RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 KNOP1Q1ED39 458 aaKnown RBP27.37■■□□□ 1.97
PVT1-219ENST00000523427 FOXD4L6Q3SYB3 417 aaPredicted RBP27.37■■□□□ 1.97
PVT1-219ENST00000523427 LRSAM1Q6UWE0 723 aa27.37■■□□□ 1.97
PVT1-219ENST00000523427 FOXD4L3Q6VB84 417 aaPredicted RBP27.37■■□□□ 1.97
PVT1-219ENST00000523427 PNPLA1Q8N8W4 532 aa27.37■■□□□ 1.97
PVT1-219ENST00000523427 VRTNQ9H8Y1 702 aa27.37■■□□□ 1.97
PVT1-219ENST00000523427 DSPP15924 2871 aaKnown RBP27.37■■□□□ 1.97
PVT1-219ENST00000523427 A0A1W2PQD8 194 aa27.36■■□□□ 1.97
PVT1-219ENST00000523427 CYP26A1O43174 497 aa27.36■■□□□ 1.97
PVT1-219ENST00000523427 CACNG3O60359 315 aa27.36■■□□□ 1.97
PVT1-219ENST00000523427 GREM1O60565 184 aa27.36■■□□□ 1.97
PVT1-219ENST00000523427 VNN1O95497 513 aa27.36■■□□□ 1.97
PVT1-219ENST00000523427 C4BPAP04003 597 aaKnown RBP27.36■■□□□ 1.97
PVT1-219ENST00000523427 DGKGP49619 791 aa27.36■■□□□ 1.97
PVT1-219ENST00000523427 GOLGA8FQ08AF8 430 aa27.36■■□□□ 1.97
PVT1-219ENST00000523427 GOLGA8DPQ0D2H9 430 aa27.36■■□□□ 1.97
PVT1-219ENST00000523427 TRIP6Q15654 476 aaKnown RBP27.36■■□□□ 1.97
PVT1-219ENST00000523427 GPRIN1Q7Z2K8 1008 aa27.36■■□□□ 1.97
PVT1-219ENST00000523427 PARD3BQ8TEW8 1205 aa27.36■■□□□ 1.97
PVT1-219ENST00000523427 MRGPRX1Q96LB2 322 aa27.36■■□□□ 1.97
PVT1-219ENST00000523427 OSER1Q9NX31 292 aa27.36■■□□□ 1.97
PVT1-219ENST00000523427 PPP6R2O75170 966 aa27.35■■□□□ 1.97
PVT1-219ENST00000523427 P4HA1P13674 534 aa27.35■■□□□ 1.97
PVT1-219ENST00000523427 DLG4P78352 724 aa27.35■■□□□ 1.97
PVT1-219ENST00000523427 SYCP2LQ5T4T6 812 aa27.35■■□□□ 1.97
PVT1-219ENST00000523427 SPOPLQ6IQ16 392 aa27.35■■□□□ 1.97
PVT1-219ENST00000523427 CNNM4Q6P4Q7 775 aa27.35■■□□□ 1.97
PVT1-219ENST00000523427 ZNF396Q96N95 335 aaPredicted RBP27.35■■□□□ 1.97
PVT1-219ENST00000523427 GABRG3Q99928 467 aa27.35■■□□□ 1.97
PVT1-219ENST00000523427 DUSP9Q99956 384 aaKnown RBP27.35■■□□□ 1.97
PVT1-219ENST00000523427 NMUR1Q9HB89 426 aa27.35■■□□□ 1.97
PVT1-219ENST00000523427 CD248Q9HCU0 757 aa27.35■■□□□ 1.97
PVT1-219ENST00000523427 TAF4O00268 1085 aa27.34■■□□□ 1.97
PVT1-219ENST00000523427 CUTAO60888 179 aa27.34■■□□□ 1.97
PVT1-219ENST00000523427 FAM200BP0CF97 657 aa27.34■■□□□ 1.97
PVT1-219ENST00000523427 ACO1P21399 889 aaKnown RBP27.34■■□□□ 1.97
PVT1-219ENST00000523427 AP3M2P53677 418 aa27.34■■□□□ 1.97
PVT1-219ENST00000523427 EHHADHQ08426 723 aa27.34■■□□□ 1.97
PVT1-219ENST00000523427 CUL4BQ13620 913 aa27.34■■□□□ 1.97
PVT1-219ENST00000523427 BMT2Q1RMZ1 405 aa27.34■■□□□ 1.97
PVT1-219ENST00000523427 ZNF423Q2M1K9 1284 aa27.34■■□□□ 1.97
PVT1-219ENST00000523427 C12orf56Q8IXR9 622 aa27.34■■□□□ 1.97
PVT1-219ENST00000523427 GRAMD1CQ8IYS0 662 aa27.34■■□□□ 1.97
PVT1-219ENST00000523427 ZNF419Q96HQ0 510 aaPredicted RBP27.34■■□□□ 1.97
PVT1-219ENST00000523427 MIR1-1HGQ9H1L0 117 aa27.34■■□□□ 1.97
PVT1-219ENST00000523427 FAM124BQ9H5Z6 455 aaPredicted RBP27.34■■□□□ 1.97
PVT1-219ENST00000523427 DNAAF2Q9NVR5 837 aaKnown RBP27.34■■□□□ 1.97
PVT1-219ENST00000523427 CGNQ9P2M7 1197 aaKnown RBP27.34■■□□□ 1.97
PVT1-219ENST00000523427 DMXL2Q8TDJ6 3036 aa27.34■■□□□ 1.97
PVT1-219ENST00000523427 MYH10P35580 1976 aa27.33■■□□□ 1.97
PVT1-219ENST00000523427 PCDH15Q96QU1 1955 aa27.33■■□□□ 1.97
PVT1-219ENST00000523427 A0A1W2PQH9 124 aa27.33■■□□□ 1.97
PVT1-219ENST00000523427 RARGP13631 454 aa27.33■■□□□ 1.97
PVT1-219ENST00000523427 GNSP15586 552 aa27.33■■□□□ 1.97
PVT1-219ENST00000523427 SGSM1Q2NKQ1 1148 aa27.33■■□□□ 1.97
PVT1-219ENST00000523427 C10orf120Q5SQS8 335 aa27.33■■□□□ 1.97
PVT1-219ENST00000523427 RAB44Q7Z6P3 723 aaPredicted RBP27.33■■□□□ 1.97
PVT1-219ENST00000523427 CSNK1G1Q9HCP0 422 aa27.33■■□□□ 1.97
PVT1-219ENST00000523427 MARK1Q9P0L2 795 aa27.33■■□□□ 1.97
PVT1-219ENST00000523427 STON1Q9Y6Q2 735 aa27.33■■□□□ 1.97
PVT1-219ENST00000523427 MEI4A8MW99 385 aa27.32■■□□□ 1.96
PVT1-219ENST00000523427 KIF20AO95235 890 aa27.32■■□□□ 1.96
PVT1-219ENST00000523427 CISD3P0C7P0 127 aa27.32■■□□□ 1.96
PVT1-219ENST00000523427 WDR45BQ5MNZ6 344 aa27.32■■□□□ 1.96
PVT1-219ENST00000523427 C19orf48Q6RUI8 117 aa27.32■■□□□ 1.96
PVT1-219ENST00000523427 CRYBG2Q8N1P7 616 aa27.32■■□□□ 1.96
PVT1-219ENST00000523427 CYLDQ9NQC7 956 aa27.32■■□□□ 1.96
PVT1-219ENST00000523427 SUSD2Q9UGT4 822 aa27.32■■□□□ 1.96
PVT1-219ENST00000523427 SCML2Q9UQR0 700 aa27.32■■□□□ 1.96
PVT1-219ENST00000523427 FASNP49327 2511 aaKnown RBP27.32■■□□□ 1.96
PVT1-219ENST00000523427 SCAPQ12770 1279 aa27.31■■□□□ 1.96
PVT1-219ENST00000523427 GRIK2Q13002 908 aa27.31■■□□□ 1.96
PVT1-219ENST00000523427 HNRNPDQ14103 355 aaKnown RBP27.31■■□□□ 1.96
PVT1-219ENST00000523427 STARD3Q14849 445 aa27.31■■□□□ 1.96
PVT1-219ENST00000523427 NAXDQ8IW45 347 aa27.31■■□□□ 1.96
PVT1-219ENST00000523427 GOLGA5Q8TBA6 731 aa27.31■■□□□ 1.96
PVT1-219ENST00000523427 FOXJ1Q92949 421 aa27.31■■□□□ 1.96
PVT1-219ENST00000523427 TOE1Q96GM8 510 aaKnown RBP27.31■■□□□ 1.96
PVT1-219ENST00000523427 INTS4Q96HW7 963 aaKnown RBP27.31■■□□□ 1.96
PVT1-219ENST00000523427 GPR174Q9BXC1 333 aa27.31■■□□□ 1.96
PVT1-219ENST00000523427 PRDM16Q9HAZ2 1276 aa27.31■■□□□ 1.96
PVT1-219ENST00000523427 DNMT3LQ9UJW3 386 aa27.31■■□□□ 1.96
PVT1-219ENST00000523427 NAGPAQ9UK23 515 aa27.31■■□□□ 1.96
PVT1-219ENST00000523427 ANKRD11Q6UB99 2663 aaPredicted RBP27.31■■□□□ 1.96
PVT1-219ENST00000523427 HMBSP08397 361 aa27.3■■□□□ 1.96
PVT1-219ENST00000523427 FTH1P19P0C7X4 201 aa27.3■■□□□ 1.96
PVT1-219ENST00000523427 CD6P30203 668 aa27.3■■□□□ 1.96
PVT1-219ENST00000523427 PLA2G4AP47712 749 aa27.3■■□□□ 1.96
PVT1-219ENST00000523427 FUT11Q495W5 492 aa27.3■■□□□ 1.96
PVT1-219ENST00000523427 CLEC20AQ6ZU45 233 aa27.3■■□□□ 1.96
PVT1-219ENST00000523427 UNC93AQ86WB7 457 aa27.3■■□□□ 1.96
PVT1-219ENST00000523427 CACUL1Q86Y37 369 aa27.3■■□□□ 1.96
PVT1-219ENST00000523427 ZCCHC9Q8N567 271 aaKnown RBP27.3■■□□□ 1.96
PVT1-219ENST00000523427 P2RY11Q96G91 374 aa27.3■■□□□ 1.96
PVT1-219ENST00000523427 TWNKQ96RR1 684 aa27.3■■□□□ 1.96
PVT1-219ENST00000523427 MAGEF1Q9HAY2 307 aa27.3■■□□□ 1.96
PVT1-219ENST00000523427 WDFY3Q8IZQ1 3526 aa27.29■■□□□ 1.96
PVT1-219ENST00000523427 PVALEFA0A1B0GWK0 134 aa27.29■■□□□ 1.96
PVT1-219ENST00000523427 PIK3CAP42336 1068 aa27.29■■□□□ 1.96
PVT1-219ENST00000523427 CLDN10P78369 228 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms