RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 CC2D1AQ6P1N0 951 aaPredicted RBP9.14□□□□□ -0.95
PABPC1-213ENST00000519848 C1orf228Q6PIY5 440 aa9.14□□□□□ -0.95
PABPC1-213ENST00000519848 TTC30AQ86WT1 665 aa9.14□□□□□ -0.95
PABPC1-213ENST00000519848 ZC3H3Q8IXZ2 948 aaKnown RBP9.14□□□□□ -0.95
PABPC1-213ENST00000519848 CEP57L1Q8IYX8 460 aa9.14□□□□□ -0.95
PABPC1-213ENST00000519848 UBR7Q8N806 425 aa9.14□□□□□ -0.95
PABPC1-213ENST00000519848 ENGASEQ8NFI3 743 aa9.14□□□□□ -0.95
PABPC1-213ENST00000519848 OR2I1PQ8NGU4 316 aa9.14□□□□□ -0.95
PABPC1-213ENST00000519848 KAT5Q92993 513 aa9.14□□□□□ -0.95
PABPC1-213ENST00000519848 SMARCD1Q96GM5 515 aa9.14□□□□□ -0.95
PABPC1-213ENST00000519848 MRGPRX2Q96LB1 330 aa9.14□□□□□ -0.95
PABPC1-213ENST00000519848 LRRC27Q9C0I9 530 aa9.14□□□□□ -0.95
PABPC1-213ENST00000519848 TMEM74BQ9NUR3 256 aa9.14□□□□□ -0.95
PABPC1-213ENST00000519848 SLC8A2Q9UPR5 921 aa9.14□□□□□ -0.95
PABPC1-213ENST00000519848 SLCO1B1Q9Y6L6 691 aa9.14□□□□□ -0.95
PABPC1-213ENST00000519848 CKAP5Q14008 2032 aa9.14□□□□□ -0.95
PABPC1-213ENST00000519848 CCDC163A0A0D9SF12 145 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 BCLAF3A2AJT9 711 aaKnown RBP9.13□□□□□ -0.95
PABPC1-213ENST00000519848 WASH3PC4AMC7 463 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 CDX4O14627 284 aaPredicted RBP9.13□□□□□ -0.95
PABPC1-213ENST00000519848 HOXC11O43248 304 aaPredicted RBP9.13□□□□□ -0.95
PABPC1-213ENST00000519848 TLR5O60602 858 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 PHACTR2O75167 634 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 NFATC1O95644 943 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 APBB3O95704 486 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 FAM163BP0C2L3 166 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 ZNF806P0C7X5 589 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 CCDC192P0DO97 292 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 GABRG2P18507 467 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 P2RY2P41231 377 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 SYKP43405 635 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 GSK3AP49840 483 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 DGKEP52429 567 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 RAD23BP54727 409 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 MAPRE1Q15691 268 aaKnown RBP9.13□□□□□ -0.95
PABPC1-213ENST00000519848 NFIL3Q16649 462 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 MAP7D1Q3KQU3 841 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 ZNF394Q53GI3 561 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 STPG1Q5TH74 334 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 ARMCX6Q7L4S7 300 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 FMR1NBQ8N0W7 255 aaPredicted RBP9.13□□□□□ -0.95
PABPC1-213ENST00000519848 SLC4A11Q8NBS3 891 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 RBBP8NLQ8NC74 664 aaPredicted RBP9.13□□□□□ -0.95
PABPC1-213ENST00000519848 NETO1Q8TDF5 533 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 BHMTQ93088 406 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 MYEOVQ96EZ4 313 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 CNOT6LQ96LI5 555 aaKnown RBP9.13□□□□□ -0.95
PABPC1-213ENST00000519848 RTKNQ9BST9 563 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 MED10Q9BTT4 135 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 CYLDQ9NQC7 956 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 PRDM9Q9NQV7 894 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 PLK2Q9NYY3 685 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 EBF1Q9UH73 591 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 ZMYM5Q9UJ78 669 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 WASF3Q9UPY6 502 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 RAD54BQ9Y620 910 aa9.13□□□□□ -0.95
PABPC1-213ENST00000519848 MAP1BP46821 2468 aaKnown RBP9.12□□□□□ -0.95
PABPC1-213ENST00000519848 A0A0A0MRY4 1105 aa9.12□□□□□ -0.95
PABPC1-213ENST00000519848 E2F8A0AVK6 867 aa9.12□□□□□ -0.95
PABPC1-213ENST00000519848 H3BM21 787 aa9.12□□□□□ -0.95
PABPC1-213ENST00000519848 LRP3O75074 770 aa9.12□□□□□ -0.95
PABPC1-213ENST00000519848 STC2O76061 302 aa9.12□□□□□ -0.95
PABPC1-213ENST00000519848 ZNF202O95125 648 aa9.12□□□□□ -0.95
PABPC1-213ENST00000519848 CISD3P0C7P0 127 aa9.12□□□□□ -0.95
PABPC1-213ENST00000519848 SPINK2P20155 84 aa9.12□□□□□ -0.95
PABPC1-213ENST00000519848 PMLP29590 882 aa9.12□□□□□ -0.95
PABPC1-213ENST00000519848 CNR2P34972 360 aa9.12□□□□□ -0.95
PABPC1-213ENST00000519848 PRCPP42785 496 aa9.12□□□□□ -0.95
PABPC1-213ENST00000519848 SGSHP51688 502 aa9.12□□□□□ -0.95
PABPC1-213ENST00000519848 N4BP2L1Q5TBK1 243 aaPredicted RBP9.12□□□□□ -0.95
PABPC1-213ENST00000519848 ATL3Q6DD88 541 aa9.12□□□□□ -0.95
PABPC1-213ENST00000519848 CACNA2D4Q7Z3S7 1137 aa9.12□□□□□ -0.95
PABPC1-213ENST00000519848 FAM186BQ8IYM0 893 aa9.12□□□□□ -0.95
PABPC1-213ENST00000519848 GUF1Q8N442 669 aaKnown RBP9.12□□□□□ -0.95
PABPC1-213ENST00000519848 DEFB119Q8N690 84 aa9.12□□□□□ -0.95
PABPC1-213ENST00000519848 TERB1Q8NA31 727 aa9.12□□□□□ -0.95
PABPC1-213ENST00000519848 TSTD1Q8NFU3 115 aa9.12□□□□□ -0.95
PABPC1-213ENST00000519848 TFAP2BQ92481 460 aa9.12□□□□□ -0.95
PABPC1-213ENST00000519848 CEP295NLQ96MC4 621 aa9.12□□□□□ -0.95
PABPC1-213ENST00000519848 SLITRK1Q96PX8 696 aa9.12□□□□□ -0.95
PABPC1-213ENST00000519848 HNRNPABQ99729 332 aaKnown RBP9.12□□□□□ -0.95
PABPC1-213ENST00000519848 NIF3L1Q9GZT8 377 aa9.12□□□□□ -0.95
PABPC1-213ENST00000519848 ARHGEF4Q9NR80 690 aa9.12□□□□□ -0.95
PABPC1-213ENST00000519848 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.12□□□□□ -0.95
PABPC1-213ENST00000519848 CGNQ9P2M7 1197 aaKnown RBP9.12□□□□□ -0.95
PABPC1-213ENST00000519848 RALYQ9UKM9 306 aaKnown RBP9.12□□□□□ -0.95
PABPC1-213ENST00000519848 RAB23Q9ULC3 237 aa9.12□□□□□ -0.95
PABPC1-213ENST00000519848 GTF3C3Q9Y5Q9 886 aa9.12□□□□□ -0.95
PABPC1-213ENST00000519848 USP24Q9UPU5 2620 aa9.12□□□□□ -0.95
PABPC1-213ENST00000519848 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.11□□□□□ -0.95
PABPC1-213ENST00000519848 A0A1W2PQ27 194 aa9.11□□□□□ -0.95
PABPC1-213ENST00000519848 A0A1W2PQ64 194 aa9.11□□□□□ -0.95
PABPC1-213ENST00000519848 A0A1W2PQD8 194 aa9.11□□□□□ -0.95
PABPC1-213ENST00000519848 TCRBV21S2A2A0A5A6 115 aa9.11□□□□□ -0.95
PABPC1-213ENST00000519848 PRR5-ARHGAP8B1AHC4 643 aa9.11□□□□□ -0.95
PABPC1-213ENST00000519848 GFRA2O00451 464 aa9.11□□□□□ -0.95
PABPC1-213ENST00000519848 CACNG3O60359 315 aa9.11□□□□□ -0.95
PABPC1-213ENST00000519848 RTN3O95197 1032 aaPredicted RBP9.11□□□□□ -0.95
PABPC1-213ENST00000519848 FAM200BP0CF97 657 aa9.11□□□□□ -0.95
PABPC1-213ENST00000519848 PFKLP17858 780 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms