RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 TRIM72Q6ZMU5 477 aa12.95□□□□□ -0.34
CLK4-208ENST00000520957 DEFB106AQ8N104 65 aa12.95□□□□□ -0.34
CLK4-208ENST00000520957 ZNF276Q8N554 614 aa12.95□□□□□ -0.34
CLK4-208ENST00000520957 OR8K1Q8NGG5 319 aa12.95□□□□□ -0.34
CLK4-208ENST00000520957 RNF139Q8WU17 664 aa12.95□□□□□ -0.34
CLK4-208ENST00000520957 E2F7Q96AV8 911 aa12.95□□□□□ -0.34
CLK4-208ENST00000520957 IQCDQ96DY2 449 aa12.95□□□□□ -0.34
CLK4-208ENST00000520957 FAM83CQ9BQN1 747 aa12.95□□□□□ -0.34
CLK4-208ENST00000520957 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.95□□□□□ -0.34
CLK4-208ENST00000520957 ADAM33Q9BZ11 813 aa12.95□□□□□ -0.34
CLK4-208ENST00000520957 BRD9Q9H8M2 597 aa12.95□□□□□ -0.34
CLK4-208ENST00000520957 OBP2AQ9NY56 170 aa12.95□□□□□ -0.34
CLK4-208ENST00000520957 GTSE1Q9NYZ3 720 aa12.95□□□□□ -0.34
CLK4-208ENST00000520957 DUSP12Q9UNI6 340 aa12.95□□□□□ -0.34
CLK4-208ENST00000520957 ZNF638Q14966 1978 aaKnown RBP12.94□□□□□ -0.34
CLK4-208ENST00000520957 A0A087X0T9 212 aa12.94□□□□□ -0.34
CLK4-208ENST00000520957 PI4K2BG5E9Z4 385 aa12.94□□□□□ -0.34
CLK4-208ENST00000520957 ZNF263O14978 683 aa12.94□□□□□ -0.34
CLK4-208ENST00000520957 MFAP3LO75121 409 aa12.94□□□□□ -0.34
CLK4-208ENST00000520957 SERPING1P05155 500 aa12.94□□□□□ -0.34
CLK4-208ENST00000520957 FAM228BP0C875 321 aa12.94□□□□□ -0.34
CLK4-208ENST00000520957 TFE3P19532 575 aaPredicted RBP12.94□□□□□ -0.34
CLK4-208ENST00000520957 EIF4A3P38919 411 aaKnown RBP12.94□□□□□ -0.34
CLK4-208ENST00000520957 NSFP46459 744 aaKnown RBP12.94□□□□□ -0.34
CLK4-208ENST00000520957 SOX9P48436 509 aa12.94□□□□□ -0.34
CLK4-208ENST00000520957 USP4Q13107 963 aa12.94□□□□□ -0.34
CLK4-208ENST00000520957 DCAF6Q58WW2 860 aa12.94□□□□□ -0.34
CLK4-208ENST00000520957 ACAD10Q6JQN1 1059 aa12.94□□□□□ -0.34
CLK4-208ENST00000520957 TRNP1Q6NT89 227 aa12.94□□□□□ -0.34
CLK4-208ENST00000520957 FMNL3Q8IVF7 1028 aa12.94□□□□□ -0.34
CLK4-208ENST00000520957 YAF2Q8IY57 180 aa12.94□□□□□ -0.34
CLK4-208ENST00000520957 TC2NQ8N9U0 490 aa12.94□□□□□ -0.34
CLK4-208ENST00000520957 DQX1Q8TE96 717 aaKnown RBP12.94□□□□□ -0.34
CLK4-208ENST00000520957 IPO4Q8TEX9 1081 aaKnown RBP12.94□□□□□ -0.34
CLK4-208ENST00000520957 EDAQ92838 391 aa12.94□□□□□ -0.34
CLK4-208ENST00000520957 NUCKS1Q9H1E3 243 aaKnown RBP12.94□□□□□ -0.34
CLK4-208ENST00000520957 EBF3Q9H4W6 596 aa12.94□□□□□ -0.34
CLK4-208ENST00000520957 POPDC2Q9HBU9 364 aa12.94□□□□□ -0.34
CLK4-208ENST00000520957 HPS4Q9NQG7 708 aa12.94□□□□□ -0.34
CLK4-208ENST00000520957 ABHD10Q9NUJ1 306 aa12.94□□□□□ -0.34
CLK4-208ENST00000520957 ADAM22Q9P0K1 906 aa12.94□□□□□ -0.34
CLK4-208ENST00000520957 CALCOCO1Q9P1Z2 691 aa12.94□□□□□ -0.34
CLK4-208ENST00000520957 KRBA1A5PL33 1030 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 AKR1B15C9JRZ8 316 aaPredicted RBP12.93□□□□□ -0.34
CLK4-208ENST00000520957 DLL1O00548 723 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 CHADO15335 359 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 STC2O76061 302 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 PDGFBP01127 241 aaPredicted RBP12.93□□□□□ -0.34
CLK4-208ENST00000520957 FTLP02792 175 aaPredicted RBP12.93□□□□□ -0.34
CLK4-208ENST00000520957 CD72P21854 359 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 TRIM14Q14142 442 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 ARID5BQ14865 1188 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 FAM102AQ5T9C2 384 aaPredicted RBP12.93□□□□□ -0.34
CLK4-208ENST00000520957 MON1BQ7L1V2 547 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 SLC26A9Q7LBE3 791 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 PHF13Q86YI8 300 aaPredicted RBP12.93□□□□□ -0.34
CLK4-208ENST00000520957 BBS7Q8IWZ6 715 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 MCOLN2Q8IZK6 566 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 ADGRG2Q8IZP9 1017 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 EMC1Q8N766 993 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 DEPDC1BQ8WUY9 529 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 P2RY11Q96G91 374 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 SLC2A4RGQ9NR83 387 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 HEBP1Q9NRV9 189 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 DUS2Q9NX74 493 aaKnown RBP12.93□□□□□ -0.34
CLK4-208ENST00000520957 TMEM59LQ9UK28 342 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 CA14Q9ULX7 337 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 SHISA7A6NL88 538 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 CAPN9O14815 690 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 SART1O43290 800 aaKnown RBP12.93□□□□□ -0.34
CLK4-208ENST00000520957 RRM1P23921 792 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 FLT3P36888 993 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 SLC44A4Q53GD3 710 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 RAB6CQ53S08 254 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 EFHC1Q5JVL4 640 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 NAIF1Q69YI7 327 aaPredicted RBP12.93□□□□□ -0.34
CLK4-208ENST00000520957 CC2D1AQ6P1N0 951 aaPredicted RBP12.93□□□□□ -0.34
CLK4-208ENST00000520957 TAC4Q86UU9 113 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 SPC24Q8NBT2 197 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 JOSD2Q8TAC2 188 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 OSCP1Q8WVF1 389 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 GOLGA1Q92805 767 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 SLC2A13Q96QE2 648 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 RAB6CQ9H0N0 254 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 KIF9Q9HAQ2 790 aa12.93□□□□□ -0.34
CLK4-208ENST00000520957 THG1LQ9NWX6 298 aaKnown RBP12.93□□□□□ -0.34
CLK4-208ENST00000520957 BZW2Q9Y6E2 419 aaKnown RBP12.93□□□□□ -0.34
CLK4-208ENST00000520957 PATJQ8NI35 1801 aa12.92□□□□□ -0.34
CLK4-208ENST00000520957 ANAPC1Q9H1A4 1944 aa12.92□□□□□ -0.34
CLK4-208ENST00000520957 SYNJ2BP-COX16A0A087WUM0 186 aa12.92□□□□□ -0.34
CLK4-208ENST00000520957 ATMINO43313 823 aaPredicted RBP12.92□□□□□ -0.34
CLK4-208ENST00000520957 HSF2BPO75031 334 aa12.92□□□□□ -0.34
CLK4-208ENST00000520957 TCF3P15923 654 aa12.92□□□□□ -0.34
CLK4-208ENST00000520957 SNX16P57768 344 aa12.92□□□□□ -0.34
CLK4-208ENST00000520957 COG7P83436 770 aa12.92□□□□□ -0.34
CLK4-208ENST00000520957 GFPT1Q06210 699 aaPredicted RBP12.92□□□□□ -0.34
CLK4-208ENST00000520957 ASTE1Q2TB18 679 aaPredicted RBP12.92□□□□□ -0.34
CLK4-208ENST00000520957 EML3Q32P44 896 aa12.92□□□□□ -0.34
CLK4-208ENST00000520957 ARHGAP29Q52LW3 1261 aa12.92□□□□□ -0.34
CLK4-208ENST00000520957 MSANTD2Q6P1R3 559 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms