RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 APOC4-APOC2K7ER74 178 aa15.58■□□□□ 0.08
USP47-207ENST00000527733 ATG7O95352 703 aa15.58■□□□□ 0.08
USP47-207ENST00000527733 APOC2P02655 101 aa15.58■□□□□ 0.08
USP47-207ENST00000527733 KDELR1P24390 212 aa15.58■□□□□ 0.08
USP47-207ENST00000527733 BEND6Q5SZJ8 279 aaPredicted RBP15.58■□□□□ 0.08
USP47-207ENST00000527733 LRRC6Q86X45 466 aa15.58■□□□□ 0.08
USP47-207ENST00000527733 THOC1Q96FV9 657 aaKnown RBP15.58■□□□□ 0.08
USP47-207ENST00000527733 OR6C75A6NL08 312 aa15.57■□□□□ 0.08
USP47-207ENST00000527733 RAMP2O60895 175 aa15.57■□□□□ 0.08
USP47-207ENST00000527733 DCTN3O75935 186 aa15.57■□□□□ 0.08
USP47-207ENST00000527733 LIG3P49916 1009 aa15.57■□□□□ 0.08
USP47-207ENST00000527733 LCLAT1Q6UWP7 414 aa15.57■□□□□ 0.08
USP47-207ENST00000527733 FAM35AQ86V20 835 aa15.57■□□□□ 0.08
USP47-207ENST00000527733 CELF6Q96J87 481 aaKnown RBP15.57■□□□□ 0.08
USP47-207ENST00000527733 EGFL8Q99944 293 aa15.57■□□□□ 0.08
USP47-207ENST00000527733 DUSP16Q9BY84 665 aa15.57■□□□□ 0.08
USP47-207ENST00000527733 FAM124BQ9H5Z6 455 aaPredicted RBP15.57■□□□□ 0.08
USP47-207ENST00000527733 TRMT13Q9NUP7 481 aaKnown RBP15.57■□□□□ 0.08
USP47-207ENST00000527733 GTSE1Q9NYZ3 720 aa15.57■□□□□ 0.08
USP47-207ENST00000527733 GTF2IRD1Q9UHL9 959 aa15.57■□□□□ 0.08
USP47-207ENST00000527733 COQ4Q9Y3A0 265 aa15.57■□□□□ 0.08
USP47-207ENST00000527733 MMP8P22894 467 aa15.57■□□□□ 0.08
USP47-207ENST00000527733 CYP2C18P33260 490 aa15.57■□□□□ 0.08
USP47-207ENST00000527733 SLC12A1Q13621 1099 aa15.57■□□□□ 0.08
USP47-207ENST00000527733 TERF2Q15554 542 aa15.57■□□□□ 0.08
USP47-207ENST00000527733 GBP7Q8N8V2 638 aaPredicted RBP15.57■□□□□ 0.08
USP47-207ENST00000527733 SNX27Q96L92 541 aa15.57■□□□□ 0.08
USP47-207ENST00000527733 UBXN6Q9BZV1 441 aa15.57■□□□□ 0.08
USP47-207ENST00000527733 TXLNGQ9NUQ3 528 aa15.57■□□□□ 0.08
USP47-207ENST00000527733 NUDT5Q9UKK9 219 aa15.57■□□□□ 0.08
USP47-207ENST00000527733 APOBEC2Q9Y235 224 aaKnown RBP15.57■□□□□ 0.08
USP47-207ENST00000527733 ANKRD36CQ5JPF3 1778 aa15.57■□□□□ 0.08
USP47-207ENST00000527733 RBAK-RBAKDNI3L0D1 243 aa15.57■□□□□ 0.08
USP47-207ENST00000527733 XYLBO75191 536 aa15.57■□□□□ 0.08
USP47-207ENST00000527733 APLP1P51693 650 aa15.57■□□□□ 0.08
USP47-207ENST00000527733 RPL7AP62424 266 aaKnown RBP15.57■□□□□ 0.08
USP47-207ENST00000527733 RBBP5Q15291 538 aaKnown RBP15.57■□□□□ 0.08
USP47-207ENST00000527733 PPM1LQ5SGD2 360 aa15.57■□□□□ 0.08
USP47-207ENST00000527733 PALB2Q86YC2 1186 aa15.57■□□□□ 0.08
USP47-207ENST00000527733 C4orf33Q8N1A6 199 aa15.57■□□□□ 0.08
USP47-207ENST00000527733 CHMP6Q96FZ7 201 aa15.57■□□□□ 0.08
USP47-207ENST00000527733 PRDM16Q9HAZ2 1276 aa15.57■□□□□ 0.08
USP47-207ENST00000527733 CNGB3Q9NQW8 809 aa15.57■□□□□ 0.08
USP47-207ENST00000527733 RBM22Q9NW64 420 aaKnown RBP eCLIP15.57■□□□□ 0.08
USP47-207ENST00000527733 ADAMTS5Q9UNA0 930 aa15.57■□□□□ 0.08
USP47-207ENST00000527733 REXO2Q9Y3B8 237 aaKnown RBP15.57■□□□□ 0.08
USP47-207ENST00000527733 TTLL13PA6NNM8 815 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 XPO1O14980 1071 aaKnown RBP15.56■□□□□ 0.08
USP47-207ENST00000527733 STX7O15400 261 aaKnown RBP15.56■□□□□ 0.08
USP47-207ENST00000527733 DNAJC6O75061 913 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 F2P00734 622 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 MARC1Q5VT66 337 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 ULK4Q96C45 1275 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 SGSM3Q96HU1 749 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 PCDHB18PQ96TA0 734 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 HTATIP2Q9BUP3 242 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 PPARGC1AQ9UBK2 798 aaKnown RBP15.56■□□□□ 0.08
USP47-207ENST00000527733 SHOC2Q9UQ13 582 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 EDNRBP24530 442 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 ATP5C1P36542 298 aaKnown RBP15.56■□□□□ 0.08
USP47-207ENST00000527733 PSEN1P49768 467 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 OCRLQ01968 901 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 VCXQ9H320 206 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 CCDC195A0A1B0GUA6 201 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 IGF2BP3O00425 579 aaKnown RBP eCLIP15.56■□□□□ 0.08
USP47-207ENST00000527733 SMIM24O75264 130 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 GEMIN4P57678 1058 aaKnown RBP15.56■□□□□ 0.08
USP47-207ENST00000527733 PTK6Q13882 451 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 PSMD5Q16401 504 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 CCDC149Q6ZUS6 474 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 TFAP2DQ7Z6R9 452 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 TMEM139Q8IV31 216 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 COLGALT1Q8NBJ5 622 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 FBXO36Q8NEA4 188 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 ZSWIM2Q8NEG5 633 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 UCMAQ8WVF2 138 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 TTYH3Q9C0H2 523 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 CACYBPQ9HB71 228 aaKnown RBP15.56■□□□□ 0.08
USP47-207ENST00000527733 L1RE1Q9UN81 338 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 PKP3Q9Y446 797 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 TLL2Q9Y6L7 1015 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 MYH1P12882 1939 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 ADAMTS7Q9UKP4 1686 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 FAM47DPA6NHR8 397 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 O00370 1275 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 ESRRAP11474 423 aaPredicted RBP15.56■□□□□ 0.08
USP47-207ENST00000527733 MAP2K2P36507 400 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 FAM133BQ5BKY9 247 aaKnown RBP15.56■□□□□ 0.08
USP47-207ENST00000527733 PDZD8Q8NEN9 1154 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 HTR3CQ8WXA8 447 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 SERPINB12Q96P63 405 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 LRRC40Q9H9A6 602 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.56■□□□□ 0.08
USP47-207ENST00000527733 ADGRA3Q8IWK6 1321 aa15.56■□□□□ 0.08
USP47-207ENST00000527733 SIPA1L3O60292 1781 aaPredicted RBP15.55■□□□□ 0.08
USP47-207ENST00000527733 NT5C1B-RDH14C9J2C7 533 aa15.55■□□□□ 0.08
USP47-207ENST00000527733 CLDN5O00501 218 aa15.55■□□□□ 0.08
USP47-207ENST00000527733 PMM2O15305 246 aa15.55■□□□□ 0.08
USP47-207ENST00000527733 PPP1R37O75864 691 aa15.55■□□□□ 0.08
USP47-207ENST00000527733 CSH1P0DML2 217 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms