RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 RPA1P27694 616 aa11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 VAMP7P51809 220 aa11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 OTUD4Q01804 1114 aaKnown RBP11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 KCTD1Q719H9 257 aa11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 SAMD7Q7Z3H4 446 aa11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 PTAR1Q7Z6K3 402 aaPredicted RBP11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 CYP2W1Q8TAV3 490 aa11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 NLRP7Q8WX94 980 aa11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 ATP6V0A1Q93050 837 aa11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 JMJD4Q9H9V9 463 aa11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 PARVGQ9HBI0 331 aa11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 PLK2Q9NYY3 685 aa11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 FAM198AQ9UFP1 575 aa11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 PSMD13Q9UNM6 376 aa11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 APOBEC2Q9Y235 224 aaKnown RBP11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 DYTNA2CJ06 578 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 SDR42E2A6NKP2 422 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 EIF3FO00303 357 aaPredicted RBP11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 AIM2O14862 343 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 DCXO43602 365 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 UGT1A9O60656 530 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 SIN3BO75182 1162 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 AKR1B1P15121 316 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 UGT1A6P19224 532 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 AOC1P19801 751 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 UGT1A1P22309 533 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 UGT1A4P22310 534 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 UGT1A3P35503 534 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 UGT1A5P35504 534 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 PPARGP37231 505 aaPredicted RBP11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 STAT2P52630 851 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 PEX3P56589 373 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 STX3Q13277 289 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 KRT80Q6KB66 452 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 PGM2L1Q6PCE3 622 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 BORAQ6PGQ7 559 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 MFSD7Q6UXD7 560 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 SH3BP5LQ7L8J4 393 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 RHOT1Q8IXI2 618 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 PHTF2Q8N3S3 785 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 LZTR1Q8N653 840 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 ALLCQ8N6M5 410 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 C11orf70Q9BRQ4 267 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 CBWD1Q9BRT8 395 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 HAUS8Q9BT25 410 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 UGT1A7Q9HAW7 530 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 UGT1A10Q9HAW8 530 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 UGT1A8Q9HAW9 530 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 AFG3L2Q9Y4W6 797 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 AVILO75366 819 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 GDF10P55107 478 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 PRAMEP78395 509 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 BASP1P80723 227 aaKnown RBP11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 ITGADQ13349 1161 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 PRAMEF18Q5VWM3 479 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 MIER3Q7Z3K6 550 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 LILRA2Q8N149 483 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 C12orf43Q96C57 262 aaKnown RBP11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 C7orf26Q96N11 449 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 ARPC5LQ9BPX5 153 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 C17orf75Q9HAS0 396 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 MAN1C1Q9NR34 630 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 HOMER2Q9NSB8 354 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 TUBA8Q9NY65 449 aaPredicted RBP11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 ZNHIT2Q9UHR6 403 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 DNAJC16Q9Y2G8 782 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 TCRBV9S1A1TA0A576 114 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 CSPG5O95196 566 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 ZNF23P17027 643 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 MXI1P50539 228 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 PKNOX1P55347 436 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 SNAP25P60880 206 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 SPIRE1Q08AE8 756 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 BNIP3Q12983 259 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 SNRNP48Q6IEG0 339 aaKnown RBP11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 HHIPL2Q6UWX4 724 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 DLK2Q6UY11 383 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 ZNF720Q7Z2F6 126 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 CCDC33Q8N5R6 958 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 TFB1MQ8WVM0 346 aaKnown RBP11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 SEMA4DQ92854 862 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 USP13Q92995 863 aaPredicted RBP11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 CFAP36Q96G28 342 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 ZDHHC15Q96MV8 337 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 RANBP9Q96S59 729 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 PKP2Q99959 881 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 SYT17Q9BSW7 474 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 PI4K2AQ9BTU6 479 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 EPS15L1Q9UBC2 864 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 SPO11Q9Y5K1 396 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 NOX1Q9Y5S8 564 aa11.64□□□□□ -0.55
CLNS1A-204ENST00000525428 MYPNQ86TC9 1320 aa11.63□□□□□ -0.55
CLNS1A-204ENST00000525428 DLEC1Q9Y238 1755 aa11.63□□□□□ -0.55
CLNS1A-204ENST00000525428 A0A1W2PPW3 197 aa11.63□□□□□ -0.55
CLNS1A-204ENST00000525428 GIPC1O14908 333 aa11.63□□□□□ -0.55
CLNS1A-204ENST00000525428 MCF2LO15068 1137 aa11.63□□□□□ -0.55
CLNS1A-204ENST00000525428 DGKIO75912 1065 aa11.63□□□□□ -0.55
CLNS1A-204ENST00000525428 KRT1P04264 644 aa11.63□□□□□ -0.55
CLNS1A-204ENST00000525428 TAL1P17542 331 aaPredicted RBP11.63□□□□□ -0.55
CLNS1A-204ENST00000525428 PTPN1P18031 435 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms