RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 YWHAGP61981 247 aaKnown RBP eCLIP20.24■□□□□ 0.83
CAPN1-211ENST00000527739 KCNH2Q12809 1159 aa20.24■□□□□ 0.83
CAPN1-211ENST00000527739 PREPLQ4J6C6 727 aaPredicted RBP20.24■□□□□ 0.83
CAPN1-211ENST00000527739 KLHDC10Q6PID8 442 aa20.24■□□□□ 0.83
CAPN1-211ENST00000527739 RRAGAQ7L523 313 aa20.24■□□□□ 0.83
CAPN1-211ENST00000527739 KBTBD6Q86V97 674 aa20.24■□□□□ 0.83
CAPN1-211ENST00000527739 TXNDC5Q8NBS9 432 aaKnown RBP20.24■□□□□ 0.83
CAPN1-211ENST00000527739 NDRG1Q92597 394 aaKnown RBP20.24■□□□□ 0.83
CAPN1-211ENST00000527739 BHMTQ93088 406 aa20.24■□□□□ 0.83
CAPN1-211ENST00000527739 IPO9Q96P70 1041 aaKnown RBP20.24■□□□□ 0.83
CAPN1-211ENST00000527739 XPO6Q96QU8 1125 aaKnown RBP20.24■□□□□ 0.83
CAPN1-211ENST00000527739 TPSD1Q9BZJ3 242 aa20.24■□□□□ 0.83
CAPN1-211ENST00000527739 ULBP1Q9BZM6 244 aa20.24■□□□□ 0.83
CAPN1-211ENST00000527739 DNAJC17Q9NVM6 304 aaKnown RBP20.24■□□□□ 0.83
CAPN1-211ENST00000527739 KIAA1468Q9P260 1216 aa20.24■□□□□ 0.83
CAPN1-211ENST00000527739 KIAA1257Q9ULG3 409 aa20.24■□□□□ 0.83
CAPN1-211ENST00000527739 STRIP2Q9ULQ0 834 aa20.24■□□□□ 0.83
CAPN1-211ENST00000527739 MMP17Q9ULZ9 603 aa20.24■□□□□ 0.83
CAPN1-211ENST00000527739 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.24■□□□□ 0.83
CAPN1-211ENST00000527739 XPO1O14980 1071 aaKnown RBP20.23■□□□□ 0.83
CAPN1-211ENST00000527739 GREM1O60565 184 aa20.23■□□□□ 0.83
CAPN1-211ENST00000527739 COG7P83436 770 aa20.23■□□□□ 0.83
CAPN1-211ENST00000527739 BST2Q10589 180 aaKnown RBP20.23■□□□□ 0.83
CAPN1-211ENST00000527739 RAB41Q5JT25 222 aa20.23■□□□□ 0.83
CAPN1-211ENST00000527739 C10orf76Q5T2E6 689 aa20.23■□□□□ 0.83
CAPN1-211ENST00000527739 GRAMD4Q6IC98 578 aa20.23■□□□□ 0.83
CAPN1-211ENST00000527739 ANO7Q6IWH7 933 aa20.23■□□□□ 0.83
CAPN1-211ENST00000527739 TRIML1Q8N9V2 468 aa20.23■□□□□ 0.83
CAPN1-211ENST00000527739 EHBP1Q8NDI1 1231 aa20.23■□□□□ 0.83
CAPN1-211ENST00000527739 KAT5Q92993 513 aa20.23■□□□□ 0.83
CAPN1-211ENST00000527739 SEMA4GQ9NTN9 838 aa20.23■□□□□ 0.83
CAPN1-211ENST00000527739 WDR35Q9P2L0 1181 aa20.23■□□□□ 0.83
CAPN1-211ENST00000527739 ATG2BQ96BY7 2078 aa20.23■□□□□ 0.83
CAPN1-211ENST00000527739 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.22■□□□□ 0.83
CAPN1-211ENST00000527739 SLC12A8A0AV02 714 aa20.22■□□□□ 0.83
CAPN1-211ENST00000527739 DCLK1O15075 740 aa20.22■□□□□ 0.83
CAPN1-211ENST00000527739 TRIM24O15164 1050 aa20.22■□□□□ 0.83
CAPN1-211ENST00000527739 PMM2O15305 246 aa20.22■□□□□ 0.83
CAPN1-211ENST00000527739 P4HA2O15460 535 aa20.22■□□□□ 0.83
CAPN1-211ENST00000527739 GDF9O60383 454 aa20.22■□□□□ 0.83
CAPN1-211ENST00000527739 KRT37O76014 449 aa20.22■□□□□ 0.83
CAPN1-211ENST00000527739 STC2O76061 302 aa20.22■□□□□ 0.83
CAPN1-211ENST00000527739 AFPP02771 609 aaKnown RBP20.22■□□□□ 0.83
CAPN1-211ENST00000527739 LCP1P13796 627 aa20.22■□□□□ 0.83
CAPN1-211ENST00000527739 TYRP14679 529 aa20.22■□□□□ 0.83
CAPN1-211ENST00000527739 GBP1P32455 592 aa20.22■□□□□ 0.83
CAPN1-211ENST00000527739 CRY1Q16526 586 aa20.22■□□□□ 0.83
CAPN1-211ENST00000527739 EOGTQ5NDL2 527 aa20.22■□□□□ 0.83
CAPN1-211ENST00000527739 TRIM59Q8IWR1 403 aa20.22■□□□□ 0.83
CAPN1-211ENST00000527739 ETFBKMTQ8IXQ9 262 aa20.22■□□□□ 0.83
CAPN1-211ENST00000527739 SIX6OS1Q8N1H7 587 aa20.22■□□□□ 0.83
CAPN1-211ENST00000527739 UBR7Q8N806 425 aa20.22■□□□□ 0.83
CAPN1-211ENST00000527739 IL17RCQ8NAC3 791 aa20.22■□□□□ 0.83
CAPN1-211ENST00000527739 ARRDC1-AS1Q9H2J1 176 aa20.22■□□□□ 0.83
CAPN1-211ENST00000527739 PLK2Q9NYY3 685 aa20.22■□□□□ 0.83
CAPN1-211ENST00000527739 MARCH2Q9P0N8 246 aa20.22■□□□□ 0.83
CAPN1-211ENST00000527739 A0A0A0MRY4 1105 aa20.21■□□□□ 0.83
CAPN1-211ENST00000527739 SGK1O00141 431 aa20.21■□□□□ 0.83
CAPN1-211ENST00000527739 O00370 1275 aa20.21■□□□□ 0.83
CAPN1-211ENST00000527739 ALDH1A2O94788 518 aa20.21■□□□□ 0.83
CAPN1-211ENST00000527739 CALCAP01258 141 aa20.21■□□□□ 0.83
CAPN1-211ENST00000527739 PAEPP09466 180 aa20.21■□□□□ 0.83
CAPN1-211ENST00000527739 RGS7P49802 495 aa20.21■□□□□ 0.83
CAPN1-211ENST00000527739 ADIGQ0VDE8 80 aa20.21■□□□□ 0.83
CAPN1-211ENST00000527739 CCDC6Q16204 474 aa20.21■□□□□ 0.83
CAPN1-211ENST00000527739 USP39Q53GS9 565 aaKnown RBP20.21■□□□□ 0.83
CAPN1-211ENST00000527739 FOXR2Q6PJQ5 311 aa20.21■□□□□ 0.83
CAPN1-211ENST00000527739 PRR23CQ6ZRP0 262 aa20.21■□□□□ 0.83
CAPN1-211ENST00000527739 ARHGEF19Q8IW93 802 aa20.21■□□□□ 0.83
CAPN1-211ENST00000527739 PGBD3Q8N328 593 aa20.21■□□□□ 0.83
CAPN1-211ENST00000527739 RBBP8NLQ8NC74 664 aaPredicted RBP20.21■□□□□ 0.83
CAPN1-211ENST00000527739 LMO3Q8TAP4 145 aa20.21■□□□□ 0.83
CAPN1-211ENST00000527739 RNF139Q8WU17 664 aa20.21■□□□□ 0.83
CAPN1-211ENST00000527739 TFAP2BQ92481 460 aa20.21■□□□□ 0.83
CAPN1-211ENST00000527739 POLMQ9NP87 494 aaPredicted RBP20.21■□□□□ 0.83
CAPN1-211ENST00000527739 BCCIPQ9P287 314 aaKnown RBP eCLIP20.21■□□□□ 0.83
CAPN1-211ENST00000527739 EBF1Q9UH73 591 aa20.21■□□□□ 0.83
CAPN1-211ENST00000527739 ZNF510Q9Y2H8 683 aa20.21■□□□□ 0.83
CAPN1-211ENST00000527739 HELZP42694 1942 aaKnown RBP20.21■□□□□ 0.83
CAPN1-211ENST00000527739 EPG5Q9HCE0 2579 aa20.2■□□□□ 0.82
CAPN1-211ENST00000527739 RNF225M0QZC1 329 aaPredicted RBP20.2■□□□□ 0.82
CAPN1-211ENST00000527739 PIK3R2O00459 728 aa20.2■□□□□ 0.82
CAPN1-211ENST00000527739 SLC30A4O14863 429 aa20.2■□□□□ 0.82
CAPN1-211ENST00000527739 LRP3O75074 770 aa20.2■□□□□ 0.82
CAPN1-211ENST00000527739 SETSIPP0DME0 302 aa20.2■□□□□ 0.82
CAPN1-211ENST00000527739 BRD2P25440 801 aaKnown RBP20.2■□□□□ 0.82
CAPN1-211ENST00000527739 CORO1AP31146 461 aaKnown RBP20.2■□□□□ 0.82
CAPN1-211ENST00000527739 KIR2DL1P43626 348 aaPredicted RBP20.2■□□□□ 0.82
CAPN1-211ENST00000527739 ELF2Q15723 593 aa20.2■□□□□ 0.82
CAPN1-211ENST00000527739 LCLAT1Q6UWP7 414 aa20.2■□□□□ 0.82
CAPN1-211ENST00000527739 TMEM92Q6UXU6 159 aa20.2■□□□□ 0.82
CAPN1-211ENST00000527739 PHTF2Q8N3S3 785 aa20.2■□□□□ 0.82
CAPN1-211ENST00000527739 ZNF276Q8N554 614 aa20.2■□□□□ 0.82
CAPN1-211ENST00000527739 ZNF513Q8N8E2 541 aaPredicted RBP20.2■□□□□ 0.82
CAPN1-211ENST00000527739 NETO1Q8TDF5 533 aa20.2■□□□□ 0.82
CAPN1-211ENST00000527739 EDEM1Q92611 657 aa20.2■□□□□ 0.82
CAPN1-211ENST00000527739 DCLK3Q9C098 648 aa20.2■□□□□ 0.82
CAPN1-211ENST00000527739 INTS2Q9H0H0 1204 aaKnown RBP20.2■□□□□ 0.82
CAPN1-211ENST00000527739 RWDD2AQ9UIY3 292 aa20.2■□□□□ 0.82
CAPN1-211ENST00000527739 MYH10P35580 1976 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms