RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 PPP1R13BQ96KQ4 1090 aa13.12□□□□□ -0.31
CCNC-216ENST00000523961 FOXQ1Q9C009 403 aa13.12□□□□□ -0.31
CCNC-216ENST00000523961 LINC00597Q9H2U6 94 aa13.12□□□□□ -0.31
CCNC-216ENST00000523961 ECT2Q9H8V3 914 aa13.12□□□□□ -0.31
CCNC-216ENST00000523961 MARCH2Q9P0N8 246 aa13.12□□□□□ -0.31
CCNC-216ENST00000523961 CYTH4Q9UIA0 394 aa13.12□□□□□ -0.31
CCNC-216ENST00000523961 RASAL2Q9UJF2 1139 aa13.12□□□□□ -0.31
CCNC-216ENST00000523961 LSM7Q9UK45 103 aaKnown RBP13.12□□□□□ -0.31
CCNC-216ENST00000523961 TICRRQ7Z2Z1 1910 aa13.11□□□□□ -0.31
CCNC-216ENST00000523961 SHISA7A6NL88 538 aa13.11□□□□□ -0.31
CCNC-216ENST00000523961 FAM170BA6NMN3 283 aa13.11□□□□□ -0.31
CCNC-216ENST00000523961 PAPSS1O43252 624 aaPredicted RBP13.11□□□□□ -0.31
CCNC-216ENST00000523961 CDH5P33151 784 aaPredicted RBP13.11□□□□□ -0.31
CCNC-216ENST00000523961 SOX9P48436 509 aa13.11□□□□□ -0.31
CCNC-216ENST00000523961 NUBP1P53384 320 aa13.11□□□□□ -0.31
CCNC-216ENST00000523961 UBASH3AP57075 661 aa13.11□□□□□ -0.31
CCNC-216ENST00000523961 TAF3Q5VWG9 929 aa13.11□□□□□ -0.31
CCNC-216ENST00000523961 HTR3DQ70Z44 454 aa13.11□□□□□ -0.31
CCNC-216ENST00000523961 FMNL3Q8IVF7 1028 aa13.11□□□□□ -0.31
CCNC-216ENST00000523961 ADGRG2Q8IZP9 1017 aa13.11□□□□□ -0.31
CCNC-216ENST00000523961 TMEM105Q8N8V8 129 aa13.11□□□□□ -0.31
CCNC-216ENST00000523961 C1orf131Q8NDD1 294 aaKnown RBP13.11□□□□□ -0.31
CCNC-216ENST00000523961 IPO4Q8TEX9 1081 aaKnown RBP13.11□□□□□ -0.31
CCNC-216ENST00000523961 CLEC4CQ8WTT0 213 aa13.11□□□□□ -0.31
CCNC-216ENST00000523961 DDX1Q92499 740 aaKnown RBP13.11□□□□□ -0.31
CCNC-216ENST00000523961 EDEM1Q92611 657 aa13.11□□□□□ -0.31
CCNC-216ENST00000523961 EXOC4Q96A65 974 aa13.11□□□□□ -0.31
CCNC-216ENST00000523961 FAM149B1Q96BN6 582 aa13.11□□□□□ -0.31
CCNC-216ENST00000523961 CPXM1Q96SM3 734 aa13.11□□□□□ -0.31
CCNC-216ENST00000523961 TRIM62Q9BVG3 475 aa13.11□□□□□ -0.31
CCNC-216ENST00000523961 MYO6Q9UM54 1294 aa13.11□□□□□ -0.31
CCNC-216ENST00000523961 COL4A2P08572 1712 aa13.1□□□□□ -0.31
CCNC-216ENST00000523961 SLC12A8A0AV02 714 aa13.1□□□□□ -0.31
CCNC-216ENST00000523961 OTOL1A6NHN0 477 aaPredicted RBP13.1□□□□□ -0.31
CCNC-216ENST00000523961 SCAMP3O14828 347 aaKnown RBP13.1□□□□□ -0.31
CCNC-216ENST00000523961 PI15O43692 258 aa13.1□□□□□ -0.31
CCNC-216ENST00000523961 STC2O76061 302 aa13.1□□□□□ -0.31
CCNC-216ENST00000523961 LSM8O95777 96 aaKnown RBP13.1□□□□□ -0.31
CCNC-216ENST00000523961 MMEP08473 750 aa13.1□□□□□ -0.31
CCNC-216ENST00000523961 CCDC172P0C7W6 258 aa13.1□□□□□ -0.31
CCNC-216ENST00000523961 TARSP26639 723 aaKnown RBP13.1□□□□□ -0.31
CCNC-216ENST00000523961 ZNF445P59923 1031 aa13.1□□□□□ -0.31
CCNC-216ENST00000523961 CDR2Q01850 454 aa13.1□□□□□ -0.31
CCNC-216ENST00000523961 MSANTD2Q6P1R3 559 aa13.1□□□□□ -0.31
CCNC-216ENST00000523961 BEND5Q7L4P6 421 aa13.1□□□□□ -0.31
CCNC-216ENST00000523961 BBS7Q8IWZ6 715 aa13.1□□□□□ -0.31
CCNC-216ENST00000523961 CCDC105Q8IYK2 499 aa13.1□□□□□ -0.31
CCNC-216ENST00000523961 MSANTD4Q8NCY6 345 aa13.1□□□□□ -0.31
CCNC-216ENST00000523961 WBP2Q969T9 261 aa13.1□□□□□ -0.31
CCNC-216ENST00000523961 PRRX2Q99811 253 aa13.1□□□□□ -0.31
CCNC-216ENST00000523961 DCLK3Q9C098 648 aa13.1□□□□□ -0.31
CCNC-216ENST00000523961 SYNCQ9H7C4 482 aa13.1□□□□□ -0.31
CCNC-216ENST00000523961 NOCTQ9UK39 431 aaKnown RBP13.1□□□□□ -0.31
CCNC-216ENST00000523961 NDRG2Q9UN36 371 aaKnown RBP13.1□□□□□ -0.31
CCNC-216ENST00000523961 ZNF510Q9Y2H8 683 aa13.1□□□□□ -0.31
CCNC-216ENST00000523961 HCN4Q9Y3Q4 1203 aa13.1□□□□□ -0.31
CCNC-216ENST00000523961 HBS1LQ9Y450 684 aaKnown RBP13.1□□□□□ -0.31
CCNC-216ENST00000523961 MTF2Q9Y483 593 aaPredicted RBP13.1□□□□□ -0.31
CCNC-216ENST00000523961 GREM1O60565 184 aa13.09□□□□□ -0.31
CCNC-216ENST00000523961 ADH1CP00326 375 aa13.09□□□□□ -0.31
CCNC-216ENST00000523961 CYP17A1P05093 508 aa13.09□□□□□ -0.31
CCNC-216ENST00000523961 TPM3P06753 285 aa13.09□□□□□ -0.31
CCNC-216ENST00000523961 DCNP07585 359 aaKnown RBP13.09□□□□□ -0.31
CCNC-216ENST00000523961 GLI1P08151 1106 aa13.09□□□□□ -0.31
CCNC-216ENST00000523961 NCAM1P13591 858 aa13.09□□□□□ -0.31
CCNC-216ENST00000523961 FERP16591 822 aa13.09□□□□□ -0.31
CCNC-216ENST00000523961 GJA4P35212 333 aa13.09□□□□□ -0.31
CCNC-216ENST00000523961 MAGEA9P43362 315 aa13.09□□□□□ -0.31
CCNC-216ENST00000523961 DHCR24Q15392 516 aa13.09□□□□□ -0.31
CCNC-216ENST00000523961 PTPN20Q4JDL3 420 aa13.09□□□□□ -0.31
CCNC-216ENST00000523961 EFHC1Q5JVL4 640 aa13.09□□□□□ -0.31
CCNC-216ENST00000523961 OR6B2Q6IFH4 312 aa13.09□□□□□ -0.31
CCNC-216ENST00000523961 TXNDC11Q6PKC3 985 aa13.09□□□□□ -0.31
CCNC-216ENST00000523961 TRIM72Q6ZMU5 477 aa13.09□□□□□ -0.31
CCNC-216ENST00000523961 SLC20A1Q8WUM9 679 aa13.09□□□□□ -0.31
CCNC-216ENST00000523961 CLDN23Q96B33 292 aa13.09□□□□□ -0.31
CCNC-216ENST00000523961 PLD4Q96BZ4 506 aa13.09□□□□□ -0.31
CCNC-216ENST00000523961 NUP58Q9BVL2 599 aa13.09□□□□□ -0.31
CCNC-216ENST00000523961 EDEM3Q9BZQ6 932 aa13.09□□□□□ -0.31
CCNC-216ENST00000523961 KCNH6Q9H252 994 aa13.09□□□□□ -0.31
CCNC-216ENST00000523961 POPDC2Q9HBU9 364 aa13.09□□□□□ -0.31
CCNC-216ENST00000523961 ASNSD1Q9NWL6 643 aa13.09□□□□□ -0.31
CCNC-216ENST00000523961 IFNKQ9P0W0 207 aa13.09□□□□□ -0.31
CCNC-216ENST00000523961 TJP2Q9UDY2 1190 aa13.09□□□□□ -0.31
CCNC-216ENST00000523961 ZNF318Q5VUA4 2279 aa13.08□□□□□ -0.32
CCNC-216ENST00000523961 TRDMT1O14717 391 aaKnown RBP13.08□□□□□ -0.32
CCNC-216ENST00000523961 CAPN9O14815 690 aa13.08□□□□□ -0.32
CCNC-216ENST00000523961 ERBB2P04626 1255 aa13.08□□□□□ -0.32
CCNC-216ENST00000523961 FYNP06241 537 aa13.08□□□□□ -0.32
CCNC-216ENST00000523961 HMBSP08397 361 aa13.08□□□□□ -0.32
CCNC-216ENST00000523961 COL9A1P20849 921 aa13.08□□□□□ -0.32
CCNC-216ENST00000523961 RPS9P46781 194 aaKnown RBP13.08□□□□□ -0.32
CCNC-216ENST00000523961 YWHAZP63104 245 aaKnown RBP13.08□□□□□ -0.32
CCNC-216ENST00000523961 NOMO3P69849 1222 aa13.08□□□□□ -0.32
CCNC-216ENST00000523961 FMO1Q01740 532 aa13.08□□□□□ -0.32
CCNC-216ENST00000523961 ARID5AQ03989 594 aa13.08□□□□□ -0.32
CCNC-216ENST00000523961 LRRC32Q14392 662 aa13.08□□□□□ -0.32
CCNC-216ENST00000523961 PON2Q15165 354 aa13.08□□□□□ -0.32
CCNC-216ENST00000523961 TRIP4Q15650 581 aaPredicted RBP13.08□□□□□ -0.32
CCNC-216ENST00000523961 FIGNQ5HY92 759 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms