RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 MARK1Q9P0L2 795 aa12.2□□□□□ -0.46
CMTM1-211ENST00000528484 ZNF510Q9Y2H8 683 aa12.2□□□□□ -0.46
CMTM1-211ENST00000528484 RAD54BQ9Y620 910 aa12.2□□□□□ -0.46
CMTM1-211ENST00000528484 FAM92AA1XBS5 289 aa12.19□□□□□ -0.46
CMTM1-211ENST00000528484 TRIM24O15164 1050 aa12.19□□□□□ -0.46
CMTM1-211ENST00000528484 FAM200BP0CF97 657 aa12.19□□□□□ -0.46
CMTM1-211ENST00000528484 PLA2G4AP47712 749 aa12.19□□□□□ -0.46
CMTM1-211ENST00000528484 MAP3K7CLP57077 242 aa12.19□□□□□ -0.46
CMTM1-211ENST00000528484 ARID5AQ03989 594 aa12.19□□□□□ -0.46
CMTM1-211ENST00000528484 NCOA4Q13772 614 aa12.19□□□□□ -0.46
CMTM1-211ENST00000528484 SUZ12Q15022 739 aaKnown RBP12.19□□□□□ -0.46
CMTM1-211ENST00000528484 STK38Q15208 465 aa12.19□□□□□ -0.46
CMTM1-211ENST00000528484 C8orf34Q49A92 452 aa12.19□□□□□ -0.46
CMTM1-211ENST00000528484 TOGARAM2Q6ZUX3 1019 aa12.19□□□□□ -0.46
CMTM1-211ENST00000528484 GLRX5Q86SX6 157 aa12.19□□□□□ -0.46
CMTM1-211ENST00000528484 METTL3Q86U44 580 aaKnown RBP12.19□□□□□ -0.46
CMTM1-211ENST00000528484 NELFCDQ8IXH7 590 aa12.19□□□□□ -0.46
CMTM1-211ENST00000528484 ZCCHC9Q8N567 271 aaKnown RBP12.19□□□□□ -0.46
CMTM1-211ENST00000528484 IQUBQ8NA54 791 aa12.19□□□□□ -0.46
CMTM1-211ENST00000528484 CADM4Q8NFZ8 388 aa12.19□□□□□ -0.46
CMTM1-211ENST00000528484 GOLGA5Q8TBA6 731 aa12.19□□□□□ -0.46
CMTM1-211ENST00000528484 ZNF507Q8TCN5 953 aa12.19□□□□□ -0.46
CMTM1-211ENST00000528484 BHMTQ93088 406 aa12.19□□□□□ -0.46
CMTM1-211ENST00000528484 HPS3Q969F9 1004 aa12.19□□□□□ -0.46
CMTM1-211ENST00000528484 CDK5RAP1Q96SZ6 601 aaKnown RBP12.19□□□□□ -0.46
CMTM1-211ENST00000528484 ACOX2Q99424 681 aa12.19□□□□□ -0.46
CMTM1-211ENST00000528484 GPR174Q9BXC1 333 aa12.19□□□□□ -0.46
CMTM1-211ENST00000528484 TRIM9Q9C026 710 aa12.19□□□□□ -0.46
CMTM1-211ENST00000528484 SMYD3Q9H7B4 428 aa12.19□□□□□ -0.46
CMTM1-211ENST00000528484 VRTNQ9H8Y1 702 aa12.19□□□□□ -0.46
CMTM1-211ENST00000528484 DNMT3LQ9UJW3 386 aa12.19□□□□□ -0.46
CMTM1-211ENST00000528484 NME7Q9Y5B8 376 aa12.19□□□□□ -0.46
CMTM1-211ENST00000528484 MORC2Q9Y6X9 1032 aaPredicted RBP12.19□□□□□ -0.46
CMTM1-211ENST00000528484 PRRT4C9JH25 899 aa12.18□□□□□ -0.46
CMTM1-211ENST00000528484 BCAT2O15382 392 aaPredicted RBP12.18□□□□□ -0.46
CMTM1-211ENST00000528484 STX6O43752 255 aa12.18□□□□□ -0.46
CMTM1-211ENST00000528484 GJB3O75712 270 aa12.18□□□□□ -0.46
CMTM1-211ENST00000528484 CD2BP2O95400 341 aaKnown RBP12.18□□□□□ -0.46
CMTM1-211ENST00000528484 CYBBP04839 570 aa12.18□□□□□ -0.46
CMTM1-211ENST00000528484 ZNF883P0CG24 379 aa12.18□□□□□ -0.46
CMTM1-211ENST00000528484 MAOBP27338 520 aa12.18□□□□□ -0.46
CMTM1-211ENST00000528484 CHKAP35790 457 aa12.18□□□□□ -0.46
CMTM1-211ENST00000528484 CDH8P55286 799 aa12.18□□□□□ -0.46
CMTM1-211ENST00000528484 SLC39A14Q15043 492 aa12.18□□□□□ -0.46
CMTM1-211ENST00000528484 COL28A1Q2UY09 1125 aa12.18□□□□□ -0.46
CMTM1-211ENST00000528484 C10orf120Q5SQS8 335 aa12.18□□□□□ -0.46
CMTM1-211ENST00000528484 ACOT1Q86TX2 421 aa12.18□□□□□ -0.46
CMTM1-211ENST00000528484 FUKQ8N0W3 1084 aa12.18□□□□□ -0.46
CMTM1-211ENST00000528484 GALNT15Q8N3T1 639 aa12.18□□□□□ -0.46
CMTM1-211ENST00000528484 GLIS3Q8NEA6 775 aa12.18□□□□□ -0.46
CMTM1-211ENST00000528484 SLC2A14Q8TDB8 520 aa12.18□□□□□ -0.46
CMTM1-211ENST00000528484 DNASE2BQ8WZ79 361 aa12.18□□□□□ -0.46
CMTM1-211ENST00000528484 PRCCQ92733 491 aaPredicted RBP12.18□□□□□ -0.46
CMTM1-211ENST00000528484 SIPA1Q96FS4 1042 aa12.18□□□□□ -0.46
CMTM1-211ENST00000528484 NUP58Q9BVL2 599 aa12.18□□□□□ -0.46
CMTM1-211ENST00000528484 XYLT2Q9H1B5 865 aa12.18□□□□□ -0.46
CMTM1-211ENST00000528484 ZSCAN16Q9H4T2 348 aaPredicted RBP12.18□□□□□ -0.46
CMTM1-211ENST00000528484 GAREM1Q9H706 876 aa12.18□□□□□ -0.46
CMTM1-211ENST00000528484 MAGEF1Q9HAY2 307 aa12.18□□□□□ -0.46
CMTM1-211ENST00000528484 CYLDQ9NQC7 956 aa12.18□□□□□ -0.46
CMTM1-211ENST00000528484 TM7SF3Q9NS93 570 aa12.18□□□□□ -0.46
CMTM1-211ENST00000528484 KIAA1522Q9P206 1035 aaPredicted RBP12.18□□□□□ -0.46
CMTM1-211ENST00000528484 TFIP11Q9UBB9 837 aaKnown RBP12.18□□□□□ -0.46
CMTM1-211ENST00000528484 PCOLCE2Q9UKZ9 415 aa12.18□□□□□ -0.46
CMTM1-211ENST00000528484 SCML2Q9UQR0 700 aa12.18□□□□□ -0.46
CMTM1-211ENST00000528484 PCDHA5Q9Y5H7 936 aa12.18□□□□□ -0.46
CMTM1-211ENST00000528484 STON1Q9Y6Q2 735 aa12.18□□□□□ -0.46
CMTM1-211ENST00000528484 A0A087X0B3 334 aa12.17□□□□□ -0.46
CMTM1-211ENST00000528484 FLRT2O43155 660 aa12.17□□□□□ -0.46
CMTM1-211ENST00000528484 TGFB1I1O43294 461 aa12.17□□□□□ -0.46
CMTM1-211ENST00000528484 RALAP11233 206 aa12.17□□□□□ -0.46
CMTM1-211ENST00000528484 RARGP13631 454 aa12.17□□□□□ -0.46
CMTM1-211ENST00000528484 CCDC130P13994 396 aa12.17□□□□□ -0.46
CMTM1-211ENST00000528484 PSEN1P49768 467 aa12.17□□□□□ -0.46
CMTM1-211ENST00000528484 TEAD4Q15561 434 aa12.17□□□□□ -0.46
CMTM1-211ENST00000528484 SGSM1Q2NKQ1 1148 aa12.17□□□□□ -0.46
CMTM1-211ENST00000528484 INAVAQ3KP66 663 aa12.17□□□□□ -0.46
CMTM1-211ENST00000528484 FUT11Q495W5 492 aa12.17□□□□□ -0.46
CMTM1-211ENST00000528484 DCAF12L1Q5VU92 463 aa12.17□□□□□ -0.46
CMTM1-211ENST00000528484 KLHDC10Q6PID8 442 aa12.17□□□□□ -0.46
CMTM1-211ENST00000528484 EPM2AIP1Q7L775 607 aaPredicted RBP12.17□□□□□ -0.46
CMTM1-211ENST00000528484 UNC93AQ86WB7 457 aa12.17□□□□□ -0.46
CMTM1-211ENST00000528484 MDM1Q8TC05 714 aa12.17□□□□□ -0.46
CMTM1-211ENST00000528484 RHBDD1Q8TEB9 315 aa12.17□□□□□ -0.46
CMTM1-211ENST00000528484 SNX19Q92543 992 aa12.17□□□□□ -0.46
CMTM1-211ENST00000528484 JAKMIP2Q96AA8 810 aa12.17□□□□□ -0.46
CMTM1-211ENST00000528484 DHX58Q96C10 678 aa12.17□□□□□ -0.46
CMTM1-211ENST00000528484 KLF16Q9BXK1 252 aaPredicted RBP12.17□□□□□ -0.46
CMTM1-211ENST00000528484 IMPG2Q9BZV3 1241 aa12.17□□□□□ -0.46
CMTM1-211ENST00000528484 DCLK3Q9C098 648 aa12.17□□□□□ -0.46
CMTM1-211ENST00000528484 SLC6A17Q9H1V8 727 aa12.17□□□□□ -0.46
CMTM1-211ENST00000528484 CSNK1G1Q9HCP0 422 aa12.17□□□□□ -0.46
CMTM1-211ENST00000528484 KBTBD4Q9NVX7 518 aa12.17□□□□□ -0.46
CMTM1-211ENST00000528484 WSB2Q9NYS7 404 aaPredicted RBP12.17□□□□□ -0.46
CMTM1-211ENST00000528484 CILPO75339 1184 aa12.16□□□□□ -0.46
CMTM1-211ENST00000528484 TBX18O95935 607 aa12.16□□□□□ -0.46
CMTM1-211ENST00000528484 RPN1P04843 607 aaKnown RBP12.16□□□□□ -0.46
CMTM1-211ENST00000528484 ACO1P21399 889 aaKnown RBP12.16□□□□□ -0.46
CMTM1-211ENST00000528484 ADORA2BP29275 332 aa12.16□□□□□ -0.46
CMTM1-211ENST00000528484 HOXD13P35453 343 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms