RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 HDAC7Q8WUI4 952 aa25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 CASP10Q92851 521 aa25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 ZNF707Q96C28 371 aaPredicted RBP25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 CDCA3Q99618 268 aaPredicted RBP25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 TLR10Q9BXR5 811 aa25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 DNMT3BQ9UBC3 853 aaKnown RBP25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 PCSK1NQ9UHG2 260 aa25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 AMFRQ9UKV5 643 aa25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 JRKLQ9Y4A0 524 aa25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 DOCK6Q96HP0 2047 aa25.8■■□□□ 1.72
LDLRAD3-203ENST00000528989 TMEM265A0A087WTH1 108 aa25.8■■□□□ 1.72
LDLRAD3-203ENST00000528989 GJA1P17302 382 aa25.8■■□□□ 1.72
LDLRAD3-203ENST00000528989 IGFBP4P22692 258 aa25.8■■□□□ 1.72
LDLRAD3-203ENST00000528989 MARCKSL1P49006 195 aa25.8■■□□□ 1.72
LDLRAD3-203ENST00000528989 RTL10Q7L3V2 364 aa25.8■■□□□ 1.72
LDLRAD3-203ENST00000528989 RSRC2Q7L4I2 434 aaKnown RBP25.8■■□□□ 1.72
LDLRAD3-203ENST00000528989 ARHGAP18Q8N392 663 aa25.8■■□□□ 1.72
LDLRAD3-203ENST00000528989 DQX1Q8TE96 717 aaKnown RBP25.8■■□□□ 1.72
LDLRAD3-203ENST00000528989 CENPIQ92674 756 aaPredicted RBP25.8■■□□□ 1.72
LDLRAD3-203ENST00000528989 KRT35Q92764 455 aa25.8■■□□□ 1.72
LDLRAD3-203ENST00000528989 PPP2R3CQ969Q6 453 aa25.8■■□□□ 1.72
LDLRAD3-203ENST00000528989 PSMB7Q99436 277 aa25.8■■□□□ 1.72
LDLRAD3-203ENST00000528989 APOL5Q9BWW9 433 aa25.8■■□□□ 1.72
LDLRAD3-203ENST00000528989 MYO16Q9Y6X6 1858 aa25.8■■□□□ 1.72
LDLRAD3-203ENST00000528989 C2orf78A6NCI8 922 aa25.79■■□□□ 1.72
LDLRAD3-203ENST00000528989 IL1R2P27930 398 aa25.79■■□□□ 1.72
LDLRAD3-203ENST00000528989 GABRR2P28476 465 aa25.79■■□□□ 1.72
LDLRAD3-203ENST00000528989 HOXA9P31269 272 aa25.79■■□□□ 1.72
LDLRAD3-203ENST00000528989 CCR2P41597 374 aa25.79■■□□□ 1.72
LDLRAD3-203ENST00000528989 NTHL1P78549 312 aa25.79■■□□□ 1.72
LDLRAD3-203ENST00000528989 ATP13A4Q4VNC1 1196 aa25.79■■□□□ 1.72
LDLRAD3-203ENST00000528989 TAC4Q86UU9 113 aa25.79■■□□□ 1.72
LDLRAD3-203ENST00000528989 CD101Q93033 1021 aa25.79■■□□□ 1.72
LDLRAD3-203ENST00000528989 PRKD2Q9BZL6 878 aa25.79■■□□□ 1.72
LDLRAD3-203ENST00000528989 CLIC5Q9NZA1 410 aa25.79■■□□□ 1.72
LDLRAD3-203ENST00000528989 TRPM5Q9NZQ8 1165 aa25.79■■□□□ 1.72
LDLRAD3-203ENST00000528989 DPP7Q9UHL4 492 aa25.79■■□□□ 1.72
LDLRAD3-203ENST00000528989 STAP1Q9ULZ2 295 aa25.79■■□□□ 1.72
LDLRAD3-203ENST00000528989 MSI1O43347 362 aaKnown RBP25.79■■□□□ 1.72
LDLRAD3-203ENST00000528989 TLR5O60602 858 aa25.79■■□□□ 1.72
LDLRAD3-203ENST00000528989 RNF8O76064 485 aa25.79■■□□□ 1.72
LDLRAD3-203ENST00000528989 TRUB2O95900 331 aaKnown RBP25.79■■□□□ 1.72
LDLRAD3-203ENST00000528989 MIPP30301 263 aa25.79■■□□□ 1.72
LDLRAD3-203ENST00000528989 MAN1A1P33908 653 aa25.79■■□□□ 1.72
LDLRAD3-203ENST00000528989 SLC1A1P43005 524 aa25.79■■□□□ 1.72
LDLRAD3-203ENST00000528989 PSEN1P49768 467 aa25.79■■□□□ 1.72
LDLRAD3-203ENST00000528989 SCYL2Q6P3W7 929 aa25.79■■□□□ 1.72
LDLRAD3-203ENST00000528989 BEND5Q7L4P6 421 aa25.79■■□□□ 1.72
LDLRAD3-203ENST00000528989 BNIPLQ7Z465 357 aa25.79■■□□□ 1.72
LDLRAD3-203ENST00000528989 RNF139Q8WU17 664 aa25.79■■□□□ 1.72
LDLRAD3-203ENST00000528989 PIGVQ9NUD9 493 aa25.79■■□□□ 1.72
LDLRAD3-203ENST00000528989 ZDHHC7Q9NXF8 308 aa25.79■■□□□ 1.72
LDLRAD3-203ENST00000528989 UXTQ9UBK9 157 aaPredicted RBP25.79■■□□□ 1.72
LDLRAD3-203ENST00000528989 HNRNPA1P09651 372 aaKnown RBP eCLIP25.78■■□□□ 1.72
LDLRAD3-203ENST00000528989 MYL4P12829 197 aa25.78■■□□□ 1.72
LDLRAD3-203ENST00000528989 C10orf120Q5SQS8 335 aa25.78■■□□□ 1.72
LDLRAD3-203ENST00000528989 SNX30Q5VWJ9 437 aa25.78■■□□□ 1.72
LDLRAD3-203ENST00000528989 GRASPQ7Z6J2 395 aaPredicted RBP25.78■■□□□ 1.72
LDLRAD3-203ENST00000528989 PDZD8Q8NEN9 1154 aa25.78■■□□□ 1.72
LDLRAD3-203ENST00000528989 OVCA2Q8WZ82 227 aa25.78■■□□□ 1.72
LDLRAD3-203ENST00000528989 TCEAL4Q96EI5 215 aa25.78■■□□□ 1.72
LDLRAD3-203ENST00000528989 HES6Q96HZ4 224 aa25.78■■□□□ 1.72
LDLRAD3-203ENST00000528989 PEBP4Q96S96 227 aa25.78■■□□□ 1.72
LDLRAD3-203ENST00000528989 ASAH2Q9NR71 780 aa25.78■■□□□ 1.72
LDLRAD3-203ENST00000528989 DDIT4Q9NX09 232 aa25.78■■□□□ 1.72
LDLRAD3-203ENST00000528989 CDH22Q9UJ99 828 aa25.78■■□□□ 1.72
LDLRAD3-203ENST00000528989 A0A1W2PRU2 124 aa25.77■■□□□ 1.72
LDLRAD3-203ENST00000528989 PTPN2P17706 415 aa25.77■■□□□ 1.72
LDLRAD3-203ENST00000528989 CASQ1P31415 396 aa25.77■■□□□ 1.72
LDLRAD3-203ENST00000528989 GJC1P36383 396 aa25.77■■□□□ 1.72
LDLRAD3-203ENST00000528989 EFEMP1Q12805 493 aa25.77■■□□□ 1.72
LDLRAD3-203ENST00000528989 FAM131BQ86XD5 332 aa25.77■■□□□ 1.72
LDLRAD3-203ENST00000528989 ACSF2Q96CM8 615 aaPredicted RBP25.77■■□□□ 1.72
LDLRAD3-203ENST00000528989 CYP2S1Q96SQ9 504 aa25.77■■□□□ 1.72
LDLRAD3-203ENST00000528989 RNF38Q9H0F5 515 aa25.77■■□□□ 1.72
LDLRAD3-203ENST00000528989 LMCD1Q9NZU5 365 aa25.77■■□□□ 1.72
LDLRAD3-203ENST00000528989 UNC80Q8N2C7 3258 aa25.77■■□□□ 1.72
LDLRAD3-203ENST00000528989 RHOP08100 348 aa25.77■■□□□ 1.72
LDLRAD3-203ENST00000528989 RALAP11233 206 aa25.77■■□□□ 1.72
LDLRAD3-203ENST00000528989 CXCR5P32302 372 aa25.77■■□□□ 1.72
LDLRAD3-203ENST00000528989 CYP4F8P98187 520 aa25.77■■□□□ 1.72
LDLRAD3-203ENST00000528989 ACAP1Q15027 740 aa25.77■■□□□ 1.72
LDLRAD3-203ENST00000528989 SMTNL2Q2TAL5 461 aa25.77■■□□□ 1.72
LDLRAD3-203ENST00000528989 KCNT1Q5JUK3 1230 aa25.77■■□□□ 1.72
LDLRAD3-203ENST00000528989 STXBP5Q5T5C0 1151 aa25.77■■□□□ 1.72
LDLRAD3-203ENST00000528989 TXNDC8Q6A555 127 aa25.77■■□□□ 1.72
LDLRAD3-203ENST00000528989 MIB1Q86YT6 1006 aa25.77■■□□□ 1.72
LDLRAD3-203ENST00000528989 EFHBQ8N7U6 833 aa25.77■■□□□ 1.72
LDLRAD3-203ENST00000528989 ALG3Q92685 438 aa25.77■■□□□ 1.72
LDLRAD3-203ENST00000528989 TRIM62Q9BVG3 475 aa25.77■■□□□ 1.72
LDLRAD3-203ENST00000528989 MAGEB5Q9BZ81 275 aa25.77■■□□□ 1.72
LDLRAD3-203ENST00000528989 FAM204AQ9H8W3 233 aa25.77■■□□□ 1.72
LDLRAD3-203ENST00000528989 ZWILCHQ9H900 591 aa25.77■■□□□ 1.72
LDLRAD3-203ENST00000528989 TMPRSS4Q9NRS4 437 aa25.77■■□□□ 1.72
LDLRAD3-203ENST00000528989 USP18Q9UMW8 372 aa25.77■■□□□ 1.72
LDLRAD3-203ENST00000528989 DDX3YO15523 660 aaKnown RBP25.76■■□□□ 1.71
LDLRAD3-203ENST00000528989 COCHO43405 550 aa25.76■■□□□ 1.71
LDLRAD3-203ENST00000528989 XYLBO75191 536 aa25.76■■□□□ 1.71
LDLRAD3-203ENST00000528989 ENDOD1O94919 500 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms