RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 PCDHB13Q9Y5F0 798 aa20.08■□□□□ 0.81
SSRP1-204ENST00000529002 METTL12A8MUP2 240 aa20.07■□□□□ 0.8
SSRP1-204ENST00000529002 MDM4O15151 490 aa20.07■□□□□ 0.8
SSRP1-204ENST00000529002 IL12RB1P42701 662 aa20.07■□□□□ 0.8
SSRP1-204ENST00000529002 ABCG1P45844 678 aa20.07■□□□□ 0.8
SSRP1-204ENST00000529002 CDH8P55286 799 aa20.07■□□□□ 0.8
SSRP1-204ENST00000529002 SF3A1Q15459 793 aaKnown RBP20.07■□□□□ 0.8
SSRP1-204ENST00000529002 WDR72Q3MJ13 1102 aa20.07■□□□□ 0.8
SSRP1-204ENST00000529002 DHRS13Q6UX07 377 aa20.07■□□□□ 0.8
SSRP1-204ENST00000529002 LAYNQ6UX15 382 aa20.07■□□□□ 0.8
SSRP1-204ENST00000529002 FAM35AQ86V20 835 aa20.07■□□□□ 0.8
SSRP1-204ENST00000529002 RDH13Q8NBN7 331 aa20.07■□□□□ 0.8
SSRP1-204ENST00000529002 C1orf216Q8TAB5 229 aa20.07■□□□□ 0.8
SSRP1-204ENST00000529002 HPS3Q969F9 1004 aa20.07■□□□□ 0.8
SSRP1-204ENST00000529002 CDC6Q99741 560 aa20.07■□□□□ 0.8
SSRP1-204ENST00000529002 MED10Q9BTT4 135 aa20.07■□□□□ 0.8
SSRP1-204ENST00000529002 IL37Q9NZH6 218 aa20.07■□□□□ 0.8
SSRP1-204ENST00000529002 NXF1Q9UBU9 619 aaKnown RBP20.07■□□□□ 0.8
SSRP1-204ENST00000529002 NUDT5Q9UKK9 219 aa20.07■□□□□ 0.8
SSRP1-204ENST00000529002 RAI2Q9Y5P3 530 aa20.07■□□□□ 0.8
SSRP1-204ENST00000529002 ZNF233A6NK53 670 aa20.06■□□□□ 0.8
SSRP1-204ENST00000529002 FLRT2O43155 660 aa20.06■□□□□ 0.8
SSRP1-204ENST00000529002 TLR5O60602 858 aa20.06■□□□□ 0.8
SSRP1-204ENST00000529002 BEST1O76090 585 aa20.06■□□□□ 0.8
SSRP1-204ENST00000529002 DLATP10515 647 aaKnown RBP20.06■□□□□ 0.8
SSRP1-204ENST00000529002 GJB2P29033 226 aa20.06■□□□□ 0.8
SSRP1-204ENST00000529002 KIF19Q2TAC6 998 aa20.06■□□□□ 0.8
SSRP1-204ENST00000529002 FAM124AQ86V42 546 aa20.06■□□□□ 0.8
SSRP1-204ENST00000529002 TMPRSS6Q8IU80 811 aa20.06■□□□□ 0.8
SSRP1-204ENST00000529002 ZMIZ2Q8NF64 920 aa20.06■□□□□ 0.8
SSRP1-204ENST00000529002 SNX19Q92543 992 aa20.06■□□□□ 0.8
SSRP1-204ENST00000529002 DUSP9Q99956 384 aaKnown RBP20.06■□□□□ 0.8
SSRP1-204ENST00000529002 OLFML3Q9NRN5 406 aa20.06■□□□□ 0.8
SSRP1-204ENST00000529002 OSER1Q9NX31 292 aa20.06■□□□□ 0.8
SSRP1-204ENST00000529002 MARK1Q9P0L2 795 aa20.06■□□□□ 0.8
SSRP1-204ENST00000529002 WDR35Q9P2L0 1181 aa20.06■□□□□ 0.8
SSRP1-204ENST00000529002 SNX11Q9Y5W9 270 aa20.06■□□□□ 0.8
SSRP1-204ENST00000529002 PLK4O00444 970 aa20.05■□□□□ 0.8
SSRP1-204ENST00000529002 GFRA2O00451 464 aa20.05■□□□□ 0.8
SSRP1-204ENST00000529002 PLA2G2AP14555 144 aa20.05■□□□□ 0.8
SSRP1-204ENST00000529002 TUBP50607 506 aa20.05■□□□□ 0.8
SSRP1-204ENST00000529002 MYL6P60660 151 aa20.05■□□□□ 0.8
SSRP1-204ENST00000529002 TNNC1P63316 161 aa20.05■□□□□ 0.8
SSRP1-204ENST00000529002 SV2BQ7L1I2 683 aa20.05■□□□□ 0.8
SSRP1-204ENST00000529002 METTL3Q86U44 580 aaKnown RBP20.05■□□□□ 0.8
SSRP1-204ENST00000529002 WDR49Q8IV35 697 aa20.05■□□□□ 0.8
SSRP1-204ENST00000529002 GALNT15Q8N3T1 639 aa20.05■□□□□ 0.8
SSRP1-204ENST00000529002 PDCD7Q8N8D1 485 aaKnown RBP20.05■□□□□ 0.8
SSRP1-204ENST00000529002 CADM4Q8NFZ8 388 aa20.05■□□□□ 0.8
SSRP1-204ENST00000529002 SMYD3Q9H7B4 428 aa20.05■□□□□ 0.8
SSRP1-204ENST00000529002 PANK4Q9NVE7 773 aa20.05■□□□□ 0.8
SSRP1-204ENST00000529002 HSPBP1Q9NZL4 362 aa20.05■□□□□ 0.8
SSRP1-204ENST00000529002 NFE2L3Q9Y4A8 694 aa20.05■□□□□ 0.8
SSRP1-204ENST00000529002 TNNI1P19237 187 aa20.04■□□□□ 0.8
SSRP1-204ENST00000529002 HOXD13P35453 343 aa20.04■□□□□ 0.8
SSRP1-204ENST00000529002 IL9RQ01113 521 aa20.04■□□□□ 0.8
SSRP1-204ENST00000529002 ORC1Q13415 861 aa20.04■□□□□ 0.8
SSRP1-204ENST00000529002 STARD3Q14849 445 aa20.04■□□□□ 0.8
SSRP1-204ENST00000529002 SMAD1Q15797 465 aaKnown RBP20.04■□□□□ 0.8
SSRP1-204ENST00000529002 PTPRNQ16849 979 aa20.04■□□□□ 0.8
SSRP1-204ENST00000529002 GEN1Q17RS7 908 aa20.04■□□□□ 0.8
SSRP1-204ENST00000529002 IL27RAQ6UWB1 636 aa20.04■□□□□ 0.8
SSRP1-204ENST00000529002 ZNF516Q92618 1163 aa20.04■□□□□ 0.8
SSRP1-204ENST00000529002 CCDC127Q96BQ5 260 aa20.04■□□□□ 0.8
SSRP1-204ENST00000529002 SIPA1Q96FS4 1042 aa20.04■□□□□ 0.8
SSRP1-204ENST00000529002 CLIC6Q96NY7 704 aa20.04■□□□□ 0.8
SSRP1-204ENST00000529002 SMOQ99835 787 aa20.04■□□□□ 0.8
SSRP1-204ENST00000529002 PANK2Q9BZ23 570 aa20.04■□□□□ 0.8
SSRP1-204ENST00000529002 C6orf106Q9H6K1 298 aaPredicted RBP20.04■□□□□ 0.8
SSRP1-204ENST00000529002 KRT82Q9NSB4 513 aa20.04■□□□□ 0.8
SSRP1-204ENST00000529002 STK17AQ9UEE5 414 aa20.04■□□□□ 0.8
SSRP1-204ENST00000529002 KIF3AQ9Y496 699 aa20.04■□□□□ 0.8
SSRP1-204ENST00000529002 PCDHGB2Q9Y5G2 931 aa20.04■□□□□ 0.8
SSRP1-204ENST00000529002 PLXNA2O75051 1894 aa20.03■□□□□ 0.8
SSRP1-204ENST00000529002 FAM92AA1XBS5 289 aa20.03■□□□□ 0.8
SSRP1-204ENST00000529002 FRMD3A2A2Y4 597 aa20.03■□□□□ 0.8
SSRP1-204ENST00000529002 ATXN7O15265 892 aaPredicted RBP20.03■□□□□ 0.8
SSRP1-204ENST00000529002 TLX3O43711 291 aaPredicted RBP20.03■□□□□ 0.8
SSRP1-204ENST00000529002 AP1G2O75843 785 aa20.03■□□□□ 0.8
SSRP1-204ENST00000529002 COPAP53621 1224 aa20.03■□□□□ 0.8
SSRP1-204ENST00000529002 SURF1Q15526 300 aa20.03■□□□□ 0.8
SSRP1-204ENST00000529002 KCNT1Q5JUK3 1230 aa20.03■□□□□ 0.8
SSRP1-204ENST00000529002 RRAGBQ5VZM2 374 aa20.03■□□□□ 0.8
SSRP1-204ENST00000529002 FUKQ8N0W3 1084 aa20.03■□□□□ 0.8
SSRP1-204ENST00000529002 SDCBP2Q9H190 292 aa20.03■□□□□ 0.8
SSRP1-204ENST00000529002 PRORYQ9H606 182 aa20.03■□□□□ 0.8
SSRP1-204ENST00000529002 DMAP1Q9NPF5 467 aaPredicted RBP20.03■□□□□ 0.8
SSRP1-204ENST00000529002 THAP10Q9P2Z0 257 aaPredicted RBP20.03■□□□□ 0.8
SSRP1-204ENST00000529002 ZNF462Q96JM2 2506 aa20.03■□□□□ 0.8
SSRP1-204ENST00000529002 TNFSF14O43557 240 aa20.02■□□□□ 0.8
SSRP1-204ENST00000529002 CCDC130P13994 396 aa20.02■□□□□ 0.8
SSRP1-204ENST00000529002 PRKCHP24723 683 aa20.02■□□□□ 0.8
SSRP1-204ENST00000529002 GPRIN1Q7Z2K8 1008 aa20.02■□□□□ 0.8
SSRP1-204ENST00000529002 SORCS1Q8WY21 1168 aa20.02■□□□□ 0.8
SSRP1-204ENST00000529002 GZF1Q9H116 711 aaPredicted RBP20.02■□□□□ 0.8
SSRP1-204ENST00000529002 XYLT2Q9H1B5 865 aa20.02■□□□□ 0.8
SSRP1-204ENST00000529002 CCDC39Q9UFE4 941 aa20.02■□□□□ 0.8
SSRP1-204ENST00000529002 FBXO10Q9UK96 956 aa20.02■□□□□ 0.8
SSRP1-204ENST00000529002 CLEC4EQ9ULY5 219 aa20.02■□□□□ 0.8
SSRP1-204ENST00000529002 CLIC4Q9Y696 253 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms