RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 CRYBB1P53674 252 aaPredicted RBP15.93■□□□□ 0.14
USH1C-207ENST00000527720 NCALDP61601 193 aa15.93■□□□□ 0.14
USH1C-207ENST00000527720 YWHAGP61981 247 aaKnown RBP eCLIP15.93■□□□□ 0.14
USH1C-207ENST00000527720 YWHAZP63104 245 aaKnown RBP15.93■□□□□ 0.14
USH1C-207ENST00000527720 SNCBQ16143 134 aa15.93■□□□□ 0.14
USH1C-207ENST00000527720 TOP6BLQ8N6T0 577 aa15.93■□□□□ 0.14
USH1C-207ENST00000527720 MAGEC3Q8TD91 643 aa15.93■□□□□ 0.14
USH1C-207ENST00000527720 APBB2Q92870 758 aa15.93■□□□□ 0.14
USH1C-207ENST00000527720 APOL6Q9BWW8 343 aa15.93■□□□□ 0.14
USH1C-207ENST00000527720 VPS11Q9H270 941 aa15.93■□□□□ 0.14
USH1C-207ENST00000527720 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.93■□□□□ 0.14
USH1C-207ENST00000527720 Q9Y3F1 56 aa15.93■□□□□ 0.14
USH1C-207ENST00000527720 SRCAPQ6ZRS2 3230 aa15.93■□□□□ 0.14
USH1C-207ENST00000527720 HUS1O60921 280 aa15.93■□□□□ 0.14
USH1C-207ENST00000527720 MT-ND3P03897 115 aa15.93■□□□□ 0.14
USH1C-207ENST00000527720 PDGFRBP09619 1106 aa15.93■□□□□ 0.14
USH1C-207ENST00000527720 TPSB2P20231 275 aa15.93■□□□□ 0.14
USH1C-207ENST00000527720 WARSP23381 471 aaKnown RBP15.93■□□□□ 0.14
USH1C-207ENST00000527720 ELF3P78545 371 aaPredicted RBP15.93■□□□□ 0.14
USH1C-207ENST00000527720 PTK7Q13308 1070 aa15.93■□□□□ 0.14
USH1C-207ENST00000527720 TPSAB1Q15661 275 aa15.93■□□□□ 0.14
USH1C-207ENST00000527720 UBXN11Q5T124 520 aa15.93■□□□□ 0.14
USH1C-207ENST00000527720 BZW1Q7L1Q6 419 aaKnown RBP15.93■□□□□ 0.14
USH1C-207ENST00000527720 ECHDC2Q86YB7 292 aa15.93■□□□□ 0.14
USH1C-207ENST00000527720 C2orf69Q8N8R5 385 aa15.93■□□□□ 0.14
USH1C-207ENST00000527720 TMEM40Q8WWA1 233 aa15.93■□□□□ 0.14
USH1C-207ENST00000527720 ZNF75CPQ92670 426 aaPredicted RBP15.93■□□□□ 0.14
USH1C-207ENST00000527720 RMDN2Q96LZ7 410 aa15.93■□□□□ 0.14
USH1C-207ENST00000527720 KATNAL1Q9BW62 490 aa15.93■□□□□ 0.14
USH1C-207ENST00000527720 DHX35Q9H5Z1 703 aaKnown RBP15.93■□□□□ 0.14
USH1C-207ENST00000527720 ECT2Q9H8V3 914 aa15.93■□□□□ 0.14
USH1C-207ENST00000527720 ZNF180Q9UJW8 692 aa15.93■□□□□ 0.14
USH1C-207ENST00000527720 CHUKO15111 745 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 SPTLC1O15269 473 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 ZNF865P0CJ78 1059 aaPredicted RBP15.92■□□□□ 0.14
USH1C-207ENST00000527720 LCP1P13796 627 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 LMO2P25791 158 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 MNAT1P51948 309 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 SLC8A3P57103 927 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 SLC18A2Q05940 514 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 MGAT5Q09328 741 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 KBTBD12Q3ZCT8 623 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 VPS52Q8N1B4 723 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 ZNF398Q8TD17 642 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 TCP10LQ8TDR4 215 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 CLEC4CQ8WTT0 213 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 QKIQ96PU8 341 aaKnown RBP eCLIP15.92■□□□□ 0.14
USH1C-207ENST00000527720 HNRNPABQ99729 332 aaKnown RBP15.92■□□□□ 0.14
USH1C-207ENST00000527720 MTMR10Q9NXD2 777 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 TSC2P49815 1807 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 HACD1B0YJ81 288 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 DCTN3O75935 186 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 ATP5HO75947 161 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 TFE3P19532 575 aaPredicted RBP15.92■□□□□ 0.14
USH1C-207ENST00000527720 LRPAP1P30533 357 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 ALDH3A1P30838 453 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 MATKP42679 507 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 RIPK1Q13546 671 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 HIC1Q14526 733 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 SETDB1Q15047 1291 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 PRAMEF19Q5SWL8 479 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 SWT1Q5T5J6 900 aaKnown RBP15.92■□□□□ 0.14
USH1C-207ENST00000527720 OLFML2BQ68BL8 750 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 CAND1Q86VP6 1230 aaKnown RBP15.92■□□□□ 0.14
USH1C-207ENST00000527720 SLC26A11Q86WA9 606 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 ADGRF2Q8IZF7 708 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 SLC2A14Q8TDB8 520 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 LPIN3Q9BQK8 851 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 ETNK1Q9HBU6 452 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 POPDC2Q9HBU9 364 aa15.92■□□□□ 0.14
USH1C-207ENST00000527720 ZNF638Q14966 1978 aaKnown RBP15.91■□□□□ 0.14
USH1C-207ENST00000527720 TREHO43280 583 aa15.91■□□□□ 0.14
USH1C-207ENST00000527720 GNAT1P11488 350 aa15.91■□□□□ 0.14
USH1C-207ENST00000527720 CCNB1P14635 433 aa15.91■□□□□ 0.14
USH1C-207ENST00000527720 NQO1P15559 274 aaKnown RBP15.91■□□□□ 0.14
USH1C-207ENST00000527720 PRKCHP24723 683 aa15.91■□□□□ 0.14
USH1C-207ENST00000527720 MAGEA3P43357 314 aa15.91■□□□□ 0.14
USH1C-207ENST00000527720 SLC25A52Q3SY17 297 aa15.91■□□□□ 0.14
USH1C-207ENST00000527720 SPDYAQ5MJ70 313 aa15.91■□□□□ 0.14
USH1C-207ENST00000527720 TTC39BQ5VTQ0 682 aaPredicted RBP15.91■□□□□ 0.14
USH1C-207ENST00000527720 APOPT1Q96IL0 206 aa15.91■□□□□ 0.14
USH1C-207ENST00000527720 CSPG4P5Q96PW8 444 aa15.91■□□□□ 0.14
USH1C-207ENST00000527720 TRPM7Q96QT4 1865 aa15.91■□□□□ 0.14
USH1C-207ENST00000527720 KCTD15Q96SI1 283 aaPredicted RBP15.91■□□□□ 0.14
USH1C-207ENST00000527720 KLK14Q9P0G3 267 aa15.91■□□□□ 0.14
USH1C-207ENST00000527720 ZC3H7BQ9UGR2 993 aaKnown RBP15.91■□□□□ 0.14
USH1C-207ENST00000527720 GGT7Q9UJ14 662 aa15.91■□□□□ 0.14
USH1C-207ENST00000527720 TTLL3Q9Y4R7 772 aa15.91■□□□□ 0.14
USH1C-207ENST00000527720 IPPQ9Y573 584 aa15.91■□□□□ 0.14
USH1C-207ENST00000527720 HCRTO43612 131 aa15.91■□□□□ 0.14
USH1C-207ENST00000527720 DAB1O75553 588 aa15.91■□□□□ 0.14
USH1C-207ENST00000527720 C1QAP02745 245 aa15.91■□□□□ 0.14
USH1C-207ENST00000527720 APRTP07741 180 aa15.91■□□□□ 0.14
USH1C-207ENST00000527720 ARL4AP40617 200 aa15.91■□□□□ 0.14
USH1C-207ENST00000527720 LILRA4P59901 499 aa15.91■□□□□ 0.14
USH1C-207ENST00000527720 LGSNQ5TDP6 509 aa15.91■□□□□ 0.14
USH1C-207ENST00000527720 FYB2Q5VWT5 728 aa15.91■□□□□ 0.14
USH1C-207ENST00000527720 LRRC6Q86X45 466 aa15.91■□□□□ 0.14
USH1C-207ENST00000527720 CHSY1Q86X52 802 aa15.91■□□□□ 0.14
USH1C-207ENST00000527720 HACE1Q8IYU2 909 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms