RNA–Protein interactions for RNA: ENST00000522111.2

TRNP1-201, Transcript of TMF1-regulated nuclear protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRNP1, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1-201ENST00000522111 AP4E1Q9UPM8 1137 aa28.37■■■□□ 2.13
TRNP1-201ENST00000522111 CHRNA3P32297 505 aa28.36■■■□□ 2.13
TRNP1-201ENST00000522111 RBM10P98175 930 aaKnown RBP28.36■■■□□ 2.13
TRNP1-201ENST00000522111 DR1Q01658 176 aa28.36■■■□□ 2.13
TRNP1-201ENST00000522111 DPYSL3Q14195 570 aa28.36■■■□□ 2.13
TRNP1-201ENST00000522111 CCDC26Q8TAB7 109 aa28.36■■■□□ 2.13
TRNP1-201ENST00000522111 C2orf15Q8WU43 125 aaKnown RBP28.36■■■□□ 2.13
TRNP1-201ENST00000522111 TEKT4Q8WW24 435 aa28.36■■■□□ 2.13
TRNP1-201ENST00000522111 RAB21Q9UL25 225 aa28.36■■■□□ 2.13
TRNP1-201ENST00000522111 A0A1W2PQH9 124 aa28.35■■■□□ 2.13
TRNP1-201ENST00000522111 MDM4O15151 490 aa28.35■■■□□ 2.13
TRNP1-201ENST00000522111 PTPN7P35236 360 aa28.35■■■□□ 2.13
TRNP1-201ENST00000522111 PPP2R5EQ16537 467 aa28.35■■■□□ 2.13
TRNP1-201ENST00000522111 CYP1B1Q16678 543 aa28.35■■■□□ 2.13
TRNP1-201ENST00000522111 BNIPLQ7Z465 357 aa28.35■■■□□ 2.13
TRNP1-201ENST00000522111 SCD5Q86SK9 330 aa28.35■■■□□ 2.13
TRNP1-201ENST00000522111 GSPT2Q8IYD1 628 aaKnown RBP28.35■■■□□ 2.13
TRNP1-201ENST00000522111 CCDC105Q8IYK2 499 aa28.35■■■□□ 2.13
TRNP1-201ENST00000522111 SLC9A7Q96T83 725 aa28.35■■■□□ 2.13
TRNP1-201ENST00000522111 TRIM51Q9BSJ1 452 aa28.35■■■□□ 2.13
TRNP1-201ENST00000522111 NMUR1Q9HB89 426 aa28.35■■■□□ 2.13
TRNP1-201ENST00000522111 NUDT5Q9UKK9 219 aa28.35■■■□□ 2.13
TRNP1-201ENST00000522111 ZNF638Q14966 1978 aaKnown RBP28.35■■■□□ 2.13
TRNP1-201ENST00000522111 ATF6P18850 670 aa28.35■■■□□ 2.13
TRNP1-201ENST00000522111 CLCN6P51797 869 aa28.35■■■□□ 2.13
TRNP1-201ENST00000522111 KRT17Q04695 432 aa28.35■■■□□ 2.13
TRNP1-201ENST00000522111 BTBD8Q5XKL5 378 aa28.35■■■□□ 2.13
TRNP1-201ENST00000522111 WDR93Q6P2C0 686 aa28.35■■■□□ 2.13
TRNP1-201ENST00000522111 MAATS1Q7Z4T9 603 aa28.35■■■□□ 2.13
TRNP1-201ENST00000522111 RFX6Q8HWS3 928 aa28.35■■■□□ 2.13
TRNP1-201ENST00000522111 KLHL23Q8NBE8 558 aa28.35■■■□□ 2.13
TRNP1-201ENST00000522111 RAD9AQ99638 391 aa28.35■■■□□ 2.13
TRNP1-201ENST00000522111 EPB41L5Q9HCM4 733 aa28.35■■■□□ 2.13
TRNP1-201ENST00000522111 ARGLU1Q9NWB6 273 aaPredicted RBP28.35■■■□□ 2.13
TRNP1-201ENST00000522111 SAE1Q9UBE0 346 aaPredicted RBP28.35■■■□□ 2.13
TRNP1-201ENST00000522111 CDH23Q9H251 3354 aa28.34■■■□□ 2.13
TRNP1-201ENST00000522111 CST8O60676 142 aa28.34■■■□□ 2.13
TRNP1-201ENST00000522111 COILP38432 576 aaPredicted RBP28.34■■■□□ 2.13
TRNP1-201ENST00000522111 ARSEP51690 589 aa28.34■■■□□ 2.13
TRNP1-201ENST00000522111 TAC4Q86UU9 113 aa28.34■■■□□ 2.13
TRNP1-201ENST00000522111 DCLK3Q9C098 648 aa28.34■■■□□ 2.13
TRNP1-201ENST00000522111 FBXO44Q9H4M3 255 aa28.34■■■□□ 2.13
TRNP1-201ENST00000522111 PCDH18Q9HCL0 1135 aa28.34■■■□□ 2.13
TRNP1-201ENST00000522111 MRPL17Q9NRX2 175 aaKnown RBP28.34■■■□□ 2.13
TRNP1-201ENST00000522111 OSER1Q9NX31 292 aa28.34■■■□□ 2.13
TRNP1-201ENST00000522111 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.34■■■□□ 2.137e-8■■■□□ 15.8
TRNP1-201ENST00000522111 GMIPQ9P107 970 aa28.34■■■□□ 2.13
TRNP1-201ENST00000522111 SCML2Q9UQR0 700 aa28.34■■■□□ 2.13
TRNP1-201ENST00000522111 ENDOD1O94919 500 aa28.33■■■□□ 2.13
TRNP1-201ENST00000522111 TRADDQ15628 312 aa28.33■■■□□ 2.13
TRNP1-201ENST00000522111 PYROXD2Q8N2H3 581 aa28.33■■■□□ 2.13
TRNP1-201ENST00000522111 C12orf50Q8NA57 414 aaPredicted RBP28.33■■■□□ 2.13
TRNP1-201ENST00000522111 DQX1Q8TE96 717 aaKnown RBP28.33■■■□□ 2.13
TRNP1-201ENST00000522111 LRRC19Q9H756 370 aa28.33■■■□□ 2.13
TRNP1-201ENST00000522111 ABCC13Q9NSE7 274 aa28.33■■■□□ 2.13
TRNP1-201ENST00000522111 MAGED2Q9UNF1 606 aaPredicted RBP28.33■■■□□ 2.13
TRNP1-201ENST00000522111 PLXNA3P51805 1871 aa28.33■■■□□ 2.13
TRNP1-201ENST00000522111 PLXNA4Q9HCM2 1894 aa28.33■■■□□ 2.13
TRNP1-201ENST00000522111 CHD7Q9P2D1 2997 aa28.33■■■□□ 2.13
TRNP1-201ENST00000522111 CARNS1A5YM72 827 aa28.33■■■□□ 2.13
TRNP1-201ENST00000522111 SEC24AO95486 1093 aa28.33■■■□□ 2.13
TRNP1-201ENST00000522111 TAZQ16635 292 aa28.33■■■□□ 2.13
TRNP1-201ENST00000522111 MAP7D3Q8IWC1 876 aa28.33■■■□□ 2.13
TRNP1-201ENST00000522111 ZNF461Q8TAF7 563 aa28.33■■■□□ 2.13
TRNP1-201ENST00000522111 CLP1Q92989 425 aaKnown RBP28.33■■■□□ 2.13
TRNP1-201ENST00000522111 GREB1Q4ZG55 1949 aa28.32■■■□□ 2.12
TRNP1-201ENST00000522111 MYBL2P10244 700 aa28.32■■■□□ 2.12
TRNP1-201ENST00000522111 YWHAQP27348 245 aa28.32■■■□□ 2.12
TRNP1-201ENST00000522111 RPL10AP62906 217 aaKnown RBP28.32■■■□□ 2.12
TRNP1-201ENST00000522111 FBXO32Q969P5 355 aa28.32■■■□□ 2.12
TRNP1-201ENST00000522111 CCDC114Q96M63 670 aa28.32■■■□□ 2.12
TRNP1-201ENST00000522111 MAK16Q9BXY0 300 aaKnown RBP28.32■■■□□ 2.12
TRNP1-201ENST00000522111 TRIM31Q9BZY9 425 aa28.32■■■□□ 2.12
TRNP1-201ENST00000522111 CYP4F11Q9HBI6 524 aa28.32■■■□□ 2.12
TRNP1-201ENST00000522111 WDR6Q9NNW5 1121 aaKnown RBP28.32■■■□□ 2.12
TRNP1-201ENST00000522111 SLTMQ9NWH9 1034 aaKnown RBP eCLIP28.32■■■□□ 2.124e-7■□□□□ 10.3
TRNP1-201ENST00000522111 AFF4Q9UHB7 1163 aaKnown RBP28.32■■■□□ 2.12
TRNP1-201ENST00000522111 FZD10Q9ULW2 581 aa28.32■■■□□ 2.12
TRNP1-201ENST00000522111 L1CAMP32004 1257 aa28.31■■■□□ 2.12
TRNP1-201ENST00000522111 COL4A4P53420 1690 aaPredicted RBP28.31■■■□□ 2.12
TRNP1-201ENST00000522111 PDK2Q15119 407 aa28.31■■■□□ 2.12
TRNP1-201ENST00000522111 JAMLQ86YT9 394 aa28.31■■■□□ 2.12
TRNP1-201ENST00000522111 IFT81Q8WYA0 676 aa28.31■■■□□ 2.12
TRNP1-201ENST00000522111 KCTD15Q96SI1 283 aaPredicted RBP28.31■■■□□ 2.12
TRNP1-201ENST00000522111 TRIM62Q9BVG3 475 aa28.31■■■□□ 2.12
TRNP1-201ENST00000522111 PCYOX1Q9UHG3 505 aa28.31■■■□□ 2.12
TRNP1-201ENST00000522111 IL4RP24394 825 aa28.31■■■□□ 2.12
TRNP1-201ENST00000522111 FNTAP49354 379 aa28.31■■■□□ 2.12
TRNP1-201ENST00000522111 DHX34Q14147 1143 aaKnown RBP28.31■■■□□ 2.12
TRNP1-201ENST00000522111 MON1AQ86VX9 555 aa28.31■■■□□ 2.12
TRNP1-201ENST00000522111 SPATA17Q96L03 361 aa28.31■■■□□ 2.12
TRNP1-201ENST00000522111 ANLNQ9NQW6 1124 aa28.31■■■□□ 2.12
TRNP1-201ENST00000522111 RRN3Q9NYV6 651 aa28.31■■■□□ 2.12
TRNP1-201ENST00000522111 SFMBT1Q9UHJ3 866 aa28.31■■■□□ 2.12
TRNP1-201ENST00000522111 CEP290O15078 2479 aa28.31■■■□□ 2.12
TRNP1-201ENST00000522111 ABLIM3O94929 683 aa28.3■■■□□ 2.12
TRNP1-201ENST00000522111 SEC31AO94979 1220 aaKnown RBP28.3■■■□□ 2.12
TRNP1-201ENST00000522111 TAF10Q12962 218 aa28.3■■■□□ 2.12
TRNP1-201ENST00000522111 DPYSL2Q16555 572 aa28.3■■■□□ 2.12
TRNP1-201ENST00000522111 TRAF3IP1Q8TDR0 691 aaPredicted RBP28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms