RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 SCML4Q8N228 414 aa16.09■□□□□ 0.17
CTNNA1-236ENST00000522792 SPPL2BQ8TCT7 592 aa16.09■□□□□ 0.17
CTNNA1-236ENST00000522792 DPH5Q9H2P9 285 aa16.09■□□□□ 0.17
CTNNA1-236ENST00000522792 DHX35Q9H5Z1 703 aaKnown RBP16.09■□□□□ 0.17
CTNNA1-236ENST00000522792 FAM204AQ9H8W3 233 aa16.09■□□□□ 0.17
CTNNA1-236ENST00000522792 PCDH18Q9HCL0 1135 aa16.09■□□□□ 0.17
CTNNA1-236ENST00000522792 PIGVQ9NUD9 493 aa16.09■□□□□ 0.17
CTNNA1-236ENST00000522792 ZNF446Q9NWS9 450 aa16.09■□□□□ 0.17
CTNNA1-236ENST00000522792 PCYOX1Q9UHG3 505 aa16.09■□□□□ 0.17
CTNNA1-236ENST00000522792 ZMYND8Q9ULU4 1186 aaPredicted RBP16.09■□□□□ 0.17
CTNNA1-236ENST00000522792 AP4E1Q9UPM8 1137 aa16.09■□□□□ 0.17
CTNNA1-236ENST00000522792 KIAA1671Q9BY89 1806 aa16.09■□□□□ 0.17
CTNNA1-236ENST00000522792 MDM4O15151 490 aa16.09■□□□□ 0.17
CTNNA1-236ENST00000522792 ERLIN1O75477 346 aa16.09■□□□□ 0.17
CTNNA1-236ENST00000522792 DNAJB2P25686 324 aa16.09■□□□□ 0.17
CTNNA1-236ENST00000522792 FNTAP49354 379 aa16.09■□□□□ 0.17
CTNNA1-236ENST00000522792 GLUD2P49448 558 aa16.09■□□□□ 0.17
CTNNA1-236ENST00000522792 CARSP49589 748 aaKnown RBP16.09■□□□□ 0.17
CTNNA1-236ENST00000522792 USP46P62068 366 aa16.09■□□□□ 0.17
CTNNA1-236ENST00000522792 BNIPLQ7Z465 357 aa16.09■□□□□ 0.17
CTNNA1-236ENST00000522792 AUTS2Q8WXX7 1259 aa16.09■□□□□ 0.17
CTNNA1-236ENST00000522792 RUBCNQ92622 972 aa16.09■□□□□ 0.17
CTNNA1-236ENST00000522792 CCDC114Q96M63 670 aa16.09■□□□□ 0.17
CTNNA1-236ENST00000522792 HERC2P3Q9BVR0 1158 aa16.09■□□□□ 0.17
CTNNA1-236ENST00000522792 OXCT2Q9BYC2 517 aaPredicted RBP16.09■□□□□ 0.17
CTNNA1-236ENST00000522792 ARFGAP3Q9NP61 516 aa16.09■□□□□ 0.17
CTNNA1-236ENST00000522792 DDIT4Q9NX09 232 aa16.09■□□□□ 0.17
CTNNA1-236ENST00000522792 SAE1Q9UBE0 346 aaPredicted RBP16.09■□□□□ 0.17
CTNNA1-236ENST00000522792 MYO16Q9Y6X6 1858 aa16.09■□□□□ 0.17
CTNNA1-236ENST00000522792 ENDOD1O94919 500 aa16.08■□□□□ 0.16
CTNNA1-236ENST00000522792 HAPLN1P10915 354 aaPredicted RBP16.08■□□□□ 0.16
CTNNA1-236ENST00000522792 SLC8B1Q6J4K2 584 aa16.08■□□□□ 0.16
CTNNA1-236ENST00000522792 SCD5Q86SK9 330 aa16.08■□□□□ 0.16
CTNNA1-236ENST00000522792 CLSTN3Q9BQT9 956 aa16.08■□□□□ 0.16
CTNNA1-236ENST00000522792 NMUR1Q9HB89 426 aa16.08■□□□□ 0.16
CTNNA1-236ENST00000522792 UTP11Q9Y3A2 253 aaKnown RBP16.08■□□□□ 0.16
CTNNA1-236ENST00000522792 BACE2Q9Y5Z0 518 aa16.08■□□□□ 0.16
CTNNA1-236ENST00000522792 A0A1W2PQH9 124 aa16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 FAM187AA6NFU0 413 aa16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 DSG1Q02413 1049 aa16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 MTMR3Q13615 1198 aa16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 PDK2Q15119 407 aa16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 CCNG2Q16589 344 aa16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 BTBD8Q5XKL5 378 aa16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 PSRC1Q6PGN9 363 aaPredicted RBP16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 TAC4Q86UU9 113 aa16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 MAP7D3Q8IWC1 876 aa16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 PYROXD2Q8N2H3 581 aa16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 FIBCD1Q8N539 461 aa16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 GIPC2Q8TF65 315 aa16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 GDAP1L1Q96MZ0 367 aa16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 KCTD15Q96SI1 283 aaPredicted RBP16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 MAK16Q9BXY0 300 aaKnown RBP16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 FZD10Q9ULW2 581 aa16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 NFU1Q9UMS0 254 aa16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 DAPK3O43293 454 aa16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 LIASO43766 372 aa16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 ECEL1O95672 775 aa16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 IL4RP24394 825 aa16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 L1CAMP32004 1257 aa16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 HTRA4P83105 476 aaPredicted RBP16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 SMARCB1Q12824 385 aa16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 BEND6Q5SZJ8 279 aaPredicted RBP16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 BBS12Q6ZW61 710 aa16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 DDX53Q86TM3 631 aaKnown RBP16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 VPS52Q8N1B4 723 aa16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 DQX1Q8TE96 717 aaKnown RBP16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 C2orf15Q8WU43 125 aaKnown RBP16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 HNRNPLLQ8WVV9 542 aaKnown RBP16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 RUNDC3BQ96NL0 473 aa16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 RAB17Q9H0T7 212 aa16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 HOMER3Q9NSC5 361 aa16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 RASAL2Q9UJF2 1139 aa16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 NUDT5Q9UKK9 219 aa16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 DNPEPQ9ULA0 475 aa16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 EFR3BQ9Y2G0 817 aa16.07■□□□□ 0.16
CTNNA1-236ENST00000522792 URODP06132 367 aa16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 TNFRSF8P28908 595 aa16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 OTUD4Q01804 1114 aaKnown RBP16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 KRT17Q04695 432 aa16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 PPP1R7Q15435 360 aa16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 DPYSL2Q16555 572 aa16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 ANKRD20A8PQ5CZ79 823 aa16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 NPNTQ6UXI9 565 aa16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 DENND5BQ6ZUT9 1274 aa16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 PKNOX2Q96KN3 472 aa16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 RNF157Q96PX1 679 aa16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 ERP44Q9BS26 406 aa16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 WDR6Q9NNW5 1121 aaKnown RBP16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 ANLNQ9NQW6 1124 aa16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 AAASQ9NRG9 546 aa16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 ABCC13Q9NSE7 274 aa16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 OSER1Q9NX31 292 aa16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 MTMR10Q9NXD2 777 aa16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 GMIPQ9P107 970 aa16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 SCML2Q9UQR0 700 aa16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 PCDHB12Q9Y5F1 795 aa16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 BHMG1C9JSJ3 638 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms