RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 ING3Q9NXR8 418 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 EURLQ9NYK6 297 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 IL1RAPL1Q9NZN1 696 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 PDP2Q9P2J9 529 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 RNF7Q9UBF6 113 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 NDOR1Q9UHB4 597 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 TBK1Q9UHD2 729 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 BAIAP2L1Q9UHR4 511 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 SAP30BPQ9UHR5 308 aaKnown RBP3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 PFDN2Q9UHV9 154 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 KIAA1257Q9ULG3 409 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 SCAF8Q9UPN6 1271 aaKnown RBP3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 CNPY2Q9Y2B0 182 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 SNX9Q9Y5X1 595 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 NUMBLQ9Y6R0 609 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 WDR62O43379 1518 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 BCL9O00512 1426 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 NUP160Q12769 1436 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 UHRF1BP1Q6BDS2 1440 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 WIZO95785 1651 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 MYOM2P54296 1465 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 SNAPC4Q5SXM2 1469 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 PRXQ9BXM0 1461 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 ARPC4-TTLL3A0A0A6YYG9 625 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 A0A0A6YYJ9 748 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 IQANK1A0A1B0GTG1 560 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 C5orf60A6NFR6 353 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 C2orf81A6NN90 581 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 GOLGA8TH3BQL2 631 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 LEFTY2O00292 366 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 PPIP5K2O43314 1243 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 RBMXL2O75526 392 aaKnown RBP3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 SERPINB7O75635 380 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 ESRRBO95718 433 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 FAM107AO95990 144 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 APOEP02649 317 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 ASLP04424 464 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 S100A6P06703 90 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 GOLGA8HP0CJ92 632 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 GAAP10253 952 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 RBP3P10745 1247 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 CYP2C9P11712 490 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 ACADSP16219 412 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 SFPQP23246 707 aaKnown RBP eCLIP3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 RRM1P23921 792 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 HOXC13P31276 330 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 CSTF2P33240 577 aaKnown RBP eCLIP3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 MXI1P50539 228 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 MECP2P51608 486 aaKnown RBP3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 THOP1P52888 689 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 WNT3AP56704 352 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 UBXN2AP68543 259 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 BLOC1S1P78537 153 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 MAPK7Q13164 816 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 MRPL49Q13405 166 aaKnown RBP3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 MVPQ14764 893 aaKnown RBP3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 NONOQ15233 471 aaKnown RBP eCLIP3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 MAPRE1Q15691 268 aaKnown RBP3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 NFE2L2Q16236 605 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 IMMTQ16891 758 aaKnown RBP3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 ANKDD1AQ495B1 522 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 MTERF2Q49AM1 385 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 ANO6Q4KMQ2 910 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 WDR45BQ5MNZ6 344 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 ANKRD20A2Q5SQ80 823 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 SYCP2LQ5T4T6 812 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 ANKRD20A1Q5TYW2 823 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 MEX3CQ5U5Q3 659 aaKnown RBP3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 ANKRD20A3Q5VUR7 823 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 SIGIRRQ6IA17 410 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 PPP4R3AQ6IN85 833 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 DUS1LQ6P1R4 473 aaKnown RBP3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 KDM7AQ6ZMT4 941 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 GPRIN1Q7Z2K8 1008 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 KANSL1Q7Z3B3 1105 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 UBE3BQ7Z3V4 1068 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 VPS36Q86VN1 386 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 RHOT2Q8IXI1 618 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 CKAP2LQ8IYA6 745 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 TRIML2Q8N7C3 387 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 CPEB3Q8NE35 698 aaKnown RBP3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 TOR1AIP2Q8NFQ8 470 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 CAGE1Q8TC20 777 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 AGAP11Q8TF27 550 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 ATP8B4Q8TF62 1192 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 SLC9A6Q92581 669 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 RUBCNQ92622 972 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 HAUS1Q96CS2 278 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 GIMAP5Q96F15 307 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 MED30Q96HR3 178 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 RPS6KC1Q96S38 1066 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 PNKPQ96T60 521 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 NAP1L4Q99733 375 aaKnown RBP3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 SYT15Q9BQS2 421 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 SIKE1Q9BRV8 207 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 SOX7Q9BT81 388 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 KLHL4Q9C0H6 718 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 B3GNT4Q9C0J1 378 aa3.93□□□□□ -1.78
CLNS1A-209ENST00000527299 EPC1Q9H2F5 836 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms