RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 GOLGA6L3A6NEY3 463 aa5.09□□□□□ -1.59
CD44-215ENST00000525241 H7C1Q1 480 aa5.09□□□□□ -1.59
CD44-215ENST00000525241 CA12O43570 354 aa5.09□□□□□ -1.59
CD44-215ENST00000525241 NTSR2O95665 410 aa5.09□□□□□ -1.59
CD44-215ENST00000525241 VIPP01282 170 aa5.09□□□□□ -1.59
CD44-215ENST00000525241 SRGAP2BP0DMP2 458 aa5.09□□□□□ -1.59
CD44-215ENST00000525241 APEHP13798 732 aaKnown RBP5.09□□□□□ -1.59
CD44-215ENST00000525241 RENBPP51606 427 aa5.09□□□□□ -1.59
CD44-215ENST00000525241 COPB1P53618 953 aaKnown RBP5.09□□□□□ -1.59
CD44-215ENST00000525241 NANOS3P60323 173 aaKnown RBP5.09□□□□□ -1.59
CD44-215ENST00000525241 OS9Q13438 667 aaPredicted RBP5.09□□□□□ -1.59
CD44-215ENST00000525241 FAM90A2PQ658T7 463 aa5.09□□□□□ -1.59
CD44-215ENST00000525241 DENND2CQ68D51 928 aa5.09□□□□□ -1.59
CD44-215ENST00000525241 FCRLBQ6BAA4 426 aa5.09□□□□□ -1.59
CD44-215ENST00000525241 TLDC1Q6P9B6 456 aa5.09□□□□□ -1.59
CD44-215ENST00000525241 ZNF788Q6ZQV5 615 aa5.09□□□□□ -1.59
CD44-215ENST00000525241 DNAJC10Q8IXB1 793 aa5.09□□□□□ -1.59
CD44-215ENST00000525241 ZNF527Q8NB42 609 aa5.09□□□□□ -1.59
CD44-215ENST00000525241 VPS37AQ8NEZ2 397 aa5.09□□□□□ -1.59
CD44-215ENST00000525241 NTN5Q8WTR8 489 aaPredicted RBP5.09□□□□□ -1.59
CD44-215ENST00000525241 POF1BQ8WVV4 589 aa5.09□□□□□ -1.59
CD44-215ENST00000525241 NELL1Q92832 810 aa5.09□□□□□ -1.59
CD44-215ENST00000525241 EDC3Q96F86 508 aaKnown RBP5.09□□□□□ -1.59
CD44-215ENST00000525241 PRR11Q96HE9 360 aaPredicted RBP5.09□□□□□ -1.59
CD44-215ENST00000525241 NUDT22Q9BRQ3 303 aa5.09□□□□□ -1.59
CD44-215ENST00000525241 AQP12BA6NM10 295 aa5.08□□□□□ -1.6
CD44-215ENST00000525241 F5H423 210 aaPredicted RBP5.08□□□□□ -1.6
CD44-215ENST00000525241 PCDH17O14917 1159 aa5.08□□□□□ -1.6
CD44-215ENST00000525241 GLP2RO95838 553 aa5.08□□□□□ -1.6
CD44-215ENST00000525241 MT-CO3P00414 261 aa5.08□□□□□ -1.6
CD44-215ENST00000525241 ATF7P17544 494 aaPredicted RBP5.08□□□□□ -1.6
CD44-215ENST00000525241 DGKQP52824 942 aa5.08□□□□□ -1.6
CD44-215ENST00000525241 GPC5P78333 572 aa5.08□□□□□ -1.6
CD44-215ENST00000525241 CHAF1AQ13111 956 aaPredicted RBP5.08□□□□□ -1.6
CD44-215ENST00000525241 GRM1Q13255 1194 aa5.08□□□□□ -1.6
CD44-215ENST00000525241 DNASE1L3Q13609 305 aa5.08□□□□□ -1.6
CD44-215ENST00000525241 PROSER3Q2NL68 480 aa5.08□□□□□ -1.6
CD44-215ENST00000525241 TMEM196Q5HYL7 178 aa5.08□□□□□ -1.6
CD44-215ENST00000525241 SUMO4Q6EEV6 95 aa5.08□□□□□ -1.6
CD44-215ENST00000525241 PGBD2Q6P3X8 592 aa5.08□□□□□ -1.6
CD44-215ENST00000525241 GGT6Q6P531 493 aa5.08□□□□□ -1.6
CD44-215ENST00000525241 RASGRP3Q8IV61 690 aa5.08□□□□□ -1.6
CD44-215ENST00000525241 C12orf76Q8N812 135 aaPredicted RBP5.08□□□□□ -1.6
CD44-215ENST00000525241 NGDNQ8NEJ9 315 aaKnown RBP5.08□□□□□ -1.6
CD44-215ENST00000525241 KAZALD1Q96I82 304 aa5.08□□□□□ -1.6
CD44-215ENST00000525241 SAP30LQ9HAJ7 183 aa5.08□□□□□ -1.6
CD44-215ENST00000525241 OBP2BQ9NPH6 170 aa5.08□□□□□ -1.6
CD44-215ENST00000525241 FSCN3Q9NQT6 498 aa5.08□□□□□ -1.6
CD44-215ENST00000525241 VPS45Q9NRW7 570 aa5.08□□□□□ -1.6
CD44-215ENST00000525241 HELLSQ9NRZ9 838 aa5.08□□□□□ -1.6
CD44-215ENST00000525241 RXFP3Q9NSD7 469 aa5.08□□□□□ -1.6
CD44-215ENST00000525241 GAR1Q9NY12 217 aaKnown RBP5.08□□□□□ -1.6
CD44-215ENST00000525241 TFCP2L1Q9NZI6 479 aa5.08□□□□□ -1.6
CD44-215ENST00000525241 MAGED2Q9UNF1 606 aaPredicted RBP5.08□□□□□ -1.6
CD44-215ENST00000525241 COMMD10Q9Y6G5 202 aa5.08□□□□□ -1.6
CD44-215ENST00000525241 TISP43B9A030 160 aa5.07□□□□□ -1.6
CD44-215ENST00000525241 J3KTA2 159 aa5.07□□□□□ -1.6
CD44-215ENST00000525241 SMIM22K7EJ46 135 aa5.07□□□□□ -1.6
CD44-215ENST00000525241 NPC1O15118 1278 aa5.07□□□□□ -1.6
CD44-215ENST00000525241 PRAMEF2O60811 474 aa5.07□□□□□ -1.6
CD44-215ENST00000525241 LDHAP00338 332 aaKnown RBP5.07□□□□□ -1.6
CD44-215ENST00000525241 MBPP02686 304 aaPredicted RBP5.07□□□□□ -1.6
CD44-215ENST00000525241 NPPBP16860 134 aa5.07□□□□□ -1.6
CD44-215ENST00000525241 DRD1P21728 446 aa5.07□□□□□ -1.6
CD44-215ENST00000525241 PDIA3P30101 505 aaKnown RBP5.07□□□□□ -1.6
CD44-215ENST00000525241 CFHR3Q02985 330 aa5.07□□□□□ -1.6
CD44-215ENST00000525241 GALNT1Q10472 559 aaPredicted RBP5.07□□□□□ -1.6
CD44-215ENST00000525241 SPARCL1Q14515 664 aa5.07□□□□□ -1.6
CD44-215ENST00000525241 PUM3Q15397 648 aaKnown RBP5.07□□□□□ -1.6
CD44-215ENST00000525241 PFKFB4Q16877 469 aa5.07□□□□□ -1.6
CD44-215ENST00000525241 C10orf62Q5T681 223 aaPredicted RBP5.07□□□□□ -1.6
CD44-215ENST00000525241 PIK3AP1Q6ZUJ8 805 aa5.07□□□□□ -1.6
CD44-215ENST00000525241 CHSY1Q86X52 802 aa5.07□□□□□ -1.6
CD44-215ENST00000525241 P3H2Q8IVL5 708 aa5.07□□□□□ -1.6
CD44-215ENST00000525241 CLASRPQ8N2M8 674 aaKnown RBP5.07□□□□□ -1.6
CD44-215ENST00000525241 SEMA6DQ8NFY4 1073 aa5.07□□□□□ -1.6
CD44-215ENST00000525241 MAFAQ8NHW3 353 aaPredicted RBP5.07□□□□□ -1.6
CD44-215ENST00000525241 STYXQ8WUJ0 223 aa5.07□□□□□ -1.6
CD44-215ENST00000525241 CRAMP1Q96RY5 1269 aa5.07□□□□□ -1.6
CD44-215ENST00000525241 POLR2AP24928 1970 aaKnown RBP5.06□□□□□ -1.6
CD44-215ENST00000525241 WIPF3A6NGB9 483 aa5.06□□□□□ -1.6
CD44-215ENST00000525241 MANSC4A6NHS7 340 aaPredicted RBP5.06□□□□□ -1.6
CD44-215ENST00000525241 LGALS16A8MUM7 142 aa5.06□□□□□ -1.6
CD44-215ENST00000525241 H3BNC9 293 aa5.06□□□□□ -1.6
CD44-215ENST00000525241 ASNA1O43681 348 aa5.06□□□□□ -1.6
CD44-215ENST00000525241 RBMXL2O75526 392 aaKnown RBP5.06□□□□□ -1.6
CD44-215ENST00000525241 TAF5LO75529 589 aa5.06□□□□□ -1.6
CD44-215ENST00000525241 C1RP00736 705 aa5.06□□□□□ -1.6
CD44-215ENST00000525241 ANXA6P08133 673 aa5.06□□□□□ -1.6
CD44-215ENST00000525241 TMIGD3P0DMS9 266 aaPredicted RBP5.06□□□□□ -1.6
CD44-215ENST00000525241 TXNL4AP83876 142 aaKnown RBP5.06□□□□□ -1.6
CD44-215ENST00000525241 PTK2BQ14289 1009 aa5.06□□□□□ -1.6
CD44-215ENST00000525241 GRM4Q14833 912 aa5.06□□□□□ -1.6
CD44-215ENST00000525241 KRT72Q14CN4 511 aa5.06□□□□□ -1.6
CD44-215ENST00000525241 TRIM71Q2Q1W2 868 aaKnown RBP5.06□□□□□ -1.6
CD44-215ENST00000525241 TMEM119Q4V9L6 283 aa5.06□□□□□ -1.6
CD44-215ENST00000525241 PRAMEF17Q5VTA0 474 aa5.06□□□□□ -1.6
CD44-215ENST00000525241 MYLK4Q86YV6 388 aaPredicted RBP5.06□□□□□ -1.6
CD44-215ENST00000525241 ENAHQ8N8S7 591 aaPredicted RBP5.06□□□□□ -1.6
CD44-215ENST00000525241 FAM71DQ8N9W8 422 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms