSH3-206ENST00000529224 SPEM2Q0P670 501 aa13.72□□□□□ -0.21
SSH3-206ENST00000529224 ADIGQ0VDE8 80 aa13.72□□□□□ -0.21
SSH3-206ENST00000529224 SIM2Q14190 667 aaPredicted RBP13.72□□□□□ -0.21
SSH3-206ENST00000529224 DMC1Q14565 340 aa13.72□□□□□ -0.21
SSH3-206ENST00000529224 HSF5Q4G112 596 aaPredicted RBP13.72□□□□□ -0.21
SSH3-206ENST00000529224 LAIR1Q6GTX8 287 aa13.72□□□□□ -0.21
SSH3-206ENST00000529224 GBP6Q6ZN66 633 aa13.72□□□□□ -0.21
SSH3-206ENST00000529224 Q6ZNB5 142 aa13.72□□□□□ -0.21
SSH3-206ENST00000529224 NUDT18Q6ZVK8 323 aa13.72□□□□□ -0.21
SSH3-206ENST00000529224 ENOSF1Q7L5Y1 443 aa13.72□□□□□ -0.21
SSH3-206ENST00000529224 TMEM25Q86YD3 366 aa13.72□□□□□ -0.21
SSH3-206ENST00000529224 FAM114A1Q8IWE2 563 aa13.72□□□□□ -0.21
SSH3-206ENST00000529224 ETFBKMTQ8IXQ9 262 aa13.72□□□□□ -0.21
SSH3-206ENST00000529224 GPR161Q8N6U8 529 aaKnown RBP13.72□□□□□ -0.21
SSH3-206ENST00000529224 KREMEN1Q96MU8 473 aa13.72□□□□□ -0.21
SSH3-206ENST00000529224 MED15Q96RN5 788 aa13.72□□□□□ -0.21
SSH3-206ENST00000529224 DCLK3Q9C098 648 aa13.72□□□□□ -0.21
SSH3-206ENST00000529224 THAP9Q9H5L6 903 aa13.72□□□□□ -0.21
SSH3-206ENST00000529224 UBE2TQ9NPD8 197 aaPredicted RBP13.72□□□□□ -0.21
SSH3-206ENST00000529224 CNGB3Q9NQW8 809 aa13.72□□□□□ -0.21
SSH3-206ENST00000529224 OLA1Q9NTK5 396 aaKnown RBP13.72□□□□□ -0.21
SSH3-206ENST00000529224 LMBRD1Q9NUN5 540 aa13.72□□□□□ -0.21
SSH3-206ENST00000529224 POLR3BQ9NW08 1133 aaPredicted RBP13.72□□□□□ -0.21
SSH3-206ENST00000529224 MARCH2Q9P0N8 246 aa13.72□□□□□ -0.21
SSH3-206ENST00000529224 WDR35Q9P2L0 1181 aa13.72□□□□□ -0.21
SSH3-206ENST00000529224 DEC1Q9P2X7 70 aa13.72□□□□□ -0.21
SSH3-206ENST00000529224 GMEB2Q9UKD1 530 aa13.72□□□□□ -0.21
SSH3-206ENST00000529224 USP18Q9UMW8 372 aa13.72□□□□□ -0.21
SSH3-206ENST00000529224 SPTBN2O15020 2390 aa13.72□□□□□ -0.21
SSH3-206ENST00000529224 A0A0A0MRY4 1105 aa13.71□□□□□ -0.21
SSH3-206ENST00000529224 GTPBP10A4D1E9 387 aaKnown RBP13.71□□□□□ -0.21
SSH3-206ENST00000529224 M0QYV0 167 aa13.71□□□□□ -0.21
SSH3-206ENST00000529224 APBB3O95704 486 aa13.71□□□□□ -0.21
SSH3-206ENST00000529224 KRT5P13647 590 aa13.71□□□□□ -0.21
SSH3-206ENST00000529224 ERCC5P28715 1186 aaPredicted RBP13.71□□□□□ -0.21
SSH3-206ENST00000529224 PXNP49023 591 aaPredicted RBP13.71□□□□□ -0.21
SSH3-206ENST00000529224 KDSRQ06136 332 aa13.71□□□□□ -0.21
SSH3-206ENST00000529224 EFEMP1Q12805 493 aa13.71□□□□□ -0.21
SSH3-206ENST00000529224 EXOC3L4Q17RC7 722 aa13.71□□□□□ -0.21
SSH3-206ENST00000529224 DPCR1Q3MIW9 517 aa13.71□□□□□ -0.21
SSH3-206ENST00000529224 C2orf27AQ580R0 203 aa13.71□□□□□ -0.21
SSH3-206ENST00000529224 CEP68Q76N32 757 aa13.71□□□□□ -0.21
SSH3-206ENST00000529224 BHLHA9Q7RTU4 235 aa13.71□□□□□ -0.21
SSH3-206ENST00000529224 IRF2BP1Q8IU81 584 aa13.71□□□□□ -0.21
SSH3-206ENST00000529224 SCML4Q8N228 414 aa13.71□□□□□ -0.21
SSH3-206ENST00000529224 NAT16Q8N8M0 369 aa13.71□□□□□ -0.21
SSH3-206ENST00000529224 SLC35F5Q8WV83 523 aa13.71□□□□□ -0.21
SSH3-206ENST00000529224 XPO6Q96QU8 1125 aaKnown RBP13.71□□□□□ -0.21
SSH3-206ENST00000529224 HHIPQ96QV1 700 aa13.71□□□□□ -0.21
SSH3-206ENST00000529224 CRACR2AQ9BSW2 395 aa13.71□□□□□ -0.21
SSH3-206ENST00000529224 BBS2Q9BXC9 721 aa13.71□□□□□ -0.21
SSH3-206ENST00000529224 MARK1Q9P0L2 795 aa13.71□□□□□ -0.21
SSH3-206ENST00000529224 MMP17Q9ULZ9 603 aa13.71□□□□□ -0.21
SSH3-206ENST00000529224 CNTN6Q9UQ52 1028 aa13.71□□□□□ -0.21
SSH3-206ENST00000529224 SLC12A8A0AV02 714 aa13.7□□□□□ -0.22
SSH3-206ENST00000529224 TBC1D3BA6NDS4 549 aa13.7□□□□□ -0.22
SSH3-206ENST00000529224 NEDD8-MDP1E9PL57 170 aa13.7□□□□□ -0.22
SSH3-206ENST00000529224 AXIN1O15169 862 aa13.7□□□□□ -0.22
SSH3-206ENST00000529224 CACNG3O60359 315 aa13.7□□□□□ -0.22
SSH3-206ENST00000529224 TULP3O75386 442 aa13.7□□□□□ -0.22
SSH3-206ENST00000529224 RETP07949 1114 aa13.7□□□□□ -0.22
SSH3-206ENST00000529224 HMBSP08397 361 aa13.7□□□□□ -0.22
SSH3-206ENST00000529224 LCP1P13796 627 aa13.7□□□□□ -0.22
SSH3-206ENST00000529224 TYRP14679 529 aa13.7□□□□□ -0.22
SSH3-206ENST00000529224 SDHBP21912 280 aa13.7□□□□□ -0.22
SSH3-206ENST00000529224 CORO1AP31146 461 aaKnown RBP13.7□□□□□ -0.22
SSH3-206ENST00000529224 ATXN1P54253 815 aaKnown RBP13.7□□□□□ -0.22
SSH3-206ENST00000529224 MFAP3P55082 362 aa13.7□□□□□ -0.22
SSH3-206ENST00000529224 LMNB2Q03252 620 aa13.7□□□□□ -0.22
SSH3-206ENST00000529224 MAN2A1Q16706 1144 aa13.7□□□□□ -0.22
SSH3-206ENST00000529224 CT47A1Q5JQC4 288 aaPredicted RBP13.7□□□□□ -0.22
SSH3-206ENST00000529224 BSPRYQ5W0U4 402 aa13.7□□□□□ -0.22
SSH3-206ENST00000529224 TRIM65Q6PJ69 517 aa13.7□□□□□ -0.22
SSH3-206ENST00000529224 TPGS1Q6ZTW0 290 aa13.7□□□□□ -0.22
SSH3-206ENST00000529224 PHTF2Q8N3S3 785 aa13.7□□□□□ -0.22
SSH3-206ENST00000529224 RNF139Q8WU17 664 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms