RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 SMG5Q9UPR3 1016 aaKnown RBP9.81□□□□□ -0.84
HDAC3-215ENST00000519474 PIEZO1Q92508 2521 aa9.81□□□□□ -0.84
HDAC3-215ENST00000519474 HELZP42694 1942 aaKnown RBP9.8□□□□□ -0.84
HDAC3-215ENST00000519474 YJEFN3A6XGL0 299 aa9.8□□□□□ -0.84
HDAC3-215ENST00000519474 E7ENQ6 273 aa9.8□□□□□ -0.84
HDAC3-215ENST00000519474 TULP3O75386 442 aa9.8□□□□□ -0.84
HDAC3-215ENST00000519474 ADH1CP00326 375 aa9.8□□□□□ -0.84
HDAC3-215ENST00000519474 APODP05090 189 aa9.8□□□□□ -0.84
HDAC3-215ENST00000519474 HNRNPLP14866 589 aaKnown RBP eCLIP9.8□□□□□ -0.84
HDAC3-215ENST00000519474 TIE1P35590 1138 aa9.8□□□□□ -0.84
HDAC3-215ENST00000519474 SEC13P55735 322 aa9.8□□□□□ -0.84
HDAC3-215ENST00000519474 SLC8A3P57103 927 aa9.8□□□□□ -0.84
HDAC3-215ENST00000519474 APBA1Q02410 837 aa9.8□□□□□ -0.84
HDAC3-215ENST00000519474 EFEMP1Q12805 493 aa9.8□□□□□ -0.84
HDAC3-215ENST00000519474 ANO4Q32M45 955 aa9.8□□□□□ -0.84
HDAC3-215ENST00000519474 BSPRYQ5W0U4 402 aa9.8□□□□□ -0.84
HDAC3-215ENST00000519474 BTBD8Q5XKL5 378 aa9.8□□□□□ -0.84
HDAC3-215ENST00000519474 DPY19L2P1Q6NXN4 242 aa9.8□□□□□ -0.84
HDAC3-215ENST00000519474 GJB7Q6PEY0 223 aa9.8□□□□□ -0.84
HDAC3-215ENST00000519474 TMEM92Q6UXU6 159 aa9.8□□□□□ -0.84
HDAC3-215ENST00000519474 MIB1Q86YT6 1006 aa9.8□□□□□ -0.84
HDAC3-215ENST00000519474 SCML4Q8N228 414 aa9.8□□□□□ -0.84
HDAC3-215ENST00000519474 ARHGAP18Q8N392 663 aa9.8□□□□□ -0.84
HDAC3-215ENST00000519474 IL17RCQ8NAC3 791 aa9.8□□□□□ -0.84
HDAC3-215ENST00000519474 RBBP8NLQ8NC74 664 aaPredicted RBP9.8□□□□□ -0.84
HDAC3-215ENST00000519474 CNOT6LQ96LI5 555 aaKnown RBP9.8□□□□□ -0.84
HDAC3-215ENST00000519474 HHIPQ96QV1 700 aa9.8□□□□□ -0.84
HDAC3-215ENST00000519474 CRACR2AQ9BSW2 395 aa9.8□□□□□ -0.84
HDAC3-215ENST00000519474 LRRC4Q9HBW1 653 aa9.8□□□□□ -0.84
HDAC3-215ENST00000519474 ARHGEF4Q9NR80 690 aa9.8□□□□□ -0.84
HDAC3-215ENST00000519474 MARK1Q9P0L2 795 aa9.8□□□□□ -0.84
HDAC3-215ENST00000519474 DEC1Q9P2X7 70 aa9.8□□□□□ -0.84
HDAC3-215ENST00000519474 EBF1Q9UH73 591 aa9.8□□□□□ -0.84
HDAC3-215ENST00000519474 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.8□□□□□ -0.84
HDAC3-215ENST00000519474 ZFHX2Q9C0A1 2572 aaPredicted RBP9.8□□□□□ -0.84
HDAC3-215ENST00000519474 SLC12A8A0AV02 714 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 TBC1D3BA6NDS4 549 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 SGK1O00141 431 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 PIK3R2O00459 728 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 AXIN1O15169 862 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 HMBSP08397 361 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 SETSIPP0DME0 302 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 LCP1P13796 627 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 PON1P27169 355 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 ERCC5P28715 1186 aaPredicted RBP9.79□□□□□ -0.84
HDAC3-215ENST00000519474 GPD2P43304 727 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 RPL34P49207 117 aaKnown RBP9.79□□□□□ -0.84
HDAC3-215ENST00000519474 RGS7P49802 495 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 DAOAP59103 153 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 GOLGA8FQ08AF8 430 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 GOLGA8DPQ0D2H9 430 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 ADIGQ0VDE8 80 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 KCNMA1Q12791 1236 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 STILQ15468 1287 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 TRIP4Q15650 581 aaPredicted RBP9.79□□□□□ -0.84
HDAC3-215ENST00000519474 CRY1Q16526 586 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 DPCR1Q3MIW9 517 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 LAIR1Q6GTX8 287 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 PRR23BQ6ZRT6 265 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 TADA2BQ86TJ2 420 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 FAM160A2Q8N612 972 aaPredicted RBP9.79□□□□□ -0.84
HDAC3-215ENST00000519474 ALLCQ8N6M5 410 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 CCDC26Q8TAB7 109 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 GAB3Q8WWW8 586 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 ZNF606Q8WXB4 792 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 HSFY1Q96LI6 401 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 CDK5RAP1Q96SZ6 601 aaKnown RBP9.79□□□□□ -0.84
HDAC3-215ENST00000519474 BBS2Q9BXC9 721 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 PARD6AQ9NPB6 346 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 SIX2Q9NPC8 291 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 ZDHHC4Q9NPG8 344 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 ACP6Q9NPH0 428 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 CNGB3Q9NQW8 809 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 ABCC13Q9NSE7 274 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 PLK2Q9NYY3 685 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 MARCH2Q9P0N8 246 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 WDR35Q9P2L0 1181 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 NCDNQ9UBB6 729 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 SFMBT1Q9UHJ3 866 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 RASAL2Q9UJF2 1139 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 LSM7Q9UK45 103 aaKnown RBP9.79□□□□□ -0.84
HDAC3-215ENST00000519474 AGO1Q9UL18 857 aaKnown RBP9.79□□□□□ -0.84
HDAC3-215ENST00000519474 MMP17Q9ULZ9 603 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 ZNF510Q9Y2H8 683 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 STARD13Q9Y3M8 1113 aa9.79□□□□□ -0.84
HDAC3-215ENST00000519474 RIF1Q5UIP0 2472 aaKnown RBP9.78□□□□□ -0.84
HDAC3-215ENST00000519474 MYO18AQ92614 2054 aaKnown RBP9.78□□□□□ -0.84
HDAC3-215ENST00000519474 FAM186AA6NE01 2351 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 BECN2A8MW95 431 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.78□□□□□ -0.84
HDAC3-215ENST00000519474 PRRT4C9JH25 899 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 NEDD8-MDP1E9PL57 170 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 ADAM23O75077 832 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 KLF8O95600 359 aaPredicted RBP9.78□□□□□ -0.84
HDAC3-215ENST00000519474 FYNP06241 537 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 RETP07949 1114 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 TYRP14679 529 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 CHKAP35790 457 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 MFAP3P55082 362 aa9.78□□□□□ -0.84
HDAC3-215ENST00000519474 KDSRQ06136 332 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms