RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 RNF17Q9BXT8 1623 aaKnown RBP6.97□□□□□ -1.29
CPNE3-206ENST00000523469 PLA2R1Q13018 1463 aa6.97□□□□□ -1.29
CPNE3-206ENST00000523469 RAPGEF2Q9Y4G8 1499 aa6.97□□□□□ -1.29
CPNE3-206ENST00000523469 MROH2AA6NES4 1674 aa6.96□□□□□ -1.29
CPNE3-206ENST00000523469 CEP170BQ9Y4F5 1589 aaPredicted RBP6.96□□□□□ -1.29
CPNE3-206ENST00000523469 AP4M1O00189 453 aa6.96□□□□□ -1.3
CPNE3-206ENST00000523469 SETSIPP0DME0 302 aa6.96□□□□□ -1.3
CPNE3-206ENST00000523469 SLC5A2P31639 672 aa6.96□□□□□ -1.3
CPNE3-206ENST00000523469 CLCA4Q14CN2 919 aa6.96□□□□□ -1.3
CPNE3-206ENST00000523469 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.96□□□□□ -1.3
CPNE3-206ENST00000523469 CLEC9AQ6UXN8 241 aa6.96□□□□□ -1.3
CPNE3-206ENST00000523469 CCDC28AQ8IWP9 274 aa6.96□□□□□ -1.3
CPNE3-206ENST00000523469 GLIS1Q8NBF1 620 aa6.96□□□□□ -1.3
CPNE3-206ENST00000523469 FAM98AQ8NCA5 519 aaKnown RBP6.96□□□□□ -1.3
CPNE3-206ENST00000523469 ZG16BQ96DA0 208 aa6.96□□□□□ -1.3
CPNE3-206ENST00000523469 MPHOSPH6Q99547 160 aaKnown RBP6.96□□□□□ -1.3
CPNE3-206ENST00000523469 THAP7Q9BT49 309 aaPredicted RBP6.96□□□□□ -1.3
CPNE3-206ENST00000523469 PRDM13Q9H4Q3 707 aa6.96□□□□□ -1.3
CPNE3-206ENST00000523469 TM7SF3Q9NS93 570 aa6.96□□□□□ -1.3
CPNE3-206ENST00000523469 ARPP21Q9UBL0 812 aaPredicted RBP6.96□□□□□ -1.3
CPNE3-206ENST00000523469 STEAP1Q9UHE8 339 aa6.96□□□□□ -1.3
CPNE3-206ENST00000523469 AMFRQ9UKV5 643 aa6.96□□□□□ -1.3
CPNE3-206ENST00000523469 ZMYND8Q9ULU4 1186 aaPredicted RBP6.96□□□□□ -1.3
CPNE3-206ENST00000523469 ALKQ9UM73 1620 aa6.96□□□□□ -1.3
CPNE3-206ENST00000523469 COL15A1P39059 1388 aa6.95□□□□□ -1.3
CPNE3-206ENST00000523469 FAM234BA2RU67 622 aa6.95□□□□□ -1.3
CPNE3-206ENST00000523469 CCNT2O60583 730 aaKnown RBP6.95□□□□□ -1.3
CPNE3-206ENST00000523469 PLA2G6O60733 806 aa6.95□□□□□ -1.3
CPNE3-206ENST00000523469 IGLV2-14P01704 120 aa6.95□□□□□ -1.3
CPNE3-206ENST00000523469 HNRNPCP07910 306 aaKnown RBP eCLIP6.95□□□□□ -1.3
CPNE3-206ENST00000523469 MYCLP12524 364 aaPredicted RBP6.95□□□□□ -1.3
CPNE3-206ENST00000523469 EGR1P18146 543 aa6.95□□□□□ -1.3
CPNE3-206ENST00000523469 PTH2RP49190 550 aa6.95□□□□□ -1.3
CPNE3-206ENST00000523469 ST3GAL2Q16842 350 aa6.95□□□□□ -1.3
CPNE3-206ENST00000523469 SLC5A9Q2M3M2 681 aa6.95□□□□□ -1.3
CPNE3-206ENST00000523469 L1TD1Q5T7N2 865 aaKnown RBP6.95□□□□□ -1.3
CPNE3-206ENST00000523469 FBXO42Q6P3S6 717 aa6.95□□□□□ -1.3
CPNE3-206ENST00000523469 FBXO38Q6PIJ6 1188 aa6.95□□□□□ -1.3
CPNE3-206ENST00000523469 ARHGEF25Q86VW2 580 aa6.95□□□□□ -1.3
CPNE3-206ENST00000523469 SYTL1Q8IYJ3 562 aa6.95□□□□□ -1.3
CPNE3-206ENST00000523469 METTL25Q8N6Q8 603 aa6.95□□□□□ -1.3
CPNE3-206ENST00000523469 C11orf44Q8N8P7 122 aa6.95□□□□□ -1.3
CPNE3-206ENST00000523469 BOLLQ8N9W6 283 aaKnown RBP6.95□□□□□ -1.3
CPNE3-206ENST00000523469 ABHD5Q8WTS1 349 aa6.95□□□□□ -1.3
CPNE3-206ENST00000523469 CTHRC1Q96CG8 243 aa6.95□□□□□ -1.3
CPNE3-206ENST00000523469 LENG8Q96PV6 779 aaPredicted RBP6.95□□□□□ -1.3
CPNE3-206ENST00000523469 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.95□□□□□ -1.3
CPNE3-206ENST00000523469 PCDHAC1Q9H158 963 aa6.95□□□□□ -1.3
CPNE3-206ENST00000523469 NECTIN3Q9NQS3 549 aa6.95□□□□□ -1.3
CPNE3-206ENST00000523469 C11orf21Q9P2W6 132 aa6.95□□□□□ -1.3
CPNE3-206ENST00000523469 ADAM21Q9UKJ8 722 aa6.95□□□□□ -1.3
CPNE3-206ENST00000523469 SLC27A6Q9Y2P4 619 aa6.95□□□□□ -1.3
CPNE3-206ENST00000523469 WNT6Q9Y6F9 365 aa6.95□□□□□ -1.3
CPNE3-206ENST00000523469 TCOF1Q13428 1488 aaKnown RBP6.95□□□□□ -1.3
CPNE3-206ENST00000523469 SHANK2Q9UPX8 1470 aa6.95□□□□□ -1.3
CPNE3-206ENST00000523469 DIP2CQ9Y2E4 1556 aa6.95□□□□□ -1.3
CPNE3-206ENST00000523469 SCAPERQ9BY12 1400 aa6.94□□□□□ -1.3
CPNE3-206ENST00000523469 A8MVJ9 347 aa6.94□□□□□ -1.3
CPNE3-206ENST00000523469 PODXLO00592 558 aa6.94□□□□□ -1.3
CPNE3-206ENST00000523469 CES2O00748 559 aa6.94□□□□□ -1.3
CPNE3-206ENST00000523469 ZNF213O14771 459 aa6.94□□□□□ -1.3
CPNE3-206ENST00000523469 PROP1O75360 226 aa6.94□□□□□ -1.3
CPNE3-206ENST00000523469 C1QL1O75973 258 aa6.94□□□□□ -1.3
CPNE3-206ENST00000523469 ARP10275 920 aa6.94□□□□□ -1.3
CPNE3-206ENST00000523469 CREB1P16220 341 aa6.94□□□□□ -1.3
CPNE3-206ENST00000523469 MST1P26927 711 aa6.94□□□□□ -1.3
CPNE3-206ENST00000523469 PPM1AP35813 382 aa6.94□□□□□ -1.3
CPNE3-206ENST00000523469 GPS1Q13098 491 aa6.94□□□□□ -1.3
CPNE3-206ENST00000523469 MORC3Q14149 939 aa6.94□□□□□ -1.3
CPNE3-206ENST00000523469 SMN1Q16637 294 aaKnown RBP6.94□□□□□ -1.3
CPNE3-206ENST00000523469 MAPKAPK3Q16644 382 aa6.94□□□□□ -1.3
CPNE3-206ENST00000523469 RAP1GAP2Q684P5 730 aa6.94□□□□□ -1.3
CPNE3-206ENST00000523469 DENND2CQ68D51 928 aa6.94□□□□□ -1.3
CPNE3-206ENST00000523469 ABLIM2Q6H8Q1 611 aa6.94□□□□□ -1.3
CPNE3-206ENST00000523469 PTCHD4Q6ZW05 846 aa6.94□□□□□ -1.3
CPNE3-206ENST00000523469 AMIGO2Q86SJ2 522 aa6.94□□□□□ -1.3
CPNE3-206ENST00000523469 FSTL5Q8N475 847 aaPredicted RBP6.94□□□□□ -1.3
CPNE3-206ENST00000523469 NELL1Q92832 810 aa6.94□□□□□ -1.3
CPNE3-206ENST00000523469 WDYHV1Q96HA8 205 aa6.94□□□□□ -1.3
CPNE3-206ENST00000523469 STK33Q9BYT3 514 aa6.94□□□□□ -1.3
CPNE3-206ENST00000523469 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.94□□□□□ -1.3
CPNE3-206ENST00000523469 NPATQ14207 1427 aa6.93□□□□□ -1.3
CPNE3-206ENST00000523469 CNTLNQ9NXG0 1405 aa6.93□□□□□ -1.3
CPNE3-206ENST00000523469 MYO5CQ9NQX4 1742 aa6.93□□□□□ -1.3
CPNE3-206ENST00000523469 KAT6AQ92794 2004 aa6.93□□□□□ -1.3
CPNE3-206ENST00000523469 ADAMTS3O15072 1205 aa6.93□□□□□ -1.3
CPNE3-206ENST00000523469 SPRY2O43597 315 aa6.93□□□□□ -1.3
CPNE3-206ENST00000523469 JTBO76095 146 aa6.93□□□□□ -1.3
CPNE3-206ENST00000523469 HTR7P34969 479 aa6.93□□□□□ -1.3
CPNE3-206ENST00000523469 TECP42680 631 aa6.93□□□□□ -1.3
CPNE3-206ENST00000523469 OS9Q13438 667 aaPredicted RBP6.93□□□□□ -1.3
CPNE3-206ENST00000523469 NAPRTQ6XQN6 538 aa6.93□□□□□ -1.3
CPNE3-206ENST00000523469 PRIMA1Q86XR5 153 aa6.93□□□□□ -1.3
CPNE3-206ENST00000523469 ADGRG3Q86Y34 549 aa6.93□□□□□ -1.3
CPNE3-206ENST00000523469 SFTPA1Q8IWL2 248 aa6.93□□□□□ -1.3
CPNE3-206ENST00000523469 NGDNQ8NEJ9 315 aaKnown RBP6.93□□□□□ -1.3
CPNE3-206ENST00000523469 SUN3Q8TAQ9 357 aa6.93□□□□□ -1.3
CPNE3-206ENST00000523469 TMEM41AQ96HV5 264 aa6.93□□□□□ -1.3
CPNE3-206ENST00000523469 KRTAP4-5Q9BYR2 181 aa6.93□□□□□ -1.3
CPNE3-206ENST00000523469 R3HDMLQ9H3Y0 253 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms