RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 RPL34P49207 117 aaKnown RBP12.94□□□□□ -0.34
PABPC1-219ENST00000522387 HABP4Q5JVS0 413 aaKnown RBP12.94□□□□□ -0.34
PABPC1-219ENST00000522387 BTBD8Q5XKL5 378 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 ELMOD1Q8N336 334 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 RXFP2Q8WXD0 754 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 ING5Q8WYH8 240 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 TRIM11Q96F44 468 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 PSMB7Q99436 277 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 ATXN3LQ9H3M9 355 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 FBXO44Q9H4M3 255 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 PLEKHA4Q9H4M7 779 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 DNMT3BQ9UBC3 853 aaKnown RBP12.94□□□□□ -0.34
PABPC1-219ENST00000522387 SIGLEC16A6NMB1 481 aa12.93□□□□□ -0.34
PABPC1-219ENST00000522387 H3BQ06 376 aaPredicted RBP12.93□□□□□ -0.34
PABPC1-219ENST00000522387 MYO1FO00160 1098 aa12.93□□□□□ -0.34
PABPC1-219ENST00000522387 ZNF185O15231 689 aa12.93□□□□□ -0.34
PABPC1-219ENST00000522387 MSI1O43347 362 aaKnown RBP12.93□□□□□ -0.34
PABPC1-219ENST00000522387 PALMO75781 387 aa12.93□□□□□ -0.34
PABPC1-219ENST00000522387 HMBSP08397 361 aa12.93□□□□□ -0.34
PABPC1-219ENST00000522387 MYBL1P10243 752 aa12.93□□□□□ -0.34
PABPC1-219ENST00000522387 SNX16P57768 344 aa12.93□□□□□ -0.34
PABPC1-219ENST00000522387 ZNF252P-AS1Q0IIN9 211 aa12.93□□□□□ -0.34
PABPC1-219ENST00000522387 LLGL1Q15334 1064 aa12.93□□□□□ -0.34
PABPC1-219ENST00000522387 TXNDC8Q6A555 127 aa12.93□□□□□ -0.34
PABPC1-219ENST00000522387 PM20D1Q6GTS8 502 aa12.93□□□□□ -0.34
PABPC1-219ENST00000522387 GAREM2Q75VX8 874 aa12.93□□□□□ -0.34
PABPC1-219ENST00000522387 HNRNPLLQ8WVV9 542 aaKnown RBP12.93□□□□□ -0.34
PABPC1-219ENST00000522387 ACSF2Q96CM8 615 aaPredicted RBP12.93□□□□□ -0.34
PABPC1-219ENST00000522387 CDX2Q99626 313 aaPredicted RBP12.93□□□□□ -0.34
PABPC1-219ENST00000522387 NACA2Q9H009 215 aa12.93□□□□□ -0.34
PABPC1-219ENST00000522387 SLITRK6Q9H5Y7 841 aa12.93□□□□□ -0.34
PABPC1-219ENST00000522387 POPDC2Q9HBU9 364 aa12.93□□□□□ -0.34
PABPC1-219ENST00000522387 MRPL47Q9HD33 250 aaKnown RBP12.93□□□□□ -0.34
PABPC1-219ENST00000522387 TMEM59LQ9UK28 342 aa12.93□□□□□ -0.34
PABPC1-219ENST00000522387 RTN3O95197 1032 aaPredicted RBP12.93□□□□□ -0.34
PABPC1-219ENST00000522387 PSMA2P25787 234 aa12.93□□□□□ -0.34
PABPC1-219ENST00000522387 GYS2P54840 703 aa12.93□□□□□ -0.34
PABPC1-219ENST00000522387 SLC5A9Q2M3M2 681 aa12.93□□□□□ -0.34
PABPC1-219ENST00000522387 PPP1R15BQ5SWA1 713 aa12.93□□□□□ -0.34
PABPC1-219ENST00000522387 BEND6Q5SZJ8 279 aaPredicted RBP12.93□□□□□ -0.34
PABPC1-219ENST00000522387 SCYL2Q6P3W7 929 aa12.93□□□□□ -0.34
PABPC1-219ENST00000522387 TMEM150AQ86TG1 271 aa12.93□□□□□ -0.34
PABPC1-219ENST00000522387 MAB21L3Q8N8X9 362 aa12.93□□□□□ -0.34
PABPC1-219ENST00000522387 SMG7Q92540 1137 aaKnown RBP12.93□□□□□ -0.34
PABPC1-219ENST00000522387 SLC22A12Q96S37 553 aa12.93□□□□□ -0.34
PABPC1-219ENST00000522387 PNKPQ96T60 521 aa12.93□□□□□ -0.34
PABPC1-219ENST00000522387 SMG9Q9H0W8 520 aaKnown RBP12.93□□□□□ -0.34
PABPC1-219ENST00000522387 TMPRSS4Q9NRS4 437 aa12.93□□□□□ -0.34
PABPC1-219ENST00000522387 WDR35Q9P2L0 1181 aa12.93□□□□□ -0.34
PABPC1-219ENST00000522387 PCSK1NQ9UHG2 260 aa12.93□□□□□ -0.34
PABPC1-219ENST00000522387 RAB21Q9UL25 225 aa12.93□□□□□ -0.34
PABPC1-219ENST00000522387 SCML2Q9UQR0 700 aa12.93□□□□□ -0.34
PABPC1-219ENST00000522387 SCINQ9Y6U3 715 aa12.93□□□□□ -0.34
PABPC1-219ENST00000522387 TMEM191CA6NGB0 347 aa12.92□□□□□ -0.34
PABPC1-219ENST00000522387 PJA2O43164 708 aa12.92□□□□□ -0.34
PABPC1-219ENST00000522387 RHOP08100 348 aa12.92□□□□□ -0.34
PABPC1-219ENST00000522387 EFEMP1Q12805 493 aa12.92□□□□□ -0.34
PABPC1-219ENST00000522387 SMTNL2Q2TAL5 461 aa12.92□□□□□ -0.34
PABPC1-219ENST00000522387 CCDC14Q49A88 953 aa12.92□□□□□ -0.34
PABPC1-219ENST00000522387 KCNT1Q5JUK3 1230 aa12.92□□□□□ -0.34
PABPC1-219ENST00000522387 EFHC1Q5JVL4 640 aa12.92□□□□□ -0.34
PABPC1-219ENST00000522387 C10orf120Q5SQS8 335 aa12.92□□□□□ -0.34
PABPC1-219ENST00000522387 SLC26A9Q7LBE3 791 aa12.92□□□□□ -0.34
PABPC1-219ENST00000522387 MON1AQ86VX9 555 aa12.92□□□□□ -0.34
PABPC1-219ENST00000522387 RHOT2Q8IXI1 618 aa12.92□□□□□ -0.34
PABPC1-219ENST00000522387 ASAH2Q9NR71 780 aa12.92□□□□□ -0.34
PABPC1-219ENST00000522387 TLR8Q9NR97 1041 aaKnown RBP12.92□□□□□ -0.34
PABPC1-219ENST00000522387 SMPD4Q9NXE4 827 aa12.92□□□□□ -0.34
PABPC1-219ENST00000522387 INTUQ9ULD6 942 aa12.92□□□□□ -0.34
PABPC1-219ENST00000522387 GRID2IPA4D2P6 1211 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 C2CD4BA6NLJ0 364 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 M0QYT0 321 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 NCK2O43639 380 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 TLR5O60602 858 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 HSF2BPO75031 334 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 TBX10O75333 385 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 ERLIN1O75477 346 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 FBXO21O94952 628 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 RARGP13631 454 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 SDC4P31431 198 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 KCNC3Q14003 757 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 PDZD4Q76G19 769 aaPredicted RBP12.91□□□□□ -0.34
PABPC1-219ENST00000522387 ITIH5Q86UX2 942 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 ZDHHC17Q8IUH5 632 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 TPCN2Q8NHX9 752 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 ZNF707Q96C28 371 aaPredicted RBP12.91□□□□□ -0.34
PABPC1-219ENST00000522387 TBCBQ99426 244 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 HINFPQ9BQA5 517 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 MAGEB5Q9BZ81 275 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 TSGA10Q9BZW7 698 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 RNF38Q9H0F5 515 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 AVENQ9NQS1 362 aaPredicted RBP12.91□□□□□ -0.34
PABPC1-219ENST00000522387 KLHL11Q9NVR0 708 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.91□□□□□ -0.34
PABPC1-219ENST00000522387 HSFX1Q9UBD0 423 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 ZNF840PA6NDX5 716 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 RHOXF2BP0C7M4 288 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 GPD1P21695 349 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 CXCR5P32302 372 aa12.91□□□□□ -0.34
PABPC1-219ENST00000522387 GGCXP38435 758 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms