RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 DCAF17Q5H9S7 520 aaPredicted RBP12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 EOGTQ5NDL2 527 aa12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 C10orf120Q5SQS8 335 aa12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 BTBD8Q5XKL5 378 aa12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 IL31Q6EBC2 164 aa12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 ARMCX6Q7L4S7 300 aa12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 CCDC186Q7Z3E2 898 aa12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 ZC3H3Q8IXZ2 948 aaKnown RBP12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 ZNF513Q8N8E2 541 aaPredicted RBP12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 FBXL13Q8NEE6 735 aa12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 ENGASEQ8NFI3 743 aa12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 BHMTQ93088 406 aa12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 ACOX2Q99424 681 aa12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 BBS2Q9BXC9 721 aa12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 RAB20Q9NX57 234 aa12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 PLK2Q9NYY3 685 aa12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 DEC1Q9P2X7 70 aa12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 RASAL2Q9UJF2 1139 aa12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 NAGPAQ9UK23 515 aa12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 CIZ1Q9ULV3 898 aaPredicted RBP12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 ATP6V1DQ9Y5K8 247 aa12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 USP3Q9Y6I4 520 aa12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 MUC22E2RYF6 1773 aaPredicted RBP12.43□□□□□ -0.42
CLNS1A-202ENST00000525064 ATXN2Q99700 1313 aaKnown RBP12.43□□□□□ -0.42
CLNS1A-202ENST00000525064 ACACBO00763 2458 aa12.43□□□□□ -0.42
CLNS1A-202ENST00000525064 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.43□□□□□ -0.42
CLNS1A-202ENST00000525064 LNP1A1A4G5 178 aa12.43□□□□□ -0.42
CLNS1A-202ENST00000525064 CETN3O15182 167 aa12.43□□□□□ -0.42
CLNS1A-202ENST00000525064 CACNG3O60359 315 aa12.43□□□□□ -0.42
CLNS1A-202ENST00000525064 ALDH1A2O94788 518 aa12.43□□□□□ -0.42
CLNS1A-202ENST00000525064 KLKB1P03952 638 aa12.43□□□□□ -0.42
CLNS1A-202ENST00000525064 MAP7D1Q3KQU3 841 aa12.43□□□□□ -0.42
CLNS1A-202ENST00000525064 HSF5Q4G112 596 aaPredicted RBP12.43□□□□□ -0.42
CLNS1A-202ENST00000525064 ZNF658Q5TYW1 1059 aaPredicted RBP12.43□□□□□ -0.42
CLNS1A-202ENST00000525064 TCERG1LQ5VWI1 586 aa12.43□□□□□ -0.42
CLNS1A-202ENST00000525064 RNF43Q68DV7 783 aa12.43□□□□□ -0.42
CLNS1A-202ENST00000525064 ANKRD40Q6AI12 368 aa12.43□□□□□ -0.42
CLNS1A-202ENST00000525064 GRAMD4Q6IC98 578 aa12.43□□□□□ -0.42
CLNS1A-202ENST00000525064 BHLHA9Q7RTU4 235 aa12.43□□□□□ -0.42
CLNS1A-202ENST00000525064 CYP2U1Q7Z449 544 aa12.43□□□□□ -0.42
CLNS1A-202ENST00000525064 TMEFF1Q8IYR6 380 aa12.43□□□□□ -0.42
CLNS1A-202ENST00000525064 NDRG1Q92597 394 aaKnown RBP12.43□□□□□ -0.42
CLNS1A-202ENST00000525064 TMEM176AQ96HP8 235 aa12.43□□□□□ -0.42
CLNS1A-202ENST00000525064 HEXIM2Q96MH2 286 aaKnown RBP12.43□□□□□ -0.42
CLNS1A-202ENST00000525064 CD248Q9HCU0 757 aa12.43□□□□□ -0.42
CLNS1A-202ENST00000525064 POLMQ9NP87 494 aaPredicted RBP12.43□□□□□ -0.42
CLNS1A-202ENST00000525064 CD93Q9NPY3 652 aa12.43□□□□□ -0.42
CLNS1A-202ENST00000525064 MARK1Q9P0L2 795 aa12.43□□□□□ -0.42
CLNS1A-202ENST00000525064 BCCIPQ9P287 314 aaKnown RBP eCLIP12.43□□□□□ -0.42
CLNS1A-202ENST00000525064 DNMT3LQ9UJW3 386 aa12.43□□□□□ -0.42
CLNS1A-202ENST00000525064 LSM7Q9UK45 103 aaKnown RBP12.43□□□□□ -0.42
CLNS1A-202ENST00000525064 CACNA1BQ00975 2339 aa12.43□□□□□ -0.42
CLNS1A-202ENST00000525064 A0A1W2PQF6 199 aa12.42□□□□□ -0.42
CLNS1A-202ENST00000525064 HMBSP08397 361 aa12.42□□□□□ -0.42
CLNS1A-202ENST00000525064 CISD3P0C7P0 127 aa12.42□□□□□ -0.42
CLNS1A-202ENST00000525064 HOXB2P14652 356 aa12.42□□□□□ -0.42
CLNS1A-202ENST00000525064 GABRG2P18507 467 aa12.42□□□□□ -0.42
CLNS1A-202ENST00000525064 TRIM21P19474 475 aaKnown RBP12.42□□□□□ -0.42
CLNS1A-202ENST00000525064 PTGER3P43115 390 aa12.42□□□□□ -0.42
CLNS1A-202ENST00000525064 GOLGA7BQ2TAP0 167 aa12.42□□□□□ -0.42
CLNS1A-202ENST00000525064 COBLL1Q53SF7 1204 aa12.42□□□□□ -0.42
CLNS1A-202ENST00000525064 RAB41Q5JT25 222 aa12.42□□□□□ -0.42
CLNS1A-202ENST00000525064 N4BP2L1Q5TBK1 243 aaPredicted RBP12.42□□□□□ -0.42
CLNS1A-202ENST00000525064 ARHGAP17Q68EM7 881 aa12.42□□□□□ -0.42
CLNS1A-202ENST00000525064 ISM2Q6H9L7 571 aa12.42□□□□□ -0.42
CLNS1A-202ENST00000525064 KIAA1211LQ6NV74 962 aa12.42□□□□□ -0.42
CLNS1A-202ENST00000525064 KLHDC10Q6PID8 442 aa12.42□□□□□ -0.42
CLNS1A-202ENST00000525064 PIGZQ86VD9 579 aa12.42□□□□□ -0.42
CLNS1A-202ENST00000525064 CCDC150Q8NCX0 1101 aa12.42□□□□□ -0.42
CLNS1A-202ENST00000525064 PIGKQ92643 395 aa12.42□□□□□ -0.42
CLNS1A-202ENST00000525064 SLC6A17Q9H1V8 727 aa12.42□□□□□ -0.42
CLNS1A-202ENST00000525064 TMEM74BQ9NUR3 256 aa12.42□□□□□ -0.42
CLNS1A-202ENST00000525064 CALCOCO1Q9P1Z2 691 aa12.42□□□□□ -0.42
CLNS1A-202ENST00000525064 RAD54BQ9Y620 910 aa12.42□□□□□ -0.42
CLNS1A-202ENST00000525064 C4orf47A7E2U8 309 aa12.41□□□□□ -0.42
CLNS1A-202ENST00000525064 GIPC1O14908 333 aa12.41□□□□□ -0.42
CLNS1A-202ENST00000525064 SLC16A3O15427 465 aaKnown RBP12.41□□□□□ -0.42
CLNS1A-202ENST00000525064 CD44P16070 742 aaKnown RBP12.41□□□□□ -0.42
CLNS1A-202ENST00000525064 NTSR1P30989 418 aa12.41□□□□□ -0.42
CLNS1A-202ENST00000525064 CORO1AP31146 461 aaKnown RBP12.41□□□□□ -0.42
CLNS1A-202ENST00000525064 PLA2G4AP47712 749 aa12.41□□□□□ -0.42
CLNS1A-202ENST00000525064 GOLGA8FQ08AF8 430 aa12.41□□□□□ -0.42
CLNS1A-202ENST00000525064 GOLGA8DPQ0D2H9 430 aa12.41□□□□□ -0.42
CLNS1A-202ENST00000525064 EFEMP1Q12805 493 aa12.41□□□□□ -0.42
CLNS1A-202ENST00000525064 C11orf74Q86VG3 221 aa12.41□□□□□ -0.42
CLNS1A-202ENST00000525064 PGBD3Q8N328 593 aa12.41□□□□□ -0.42
CLNS1A-202ENST00000525064 DEFB119Q8N690 84 aa12.41□□□□□ -0.42
CLNS1A-202ENST00000525064 UBR7Q8N806 425 aa12.41□□□□□ -0.42
CLNS1A-202ENST00000525064 SPATA20Q8TB22 786 aa12.41□□□□□ -0.42
CLNS1A-202ENST00000525064 SPACA7Q96KW9 195 aa12.41□□□□□ -0.42
CLNS1A-202ENST00000525064 GSDMAQ96QA5 445 aa12.41□□□□□ -0.42
CLNS1A-202ENST00000525064 XPO6Q96QU8 1125 aaKnown RBP12.41□□□□□ -0.42
CLNS1A-202ENST00000525064 LSM14BQ9BX40 385 aaKnown RBP12.41□□□□□ -0.42
CLNS1A-202ENST00000525064 FSCN3Q9NQT6 498 aa12.41□□□□□ -0.42
CLNS1A-202ENST00000525064 RMND1Q9NWS8 449 aa12.41□□□□□ -0.42
CLNS1A-202ENST00000525064 CACNA2D2Q9NY47 1150 aa12.41□□□□□ -0.42
CLNS1A-202ENST00000525064 COQ4Q9Y3A0 265 aa12.41□□□□□ -0.42
CLNS1A-202ENST00000525064 STARD13Q9Y3M8 1113 aa12.41□□□□□ -0.42
CLNS1A-202ENST00000525064 CHD8Q9HCK8 2581 aa12.4□□□□□ -0.42
CLNS1A-202ENST00000525064 NUMA1Q14980 2115 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms