RNA–Protein interactions for RNA: ENST00000524393.5

RBBP4-215, Transcript of RB binding protein 4, chromatin remodeling factor, human

TSL 3

Gene RBBP4, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP4-215	ENST00000524393	TPGS1	Q6ZTW0	290 aa		13.21	□□□□□ -0.29
RBBP4-215	ENST00000524393	RRAGA	Q7L523	313 aa		13.21	□□□□□ -0.29
RBBP4-215	ENST00000524393	ETFBKMT	Q8IXQ9	262 aa		13.21	□□□□□ -0.29
RBBP4-215	ENST00000524393	CCDC33	Q8N5R6	958 aa		13.21	□□□□□ -0.29
RBBP4-215	ENST00000524393	ALLC	Q8N6M5	410 aa		13.21	□□□□□ -0.29
RBBP4-215	ENST00000524393	UBR7	Q8N806	425 aa		13.21	□□□□□ -0.29
RBBP4-215	ENST00000524393	MLKL	Q8NB16	471 aa		13.21	□□□□□ -0.29
RBBP4-215	ENST00000524393	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.21	□□□□□ -0.29
RBBP4-215	ENST00000524393	EHBP1	Q8NDI1	1231 aa		13.21	□□□□□ -0.29
RBBP4-215	ENST00000524393	UBA3	Q8TBC4	463 aa		13.21	□□□□□ -0.29
RBBP4-215	ENST00000524393	RNF139	Q8WU17	664 aa		13.21	□□□□□ -0.29
RBBP4-215	ENST00000524393	GOLGA1	Q92805	767 aa		13.21	□□□□□ -0.29
RBBP4-215	ENST00000524393	WBP2	Q969T9	261 aa		13.21	□□□□□ -0.29
RBBP4-215	ENST00000524393	LOXL4	Q96JB6	756 aa		13.21	□□□□□ -0.29
RBBP4-215	ENST00000524393	ULBP1	Q9BZM6	244 aa		13.21	□□□□□ -0.29
RBBP4-215	ENST00000524393	POLM	Q9NP87	494 aa	Predicted RBP	13.21	□□□□□ -0.29
RBBP4-215	ENST00000524393	DNAJC17	Q9NVM6	304 aa	Known RBP	13.21	□□□□□ -0.29
RBBP4-215	ENST00000524393	MARCH2	Q9P0N8	246 aa		13.21	□□□□□ -0.29
RBBP4-215	ENST00000524393	EBF1	Q9UH73	591 aa		13.21	□□□□□ -0.29
RBBP4-215	ENST00000524393	USP34	Q70CQ2	3546 aa		13.21	□□□□□ -0.29
RBBP4-215	ENST00000524393		A0A0A0MRY4	1105 aa		13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393		M0QYV0	167 aa		13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393	CACNG3	O60359	315 aa		13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393	GREM1	O60565	184 aa		13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393	KLF8	O95600	359 aa	Predicted RBP	13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393	CYBB	P04839	570 aa		13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393	HMBS	P08397	361 aa		13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393	TYR	P14679	529 aa		13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393	FOXK2	Q01167	660 aa		13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393	PUM1	Q14671	1186 aa	Known RBP eCLIP	13.2	□□□□□ -0.3	1e-7	■■■□□ 17
RBBP4-215	ENST00000524393	CNGA2	Q16280	664 aa		13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393	CRY1	Q16526	586 aa		13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393	USP39	Q53GS9	565 aa	Known RBP	13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393	PM20D1	Q6GTS8	502 aa		13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393	SDE2	Q6IQ49	451 aa		13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393	ANO7	Q6IWH7	933 aa		13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393	ERMP1	Q7Z2K6	904 aa		13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393	C11orf74	Q86VG3	221 aa		13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393	ZNF513	Q8N8E2	541 aa	Predicted RBP	13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393	TERB1	Q8NA31	727 aa		13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393	TXNDC5	Q8NBS9	432 aa	Known RBP	13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393	LMO3	Q8TAP4	145 aa		13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393	KCNV2	Q8TDN2	545 aa		13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393	KCTD13	Q8WZ19	329 aa		13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393	CNOT6L	Q96LI5	555 aa	Known RBP	13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393	FAM81B	Q96LP2	452 aa		13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393	INTS2	Q9H0H0	1204 aa	Known RBP	13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393	CNGB3	Q9NQW8	809 aa		13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393	POLR3B	Q9NW08	1133 aa	Predicted RBP	13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393	MARK1	Q9P0L2	795 aa		13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393	DACH1	Q9UI36	760 aa		13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393	CDV3	Q9UKY7	258 aa	Known RBP	13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
RBBP4-215	ENST00000524393	FAM186A	A6NE01	2351 aa		13.19	□□□□□ -0.3
RBBP4-215	ENST00000524393	SLC12A8	A0AV02	714 aa		13.19	□□□□□ -0.3
RBBP4-215	ENST00000524393	TULP2	O00295	520 aa		13.19	□□□□□ -0.3
RBBP4-215	ENST00000524393	ZBTB24	O43167	697 aa	Predicted RBP	13.19	□□□□□ -0.3
RBBP4-215	ENST00000524393	RHOBTB1	O94844	696 aa		13.19	□□□□□ -0.3
RBBP4-215	ENST00000524393	KRT5	P13647	590 aa		13.19	□□□□□ -0.3
RBBP4-215	ENST00000524393	LCP1	P13796	627 aa		13.19	□□□□□ -0.3
RBBP4-215	ENST00000524393	CORO1A	P31146	461 aa	Known RBP	13.19	□□□□□ -0.3
RBBP4-215	ENST00000524393	HOXC13	P31276	330 aa		13.19	□□□□□ -0.3
RBBP4-215	ENST00000524393	GBP1	P32455	592 aa		13.19	□□□□□ -0.3
RBBP4-215	ENST00000524393	KIR2DL1	P43626	348 aa	Predicted RBP	13.19	□□□□□ -0.3
RBBP4-215	ENST00000524393	DGKG	P49619	791 aa		13.19	□□□□□ -0.3
RBBP4-215	ENST00000524393	MFAP3	P55082	362 aa		13.19	□□□□□ -0.3
RBBP4-215	ENST00000524393	CSRP2	Q16527	193 aa		13.19	□□□□□ -0.3
RBBP4-215	ENST00000524393		Q6ZNB5	142 aa		13.19	□□□□□ -0.3
RBBP4-215	ENST00000524393	ENOSF1	Q7L5Y1	443 aa		13.19	□□□□□ -0.3
RBBP4-215	ENST00000524393	ARHGEF19	Q8IW93	802 aa		13.19	□□□□□ -0.3
RBBP4-215	ENST00000524393	FAM114A1	Q8IWE2	563 aa		13.19	□□□□□ -0.3
RBBP4-215	ENST00000524393	PHTF2	Q8N3S3	785 aa		13.19	□□□□□ -0.3
RBBP4-215	ENST00000524393	IL17RC	Q8NAC3	791 aa		13.19	□□□□□ -0.3
RBBP4-215	ENST00000524393	PLD4	Q96BZ4	506 aa		13.19	□□□□□ -0.3
RBBP4-215	ENST00000524393	RMDN1	Q96DB5	314 aa		13.19	□□□□□ -0.3
RBBP4-215	ENST00000524393	TPSD1	Q9BZJ3	242 aa		13.19	□□□□□ -0.3
RBBP4-215	ENST00000524393	CLSTN2	Q9H4D0	955 aa		13.19	□□□□□ -0.3
RBBP4-215	ENST00000524393	ABCC13	Q9NSE7	274 aa		13.19	□□□□□ -0.3
RBBP4-215	ENST00000524393	SEMA4G	Q9NTN9	838 aa		13.19	□□□□□ -0.3
RBBP4-215	ENST00000524393	BCCIP	Q9P287	314 aa	Known RBP eCLIP	13.19	□□□□□ -0.3
RBBP4-215	ENST00000524393	MYO15A	Q9UKN7	3530 aa		13.18	□□□□□ -0.3
RBBP4-215	ENST00000524393	ATG2B	Q96BY7	2078 aa		13.18	□□□□□ -0.3
RBBP4-215	ENST00000524393	SGK1	O00141	431 aa		13.18	□□□□□ -0.3
RBBP4-215	ENST00000524393	MED7	O43513	233 aa		13.18	□□□□□ -0.3
RBBP4-215	ENST00000524393	BRD2	P25440	801 aa	Known RBP	13.18	□□□□□ -0.3
RBBP4-215	ENST00000524393	MTIF2	P46199	727 aa	Known RBP	13.18	□□□□□ -0.3
RBBP4-215	ENST00000524393	HARS2	P49590	506 aa	Known RBP	13.18	□□□□□ -0.3
RBBP4-215	ENST00000524393	MESP2	Q0VG99	397 aa		13.18	□□□□□ -0.3
RBBP4-215	ENST00000524393	RSPO4	Q2I0M5	234 aa	Predicted RBP	13.18	□□□□□ -0.3
RBBP4-215	ENST00000524393	EMC10	Q5UCC4	262 aa		13.18	□□□□□ -0.3
RBBP4-215	ENST00000524393	BSPRY	Q5W0U4	402 aa		13.18	□□□□□ -0.3
RBBP4-215	ENST00000524393	KBTBD6	Q86V97	674 aa		13.18	□□□□□ -0.3
RBBP4-215	ENST00000524393	RASSF3	Q86WH2	238 aa		13.18	□□□□□ -0.3
RBBP4-215	ENST00000524393	DENND1C	Q8IV53	801 aa		13.18	□□□□□ -0.3
RBBP4-215	ENST00000524393	SCML4	Q8N228	414 aa		13.18	□□□□□ -0.3
RBBP4-215	ENST00000524393	PGBD3	Q8N328	593 aa		13.18	□□□□□ -0.3
RBBP4-215	ENST00000524393	C12orf50	Q8NA57	414 aa	Predicted RBP	13.18	□□□□□ -0.3
RBBP4-215	ENST00000524393	IRGQ	Q8WZA9	623 aa		13.18	□□□□□ -0.3
RBBP4-215	ENST00000524393	TFAP2B	Q92481	460 aa		13.18	□□□□□ -0.3
RBBP4-215	ENST00000524393	KAT5	Q92993	513 aa		13.18	□□□□□ -0.3

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