RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 H3BRJ5 948 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 EBAG9O00559 213 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 NDUFAB1O14561 156 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 TRAPPC3O43617 180 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 MGEA5O60502 916 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 SPAG6O75602 509 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 B3GAT3O94766 335 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 FAM107AO95990 144 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 ZBED1O96006 694 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 ACAT1P24752 427 aaKnown RBP15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 MAP2K2P36507 400 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 MAP3K7CLP57077 242 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 FAM189BP81408 668 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 RNASELQ05823 741 aaKnown RBP15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 SKIDA1Q1XH10 827 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 TIGD5Q53EQ6 642 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 DCAF6Q58WW2 860 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 C1orf228Q6PIY5 440 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 MICALCLQ6ZW33 695 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 SLC24A5Q71RS6 500 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 PDZD4Q76G19 769 aaPredicted RBP15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 TADA2BQ86TJ2 420 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 PRUNE1Q86TP1 453 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 CNPY4Q8N129 248 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 ATP11CQ8NB49 1132 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 SLAIN1Q8ND83 568 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 UHMK1Q8TAS1 419 aaKnown RBP15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 PYROXD1Q8WU10 500 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 ARHGEF2Q92974 986 aaKnown RBP15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 NTAN1Q96AB6 310 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 PCED1BQ96HM7 432 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 SUSD3Q96L08 255 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 C9orf72Q96LT7 481 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 KLC2Q9H0B6 622 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 CCDC134Q9H6E4 229 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 CREBZFQ9NS37 354 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 KRT82Q9NSB4 513 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 SENP1Q9P0U3 644 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 CASTOR2A6NHX0 329 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 CLDN5O00501 218 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 CAPN9O14815 690 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 AOC2O75106 756 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 CKBP12277 381 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 MAGEA6P43360 314 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 HCAR3P49019 387 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 GDF10P55107 478 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 DAOAP59103 153 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 IFI35P80217 286 aaPredicted RBP15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 DEUP1Q05D60 604 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 PDIA2Q13087 525 aaKnown RBP15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 LONRF1Q17RB8 773 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 ARL13BQ3SXY8 428 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 RAB6CQ53S08 254 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 SLC45A4Q5BKX6 768 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 PPP6R3Q5H9R7 873 aaPredicted RBP15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 INTS6LQ5JSJ4 861 aaKnown RBP15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 KIAA0319Q5VV43 1072 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 EXOC3L1Q86VI1 746 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 ZC3H18Q86VM9 953 aaKnown RBP15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 SMOQ99835 787 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 RAB6CQ9H0N0 254 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 HMX1Q9NP08 348 aaPredicted RBP15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 TRMT13Q9NUP7 481 aaKnown RBP15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 MTMR10Q9NXD2 777 aa15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 XPO7Q9UIA9 1087 aaKnown RBP15.34■□□□□ 0.05
ECHDC1-220ENST00000528402 THSD7BQ9C0I4 1608 aa15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 MYBPHLA2RUH7 354 aa15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 C5orf60A6NFR6 353 aa15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 SMIM23A6NLE4 172 aa15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 TMEM189-UBE2V1I3L0A0 370 aa15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 GCATO75600 419 aa15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 BEST1O76090 585 aa15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 GSTA2P09210 222 aa15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 SLCO1A2P46721 670 aa15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 TSPY1Q01534 308 aa15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 CA9Q16790 459 aa15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 KLHL38Q2WGJ6 581 aa15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 EFHC2Q5JST6 749 aa15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 PM20D1Q6GTS8 502 aa15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 GLB1LQ6UWU2 654 aa15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 NPNTQ6UXI9 565 aa15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 NLRP14Q86W24 1093 aa15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 ZBED8Q8IZ13 594 aa15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 RNF169Q8NCN4 708 aa15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 MCUQ8NE86 351 aa15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 URGCPQ8TCY9 931 aa15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 CD99L2Q8TCZ2 262 aa15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 LRRC39Q96DD0 335 aa15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 CSPG4P5Q96PW8 444 aa15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 XPO6Q96QU8 1125 aaKnown RBP15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 CCT8L2Q96SF2 557 aa15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 KCTD15Q96SI1 283 aaPredicted RBP15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 LRRC4CQ9HCJ2 640 aa15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 INTS9Q9NV88 658 aaKnown RBP15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 DNAJC17Q9NVM6 304 aaKnown RBP15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 GPATCH2LQ9NWQ4 482 aa15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 PRDM4Q9UKN5 801 aa15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 PCDHB8Q9UN66 801 aa15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 HEY1Q9Y5J3 304 aa15.33■□□□□ 0.04
ECHDC1-220ENST00000528402 EXOC1LA0A1B0GW35 172 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms