RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 FAM172AQ8WUF8 416 aa13.98□□□□□ -0.17
CLK4-210ENST00000522136 CASP10Q92851 521 aa13.98□□□□□ -0.17
CLK4-210ENST00000522136 NT5C3BQ969T7 300 aa13.98□□□□□ -0.17
CLK4-210ENST00000522136 ZNF707Q96C28 371 aaPredicted RBP13.98□□□□□ -0.17
CLK4-210ENST00000522136 CALR3Q96L12 384 aaKnown RBP13.98□□□□□ -0.17
CLK4-210ENST00000522136 PRKD2Q9BZL6 878 aa13.98□□□□□ -0.17
CLK4-210ENST00000522136 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.98□□□□□ -0.17
CLK4-210ENST00000522136 TRPM5Q9NZQ8 1165 aa13.98□□□□□ -0.17
CLK4-210ENST00000522136 M0QYT0 321 aa13.97□□□□□ -0.17
CLK4-210ENST00000522136 SPOPO43791 374 aa13.97□□□□□ -0.17
CLK4-210ENST00000522136 LRCH4O75427 683 aa13.97□□□□□ -0.17
CLK4-210ENST00000522136 HNRNPA1P09651 372 aaKnown RBP eCLIP13.97□□□□□ -0.17
CLK4-210ENST00000522136 HOXA9P31269 272 aa13.97□□□□□ -0.17
CLK4-210ENST00000522136 CCR2P41597 374 aa13.97□□□□□ -0.17
CLK4-210ENST00000522136 HDAC4P56524 1084 aa13.97□□□□□ -0.17
CLK4-210ENST00000522136 NME3Q13232 169 aa13.97□□□□□ -0.17
CLK4-210ENST00000522136 MEI1Q5TIA1 1274 aa13.97□□□□□ -0.17
CLK4-210ENST00000522136 TXNRD3NBQ6F5E7 133 aa13.97□□□□□ -0.17
CLK4-210ENST00000522136 RSRC2Q7L4I2 434 aaKnown RBP13.97□□□□□ -0.17
CLK4-210ENST00000522136 GRASPQ7Z6J2 395 aaPredicted RBP13.97□□□□□ -0.17
CLK4-210ENST00000522136 TAC4Q86UU9 113 aa13.97□□□□□ -0.17
CLK4-210ENST00000522136 SYCE1Q8N0S2 351 aa13.97□□□□□ -0.17
CLK4-210ENST00000522136 EFHBQ8N7U6 833 aa13.97□□□□□ -0.17
CLK4-210ENST00000522136 PDZD8Q8NEN9 1154 aa13.97□□□□□ -0.17
CLK4-210ENST00000522136 RNF139Q8WU17 664 aa13.97□□□□□ -0.17
CLK4-210ENST00000522136 ZNF592Q92610 1267 aa13.97□□□□□ -0.17
CLK4-210ENST00000522136 CENPIQ92674 756 aaPredicted RBP13.97□□□□□ -0.17
CLK4-210ENST00000522136 ZDHHC7Q9NXF8 308 aa13.97□□□□□ -0.17
CLK4-210ENST00000522136 CLIC5Q9NZA1 410 aa13.97□□□□□ -0.17
CLK4-210ENST00000522136 LMCD1Q9NZU5 365 aa13.97□□□□□ -0.17
CLK4-210ENST00000522136 UXTQ9UBK9 157 aaPredicted RBP13.97□□□□□ -0.17
CLK4-210ENST00000522136 PCSK1NQ9UHG2 260 aa13.97□□□□□ -0.17
CLK4-210ENST00000522136 DPP7Q9UHL4 492 aa13.97□□□□□ -0.17
CLK4-210ENST00000522136 AMFRQ9UKV5 643 aa13.97□□□□□ -0.17
CLK4-210ENST00000522136 C2orf16Q68DN1 1984 aa13.97□□□□□ -0.17
CLK4-210ENST00000522136 C2orf78A6NCI8 922 aa13.96□□□□□ -0.17
CLK4-210ENST00000522136 MSI1O43347 362 aaKnown RBP13.96□□□□□ -0.17
CLK4-210ENST00000522136 TLR5O60602 858 aa13.96□□□□□ -0.17
CLK4-210ENST00000522136 RNF8O76064 485 aa13.96□□□□□ -0.17
CLK4-210ENST00000522136 TRUB2O95900 331 aaKnown RBP13.96□□□□□ -0.17
CLK4-210ENST00000522136 ATP1A1P05023 1023 aaKnown RBP13.96□□□□□ -0.17
CLK4-210ENST00000522136 RHOP08100 348 aa13.96□□□□□ -0.17
CLK4-210ENST00000522136 PTPN2P17706 415 aa13.96□□□□□ -0.17
CLK4-210ENST00000522136 MAN1A1P33908 653 aa13.96□□□□□ -0.17
CLK4-210ENST00000522136 GJC1P36383 396 aa13.96□□□□□ -0.17
CLK4-210ENST00000522136 MARCKSL1P49006 195 aa13.96□□□□□ -0.17
CLK4-210ENST00000522136 CYP4F8P98187 520 aa13.96□□□□□ -0.17
CLK4-210ENST00000522136 C10orf120Q5SQS8 335 aa13.96□□□□□ -0.17
CLK4-210ENST00000522136 SCYL2Q6P3W7 929 aa13.96□□□□□ -0.17
CLK4-210ENST00000522136 Q7L0L9 218 aa13.96□□□□□ -0.17
CLK4-210ENST00000522136 BEND5Q7L4P6 421 aa13.96□□□□□ -0.17
CLK4-210ENST00000522136 MICALL1Q8N3F8 863 aa13.96□□□□□ -0.17
CLK4-210ENST00000522136 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.96□□□□□ -0.17
CLK4-210ENST00000522136 OVCA2Q8WZ82 227 aa13.96□□□□□ -0.17
CLK4-210ENST00000522136 KRT35Q92764 455 aa13.96□□□□□ -0.17
CLK4-210ENST00000522136 TCEAL4Q96EI5 215 aa13.96□□□□□ -0.17
CLK4-210ENST00000522136 TLR10Q9BXR5 811 aa13.96□□□□□ -0.17
CLK4-210ENST00000522136 ASAH2Q9NR71 780 aa13.96□□□□□ -0.17
CLK4-210ENST00000522136 PIGVQ9NUD9 493 aa13.96□□□□□ -0.17
CLK4-210ENST00000522136 DDIT4Q9NX09 232 aa13.96□□□□□ -0.17
CLK4-210ENST00000522136 CDH22Q9UJ99 828 aa13.96□□□□□ -0.17
CLK4-210ENST00000522136 STAP1Q9ULZ2 295 aa13.96□□□□□ -0.17
CLK4-210ENST00000522136 A0A1W2PRU2 124 aa13.96□□□□□ -0.18
CLK4-210ENST00000522136 XYLBO75191 536 aa13.96□□□□□ -0.18
CLK4-210ENST00000522136 RALAP11233 206 aa13.96□□□□□ -0.18
CLK4-210ENST00000522136 IL1R2P27930 398 aa13.96□□□□□ -0.18
CLK4-210ENST00000522136 MIPP30301 263 aa13.96□□□□□ -0.18
CLK4-210ENST00000522136 CASQ1P31415 396 aa13.96□□□□□ -0.18
CLK4-210ENST00000522136 SLC1A1P43005 524 aa13.96□□□□□ -0.18
CLK4-210ENST00000522136 PSEN1P49768 467 aa13.96□□□□□ -0.18
CLK4-210ENST00000522136 DEUP1Q05D60 604 aa13.96□□□□□ -0.18
CLK4-210ENST00000522136 EFEMP1Q12805 493 aa13.96□□□□□ -0.18
CLK4-210ENST00000522136 ADAM15Q13444 863 aa13.96□□□□□ -0.18
CLK4-210ENST00000522136 ATP13A4Q4VNC1 1196 aa13.96□□□□□ -0.18
CLK4-210ENST00000522136 RARS2Q5T160 578 aaKnown RBP13.96□□□□□ -0.18
CLK4-210ENST00000522136 SNX30Q5VWJ9 437 aa13.96□□□□□ -0.18
CLK4-210ENST00000522136 ELMSAN1Q6PJG2 1045 aa13.96□□□□□ -0.18
CLK4-210ENST00000522136 BNIPLQ7Z465 357 aa13.96□□□□□ -0.18
CLK4-210ENST00000522136 SMG7Q92540 1137 aaKnown RBP13.96□□□□□ -0.18
CLK4-210ENST00000522136 CD101Q93033 1021 aa13.96□□□□□ -0.18
CLK4-210ENST00000522136 PEBP4Q96S96 227 aa13.96□□□□□ -0.18
CLK4-210ENST00000522136 PSMB7Q99436 277 aa13.96□□□□□ -0.18
CLK4-210ENST00000522136 TRIM62Q9BVG3 475 aa13.96□□□□□ -0.18
CLK4-210ENST00000522136 FAM204AQ9H8W3 233 aa13.96□□□□□ -0.18
CLK4-210ENST00000522136 PIDD1Q9HB75 910 aa13.96□□□□□ -0.18
CLK4-210ENST00000522136 JRKLQ9Y4A0 524 aa13.96□□□□□ -0.18
CLK4-210ENST00000522136 COCHO43405 550 aa13.95□□□□□ -0.18
CLK4-210ENST00000522136 ACAP1Q15027 740 aa13.95□□□□□ -0.18
CLK4-210ENST00000522136 SLC5A9Q2M3M2 681 aa13.95□□□□□ -0.18
CLK4-210ENST00000522136 PABPC1LQ4VXU2 614 aaKnown RBP13.95□□□□□ -0.18
CLK4-210ENST00000522136 HECTD3Q5T447 861 aa13.95□□□□□ -0.18
CLK4-210ENST00000522136 STXBP5Q5T5C0 1151 aa13.95□□□□□ -0.18
CLK4-210ENST00000522136 TXNDC8Q6A555 127 aa13.95□□□□□ -0.18
CLK4-210ENST00000522136 MSANTD2Q6P1R3 559 aa13.95□□□□□ -0.18
CLK4-210ENST00000522136 EP400NLQ6ZTU2 488 aa13.95□□□□□ -0.18
CLK4-210ENST00000522136 FAM131BQ86XD5 332 aa13.95□□□□□ -0.18
CLK4-210ENST00000522136 MIB1Q86YT6 1006 aa13.95□□□□□ -0.18
CLK4-210ENST00000522136 ACSF2Q96CM8 615 aaPredicted RBP13.95□□□□□ -0.18
CLK4-210ENST00000522136 CYP2S1Q96SQ9 504 aa13.95□□□□□ -0.18
CLK4-210ENST00000522136 RNF38Q9H0F5 515 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms