RNA–Protein interactions for RNA: ENST00000519177.5

SNTB1-203, Transcript of syntrophin beta 1, humanhuman

TSL 1 (best)

Gene SNTB1, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB1-203ENST00000519177 CDKL3Q8IVW4 592 aaPredicted RBP19.39■□□□□ 0.7
SNTB1-203ENST00000519177 C3orf58Q8NDZ4 430 aa19.39■□□□□ 0.7
SNTB1-203ENST00000519177 FAM149B1Q96BN6 582 aa19.39■□□□□ 0.7
SNTB1-203ENST00000519177 CSPG4P5Q96PW8 444 aa19.39■□□□□ 0.7
SNTB1-203ENST00000519177 PRDM16Q9HAZ2 1276 aa19.39■□□□□ 0.7
SNTB1-203ENST00000519177 RCOR3Q9P2K3 495 aaPredicted RBP19.39■□□□□ 0.7
SNTB1-203ENST00000519177 DDX20Q9UHI6 824 aaKnown RBP19.39■□□□□ 0.7
SNTB1-203ENST00000519177 CDH9Q9ULB4 789 aa19.39■□□□□ 0.7
SNTB1-203ENST00000519177 FZD10Q9ULW2 581 aa19.39■□□□□ 0.7
SNTB1-203ENST00000519177 CASP8AP2Q9UKL3 1982 aa19.39■□□□□ 0.69
SNTB1-203ENST00000519177 BANF1O75531 89 aa19.39■□□□□ 0.69
SNTB1-203ENST00000519177 FBXO21O94952 628 aa19.39■□□□□ 0.69
SNTB1-203ENST00000519177 UPP1Q16831 310 aa19.39■□□□□ 0.69
SNTB1-203ENST00000519177 C4orf22Q6V702 233 aa19.39■□□□□ 0.69
SNTB1-203ENST00000519177 CPLX4Q7Z7G2 160 aa19.39■□□□□ 0.69
SNTB1-203ENST00000519177 SIX6OS1Q8N1H7 587 aa19.39■□□□□ 0.69
SNTB1-203ENST00000519177 TAB3Q8N5C8 712 aaPredicted RBP19.39■□□□□ 0.69
SNTB1-203ENST00000519177 NDRG1Q92597 394 aaKnown RBP19.39■□□□□ 0.69
SNTB1-203ENST00000519177 SLC2A13Q96QE2 648 aa19.39■□□□□ 0.69
SNTB1-203ENST00000519177 NPY6RQ99463 290 aa19.39■□□□□ 0.69
SNTB1-203ENST00000519177 OSBPL7Q9BZF2 842 aa19.39■□□□□ 0.69
SNTB1-203ENST00000519177 KRT82Q9NSB4 513 aa19.39■□□□□ 0.69
SNTB1-203ENST00000519177 MAP3K7CLP57077 242 aa19.38■□□□□ 0.69
SNTB1-203ENST00000519177 TMED2Q15363 201 aa19.38■□□□□ 0.69
SNTB1-203ENST00000519177 DCAF6Q58WW2 860 aa19.38■□□□□ 0.69
SNTB1-203ENST00000519177 EFHC2Q5JST6 749 aa19.38■□□□□ 0.69
SNTB1-203ENST00000519177 OTUD1Q5VV17 481 aaPredicted RBP19.38■□□□□ 0.69
SNTB1-203ENST00000519177 WDR83Q9BRX9 315 aaKnown RBP19.38■□□□□ 0.69
SNTB1-203ENST00000519177 FRMD8Q9BZ67 464 aaPredicted RBP19.38■□□□□ 0.69
SNTB1-203ENST00000519177 RABGEF1Q9UJ41 708 aa19.38■□□□□ 0.69
SNTB1-203ENST00000519177 STAP1Q9ULZ2 295 aa19.38■□□□□ 0.69
SNTB1-203ENST00000519177 PTCH2Q9Y6C5 1203 aa19.38■□□□□ 0.69
SNTB1-203ENST00000519177 USP3Q9Y6I4 520 aa19.38■□□□□ 0.69
SNTB1-203ENST00000519177 A0A0U1RQF3 1178 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 FOXO6A8MYZ6 492 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 POC1B-GALNT4F8VUJ3 575 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 MYO1CO00159 1063 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 MGEA5O60502 916 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 GHRP10912 638 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 PRKAR2AP13861 404 aaKnown RBP19.37■□□□□ 0.69
SNTB1-203ENST00000519177 MAGEA6P43360 314 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 NDUFV1P49821 464 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 TKTL1P51854 596 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 PTK7Q13308 1070 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 SLC45A4Q5BKX6 768 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 FAM35AQ86V20 835 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 TRABD2AQ86V40 505 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 SRRM1Q8IYB3 904 aaKnown RBP19.37■□□□□ 0.69
SNTB1-203ENST00000519177 PCSK9Q8NBP7 692 aaKnown RBP19.37■□□□□ 0.69
SNTB1-203ENST00000519177 FBXO36Q8NEA4 188 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 KCNK9Q9NPC2 374 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 RAB6BQ9NRW1 208 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 MYBPHLA2RUH7 354 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 CASTOR2A6NHX0 329 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 TMEM88BA6NKF7 163 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 RASA4BC9J798 803 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 RASA4O43374 803 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 LPIN1Q14693 890 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 BBS9Q3SYG4 887 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 FAM26DQ5JW98 314 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 GKAP1Q5VSY0 366 aaPredicted RBP19.37■□□□□ 0.69
SNTB1-203ENST00000519177 C6orf89Q6UWU4 347 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 CAPN12Q6ZSI9 719 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 YTHDF3Q7Z739 585 aaKnown RBP19.37■□□□□ 0.69
SNTB1-203ENST00000519177 FAM131BQ86XD5 332 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 PCED1BQ96HM7 432 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 SEC16BQ96JE7 1060 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 SMOQ99835 787 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 MAGEB5Q9BZ81 275 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 POPDC2Q9HBU9 364 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 SENP1Q9P0U3 644 aa19.37■□□□□ 0.69
SNTB1-203ENST00000519177 TIMM13Q9Y5L4 95 aaPredicted RBP19.37■□□□□ 0.69
SNTB1-203ENST00000519177 AP1G2O75843 785 aa19.36■□□□□ 0.69
SNTB1-203ENST00000519177 MYCNP04198 464 aaPredicted RBP19.36■□□□□ 0.69
SNTB1-203ENST00000519177 PAX3P23760 479 aa19.36■□□□□ 0.69
SNTB1-203ENST00000519177 PCSK1P29120 753 aa19.36■□□□□ 0.69
SNTB1-203ENST00000519177 ARL4AP40617 200 aa19.36■□□□□ 0.69
SNTB1-203ENST00000519177 GEMIN4P57678 1058 aaKnown RBP19.36■□□□□ 0.69
SNTB1-203ENST00000519177 CAP1Q01518 475 aa19.36■□□□□ 0.69
SNTB1-203ENST00000519177 GBE1Q04446 702 aa19.36■□□□□ 0.69
SNTB1-203ENST00000519177 SLC10A2Q12908 348 aaPredicted RBP19.36■□□□□ 0.69
SNTB1-203ENST00000519177 MPP2Q14168 576 aa19.36■□□□□ 0.69
SNTB1-203ENST00000519177 TIGD5Q53EQ6 642 aa19.36■□□□□ 0.69
SNTB1-203ENST00000519177 RAB41Q5JT25 222 aa19.36■□□□□ 0.69
SNTB1-203ENST00000519177 C3orf62Q6ZUJ4 267 aa19.36■□□□□ 0.69
SNTB1-203ENST00000519177 PALM2Q8IXS6 379 aa19.36■□□□□ 0.69
SNTB1-203ENST00000519177 PGBD4Q96DM1 585 aa19.36■□□□□ 0.69
SNTB1-203ENST00000519177 QKIQ96PU8 341 aaKnown RBP eCLIP19.36■□□□□ 0.692e-7■■■■■ 32.7
SNTB1-203ENST00000519177 KLC2Q9H0B6 622 aa19.36■□□□□ 0.69
SNTB1-203ENST00000519177 ACSS3Q9H6R3 686 aa19.36■□□□□ 0.69
SNTB1-203ENST00000519177 PSMC3IPQ9P2W1 217 aaPredicted RBP19.36■□□□□ 0.69
SNTB1-203ENST00000519177 GCATO75600 419 aa19.35■□□□□ 0.69
SNTB1-203ENST00000519177 ODC1P11926 461 aa19.35■□□□□ 0.69
SNTB1-203ENST00000519177 ATP2A2P16615 1042 aaKnown RBP19.35■□□□□ 0.69
SNTB1-203ENST00000519177 SSTR1P30872 391 aa19.35■□□□□ 0.69
SNTB1-203ENST00000519177 DAOAP59103 153 aa19.35■□□□□ 0.69
SNTB1-203ENST00000519177 TRIM71Q2Q1W2 868 aaKnown RBP19.35■□□□□ 0.69
SNTB1-203ENST00000519177 KLHL38Q2WGJ6 581 aa19.35■□□□□ 0.69
SNTB1-203ENST00000519177 NCBP2-AS2Q69YL0 99 aa19.35■□□□□ 0.69
SNTB1-203ENST00000519177 CACNA2D3Q8IZS8 1091 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms