RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	GMNC	A6NCL1	334 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	ARL5C	A6NH57	179 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	CASTOR2	A6NHX0	329 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	GOLGA8M	H3BSY2	632 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	HCRT	O43612	131 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	FAM107A	O95990	144 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	CHN1	P15882	459 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	KRT15	P19012	456 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	LMO2	P25791	158 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	CST5	P28325	142 aa	Predicted RBP	11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	CCND3	P30281	292 aa	Predicted RBP	11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	CD52	P31358	61 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	MATK	P42679	507 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	TKTL1	P51854	596 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	TSPY1	Q01534	308 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	DEUP1	Q05D60	604 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	AUH	Q13825	339 aa	Known RBP	11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	TAF5	Q15542	800 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	MAPRE1	Q15691	268 aa	Known RBP	11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	SEPT7	Q16181	437 aa	Known RBP	11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	ARL13B	Q3SXY8	428 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	BBS9	Q3SYG4	887 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	CCDC38	Q502W7	563 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	DCAF6	Q58WW2	860 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	CAPN12	Q6ZSI9	719 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	ARHGEF18	Q6ZSZ5	1173 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	PDZD4	Q76G19	769 aa	Predicted RBP	11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	PRUNE1	Q86TP1	453 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	RPAIN	Q86UA6	219 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	FAM35A	Q86V20	835 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	PIGZ	Q86VD9	579 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	PALM2	Q8IXS6	379 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	TAB3	Q8N5C8	712 aa	Predicted RBP	11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	ARRDC4	Q8NCT1	418 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	MYCBPAP	Q8TBZ2	947 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	ZNF473	Q8WTR7	871 aa	Known RBP	11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	LPP	Q93052	612 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	LRCH3	Q96II8	777 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	PIWIL1	Q96J94	861 aa	Known RBP	11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	GLT1D1	Q96MS3	346 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	XPO6	Q96QU8	1125 aa	Known RBP	11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	B3GNT5	Q9BYG0	378 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	AAAS	Q9NRG9	546 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	COX16	Q9P0S2	106 aa		11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	SAE1	Q9UBE0	346 aa	Predicted RBP	11.19	□□□□□ -0.62
SPIDR-222	ENST00000524006	SPTBN5	Q9NRC6	3674 aa	Known RBP	11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	POC1B-GALNT4	F8VUJ3	575 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	ADAMTS4	O75173	837 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	SPAG6	O75602	509 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	TCEA3	O75764	348 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	CHRNA1	P02708	482 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	TSHR	P16473	764 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	TKT	P29401	623 aa	Known RBP	11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	NOS2	P35228	1153 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	RPL22	P35268	128 aa	Known RBP	11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	NR2C2	P49116	596 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	CLCNKB	P51801	687 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	MAP3K7CL	P57077	242 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	YWHAZ	P63104	245 aa	Known RBP	11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	SARNP	P82979	210 aa	Known RBP	11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	MGAT3	Q09327	533 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	ITGA7	Q13683	1181 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	SLC25A52	Q3SY17	297 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	ZC3H12A	Q5D1E8	599 aa	Known RBP	11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	ZNF618	Q5T7W0	954 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	SH3PXD2A	Q5TCZ1	1133 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	GKAP1	Q5VSY0	366 aa	Predicted RBP	11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	HEATR6	Q6AI08	1181 aa	Known RBP	11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	TRNP1	Q6NT89	227 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	GLB1L	Q6UWU2	654 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	NPNT	Q6UXI9	565 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	NECAB2	Q7Z6G3	386 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	PSTK	Q8IV42	348 aa	Known RBP	11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	CACNA2D3	Q8IZS8	1091 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	DEFB106A	Q8N104	65 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	VPS52	Q8N1B4	723 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	ANKS4B	Q8N8V4	417 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	ANKRD42	Q8N9B4	389 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	MGARP	Q8TDB4	240 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	CLEC4C	Q8WTT0	213 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	KCTD13	Q8WZ19	329 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	CENPT	Q96BT3	561 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	LPIN3	Q9BQK8	851 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	NRDE2	Q9H7Z3	1164 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	RRN3	Q9NYV6	651 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	SENP1	Q9P0U3	644 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	SAMD15	Q9P1V8	674 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	RCOR3	Q9P2K3	495 aa	Predicted RBP	11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	TBK1	Q9UHD2	729 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	DDX20	Q9UHI6	824 aa	Known RBP	11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	LGALS13	Q9UHV8	139 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	SLC12A6	Q9UHW9	1150 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	PADI3	Q9ULW8	664 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	RRP15	Q9Y3B9	282 aa	Known RBP	11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	PLXNA3	P51805	1871 aa		11.18	□□□□□ -0.62
SPIDR-222	ENST00000524006	EYS	Q5T1H1	3165 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	CDH23	Q9H251	3354 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	GOLGA6L7	A0A1B0GV03	622 aa		11.17	□□□□□ -0.62

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