RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 FYNP06241 537 aa16.03■□□□□ 0.16
LSM1-203ENST00000520755 CKMP06732 381 aa16.03■□□□□ 0.16
LSM1-203ENST00000520755 SCNN1AP37088 669 aa16.03■□□□□ 0.16
LSM1-203ENST00000520755 AVPR1AP37288 418 aa16.03■□□□□ 0.16
LSM1-203ENST00000520755 YWHAGP61981 247 aaKnown RBP eCLIP16.03■□□□□ 0.16
LSM1-203ENST00000520755 GPC5P78333 572 aa16.03■□□□□ 0.16
LSM1-203ENST00000520755 MAMLD1Q13495 774 aa16.03■□□□□ 0.16
LSM1-203ENST00000520755 HECTD3Q5T447 861 aa16.03■□□□□ 0.16
LSM1-203ENST00000520755 DNAJC24Q6P3W2 148 aa16.03■□□□□ 0.16
LSM1-203ENST00000520755 PARM1Q6UWI2 310 aa16.03■□□□□ 0.16
LSM1-203ENST00000520755 KIAA1328Q86T90 577 aa16.03■□□□□ 0.16
LSM1-203ENST00000520755 ZDHHC17Q8IUH5 632 aa16.03■□□□□ 0.16
LSM1-203ENST00000520755 ARID3BQ8IVW6 561 aaPredicted RBP16.03■□□□□ 0.16
LSM1-203ENST00000520755 CMTM8Q8IZV2 173 aa16.03■□□□□ 0.16
LSM1-203ENST00000520755 ARL14EPQ8N8R7 260 aaPredicted RBP16.03■□□□□ 0.16
LSM1-203ENST00000520755 CTNNBL1Q8WYA6 563 aaPredicted RBP16.03■□□□□ 0.16
LSM1-203ENST00000520755 RFFLQ8WZ73 363 aa16.03■□□□□ 0.16
LSM1-203ENST00000520755 IRGQQ8WZA9 623 aa16.03■□□□□ 0.16
LSM1-203ENST00000520755 SMARCD2Q92925 531 aa16.03■□□□□ 0.16
LSM1-203ENST00000520755 ASB16Q96NS5 453 aa16.03■□□□□ 0.16
LSM1-203ENST00000520755 SLC22A12Q96S37 553 aa16.03■□□□□ 0.16
LSM1-203ENST00000520755 CYP2S1Q96SQ9 504 aa16.03■□□□□ 0.16
LSM1-203ENST00000520755 NACA2Q9H009 215 aa16.03■□□□□ 0.16
LSM1-203ENST00000520755 SMG9Q9H0W8 520 aaKnown RBP16.03■□□□□ 0.16
LSM1-203ENST00000520755 CCSER2Q9H7U1 834 aa16.03■□□□□ 0.16
LSM1-203ENST00000520755 OSGEPQ9NPF4 335 aa16.03■□□□□ 0.16
LSM1-203ENST00000520755 WDR35Q9P2L0 1181 aa16.03■□□□□ 0.16
LSM1-203ENST00000520755 ZMYM5Q9UJ78 669 aa16.03■□□□□ 0.16
LSM1-203ENST00000520755 TMEM59LQ9UK28 342 aa16.03■□□□□ 0.16
LSM1-203ENST00000520755 DUSP10Q9Y6W6 482 aa16.03■□□□□ 0.16
LSM1-203ENST00000520755 DAB1O75553 588 aa16.02■□□□□ 0.16
LSM1-203ENST00000520755 LTFP02788 710 aa16.02■□□□□ 0.16
LSM1-203ENST00000520755 ASGR2P07307 311 aa16.02■□□□□ 0.16
LSM1-203ENST00000520755 RARGP13631 454 aa16.02■□□□□ 0.16
LSM1-203ENST00000520755 HDCP19113 662 aa16.02■□□□□ 0.16
LSM1-203ENST00000520755 FLT3P36888 993 aa16.02■□□□□ 0.16
LSM1-203ENST00000520755 VIPR2P41587 438 aa16.02■□□□□ 0.16
LSM1-203ENST00000520755 PSEN1P49768 467 aa16.02■□□□□ 0.16
LSM1-203ENST00000520755 RPL7AP62424 266 aaKnown RBP16.02■□□□□ 0.16
LSM1-203ENST00000520755 OGDHQ02218 1023 aa16.02■□□□□ 0.16
LSM1-203ENST00000520755 ZNF252P-AS1Q0IIN9 211 aa16.02■□□□□ 0.16
LSM1-203ENST00000520755 TCEAL1Q15170 157 aa16.02■□□□□ 0.16
LSM1-203ENST00000520755 OTUD1Q5VV17 481 aaPredicted RBP16.02■□□□□ 0.16
LSM1-203ENST00000520755 SNX30Q5VWJ9 437 aa16.02■□□□□ 0.16
LSM1-203ENST00000520755 MTSS1LQ765P7 747 aa16.02■□□□□ 0.16
LSM1-203ENST00000520755 REXO1L1PQ8IX06 675 aa16.02■□□□□ 0.16
LSM1-203ENST00000520755 GJD3Q8N144 294 aa16.02■□□□□ 0.16
LSM1-203ENST00000520755 ARHGAP18Q8N392 663 aa16.02■□□□□ 0.16
LSM1-203ENST00000520755 C17orf53Q8N3J3 647 aaPredicted RBP16.02■□□□□ 0.16
LSM1-203ENST00000520755 EMC1Q8N766 993 aa16.02■□□□□ 0.16
LSM1-203ENST00000520755 TTC16Q8NEE8 873 aa16.02■□□□□ 0.16
LSM1-203ENST00000520755 RSAD2Q8WXG1 361 aa16.02■□□□□ 0.16
LSM1-203ENST00000520755 FGF14Q92915 247 aa16.02■□□□□ 0.16
LSM1-203ENST00000520755 MCEEQ96PE7 176 aa16.02■□□□□ 0.16
LSM1-203ENST00000520755 UHRF1Q96T88 793 aaPredicted RBP16.02■□□□□ 0.16
LSM1-203ENST00000520755 KXD1Q9BQD3 176 aa16.02■□□□□ 0.16
LSM1-203ENST00000520755 NUP85Q9BW27 656 aa16.02■□□□□ 0.16
LSM1-203ENST00000520755 ADAM33Q9BZ11 813 aa16.02■□□□□ 0.16
LSM1-203ENST00000520755 ASNSD1Q9NWL6 643 aa16.02■□□□□ 0.16
LSM1-203ENST00000520755 NUDT5Q9UKK9 219 aa16.02■□□□□ 0.16
LSM1-203ENST00000520755 NUMBLQ9Y6R0 609 aa16.02■□□□□ 0.16
LSM1-203ENST00000520755 SIGLEC16A6NMB1 481 aa16.01■□□□□ 0.15
LSM1-203ENST00000520755 SOBPA7XYQ1 873 aa16.01■□□□□ 0.15
LSM1-203ENST00000520755 BTNL10A8MVZ5 291 aa16.01■□□□□ 0.15
LSM1-203ENST00000520755 COCHO43405 550 aa16.01■□□□□ 0.15
LSM1-203ENST00000520755 TLR5O60602 858 aa16.01■□□□□ 0.15
LSM1-203ENST00000520755 MTA2O94776 668 aa16.01■□□□□ 0.15
LSM1-203ENST00000520755 PRAMEF12O95522 483 aa16.01■□□□□ 0.15
LSM1-203ENST00000520755 OAS1P00973 400 aaKnown RBP16.01■□□□□ 0.15
LSM1-203ENST00000520755 RALAP11233 206 aa16.01■□□□□ 0.15
LSM1-203ENST00000520755 FCARP24071 287 aa16.01■□□□□ 0.15
LSM1-203ENST00000520755 SNX16P57768 344 aa16.01■□□□□ 0.15
LSM1-203ENST00000520755 PITX1P78337 314 aaPredicted RBP16.01■□□□□ 0.15
LSM1-203ENST00000520755 HTR4Q13639 388 aa16.01■□□□□ 0.15
LSM1-203ENST00000520755 BTBD8Q5XKL5 378 aa16.01■□□□□ 0.15
LSM1-203ENST00000520755 TANGO2Q6ICL3 276 aa16.01■□□□□ 0.15
LSM1-203ENST00000520755 ZNF662Q6ZS27 426 aa16.01■□□□□ 0.15
LSM1-203ENST00000520755 ZNF564Q8TBZ8 553 aaPredicted RBP16.01■□□□□ 0.15
LSM1-203ENST00000520755 KIAA1524Q8TCG1 905 aa16.01■□□□□ 0.15
LSM1-203ENST00000520755 GOLGA1Q92805 767 aa16.01■□□□□ 0.15
LSM1-203ENST00000520755 SLC2A13Q96QE2 648 aa16.01■□□□□ 0.15
LSM1-203ENST00000520755 SELENOOQ9BVL4 669 aa16.01■□□□□ 0.15
LSM1-203ENST00000520755 RNF38Q9H0F5 515 aa16.01■□□□□ 0.15
LSM1-203ENST00000520755 KCNK12Q9HB15 430 aa16.01■□□□□ 0.15
LSM1-203ENST00000520755 ZFP14Q9HCL3 533 aa16.01■□□□□ 0.15
LSM1-203ENST00000520755 CD320Q9NPF0 282 aa16.01■□□□□ 0.15
LSM1-203ENST00000520755 LUC7LQ9NQ29 371 aaKnown RBP16.01■□□□□ 0.15
LSM1-203ENST00000520755 PARVAQ9NVD7 372 aa16.01■□□□□ 0.15
LSM1-203ENST00000520755 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.01■□□□□ 0.15
LSM1-203ENST00000520755 CLIC5Q9NZA1 410 aa16.01■□□□□ 0.15
LSM1-203ENST00000520755 ZKSCAN5Q9Y2L8 839 aa16.01■□□□□ 0.15
LSM1-203ENST00000520755 SCINQ9Y6U3 715 aa16.01■□□□□ 0.15
LSM1-203ENST00000520755 A0A0A6YYK5 440 aaPredicted RBP16■□□□□ 0.15
LSM1-203ENST00000520755 C2CD4BA6NLJ0 364 aa16■□□□□ 0.15
LSM1-203ENST00000520755 ANHXE9PGG2 379 aa16■□□□□ 0.15
LSM1-203ENST00000520755 DPYSL4O14531 572 aa16■□□□□ 0.15
LSM1-203ENST00000520755 MDM4O15151 490 aa16■□□□□ 0.15
LSM1-203ENST00000520755 SART1O43290 800 aaKnown RBP16■□□□□ 0.15
LSM1-203ENST00000520755 HSF2BPO75031 334 aa16■□□□□ 0.15
LSM1-203ENST00000520755 TBX18O95935 607 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms