RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 TTC9BQ8N6N2 239 aa12.9□□□□□ -0.34
SPIDR-209ENST00000519141 SLC7A14Q8TBB6 771 aa12.9□□□□□ -0.34
SPIDR-209ENST00000519141 ATG4AQ8WYN0 398 aa12.9□□□□□ -0.34
SPIDR-209ENST00000519141 SEPT5Q99719 369 aaPredicted RBP12.9□□□□□ -0.34
SPIDR-209ENST00000519141 ZBED2Q9BTP6 218 aa12.9□□□□□ -0.34
SPIDR-209ENST00000519141 DCLK3Q9C098 648 aa12.9□□□□□ -0.34
SPIDR-209ENST00000519141 RAB17Q9H0T7 212 aa12.9□□□□□ -0.34
SPIDR-209ENST00000519141 FBXO44Q9H4M3 255 aa12.9□□□□□ -0.34
SPIDR-209ENST00000519141 EPB41L5Q9HCM4 733 aa12.9□□□□□ -0.34
SPIDR-209ENST00000519141 ARFGAP3Q9NP61 516 aa12.9□□□□□ -0.34
SPIDR-209ENST00000519141 GPATCH2LQ9NWQ4 482 aa12.9□□□□□ -0.34
SPIDR-209ENST00000519141 AP4E1Q9UPM8 1137 aa12.9□□□□□ -0.34
SPIDR-209ENST00000519141 MYO9BQ13459 2157 aa12.9□□□□□ -0.34
SPIDR-209ENST00000519141 ZNF638Q14966 1978 aaKnown RBP12.9□□□□□ -0.34
SPIDR-209ENST00000519141 SYNJ2BP-COX16A0A087WUM0 186 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 C2CD2LO14523 706 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 URODP06132 367 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 CD48P09326 243 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 OR1D2P34982 312 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 GPR15P49685 360 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 ATXN1P54253 815 aaKnown RBP12.89□□□□□ -0.35
SPIDR-209ENST00000519141 YWHAGP61981 247 aaKnown RBP eCLIP12.89□□□□□ -0.35
SPIDR-209ENST00000519141 PITX1P78337 314 aaPredicted RBP12.89□□□□□ -0.35
SPIDR-209ENST00000519141 HTRA4P83105 476 aaPredicted RBP12.89□□□□□ -0.35
SPIDR-209ENST00000519141 NME3Q13232 169 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 DPYSL3Q14195 570 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 CCNG2Q16589 344 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 TMEM240Q5SV17 173 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 C9orf50Q5SZB4 431 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 SDHAF4Q5VUM1 108 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 BBS12Q6ZW61 710 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 BEND5Q7L4P6 421 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 BNIPLQ7Z465 357 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 DDX53Q86TM3 631 aaKnown RBP12.89□□□□□ -0.35
SPIDR-209ENST00000519141 FAM131BQ86XD5 332 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 JAMLQ86YT9 394 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 RFX6Q8HWS3 928 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 HNRNPLLQ8WVV9 542 aaKnown RBP12.89□□□□□ -0.35
SPIDR-209ENST00000519141 EDEM1Q92611 657 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 HINFPQ9BQA5 517 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 FAM204AQ9H8W3 233 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 PCDH18Q9HCL0 1135 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 GDF3Q9NR23 364 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 COX16Q9P0S2 106 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 R3HDM2Q9Y2K5 976 aaKnown RBP12.89□□□□□ -0.35
SPIDR-209ENST00000519141 UTP11Q9Y3A2 253 aaKnown RBP12.89□□□□□ -0.35
SPIDR-209ENST00000519141 PCDHB12Q9Y5F1 795 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 GREB1Q4ZG55 1949 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 WDR27A2RRH5 827 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 ZSCAN5CA6NGD5 496 aaPredicted RBP12.89□□□□□ -0.35
SPIDR-209ENST00000519141 RTN3O95197 1032 aaPredicted RBP12.89□□□□□ -0.35
SPIDR-209ENST00000519141 VNN2O95498 520 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 ECEL1O95672 775 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 HAPLN1P10915 354 aaPredicted RBP12.89□□□□□ -0.35
SPIDR-209ENST00000519141 RPL17P18621 184 aaKnown RBP12.89□□□□□ -0.35
SPIDR-209ENST00000519141 ARSEP51690 589 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 EPHB4P54760 987 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 RPL10AP62906 217 aaKnown RBP12.89□□□□□ -0.35
SPIDR-209ENST00000519141 DYNLT1P63172 113 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 RBM10P98175 930 aaKnown RBP12.89□□□□□ -0.35
SPIDR-209ENST00000519141 DSG1Q02413 1049 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 ADCY2Q08462 1091 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 SNX1Q13596 522 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 TFDP2Q14188 446 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 ZC3H12AQ5D1E8 599 aaKnown RBP12.89□□□□□ -0.35
SPIDR-209ENST00000519141 BTBD8Q5XKL5 378 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 GPR153Q6NV75 609 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 CCNI2Q6ZMN8 369 aaPredicted RBP12.89□□□□□ -0.35
SPIDR-209ENST00000519141 SND1Q7KZF4 910 aaKnown RBP eCLIP12.89□□□□□ -0.35
SPIDR-209ENST00000519141 VSIG1Q86XK7 387 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 PSTKQ8IV42 348 aaKnown RBP12.89□□□□□ -0.35
SPIDR-209ENST00000519141 CCDC185Q8N715 623 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 TTC13Q8NBP0 860 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.89□□□□□ -0.35
SPIDR-209ENST00000519141 GRK7Q8WTQ7 553 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 PGAP3Q96FM1 320 aaPredicted RBP12.89□□□□□ -0.35
SPIDR-209ENST00000519141 SLC9A7Q96T83 725 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 ZNF670Q9BS34 389 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 TRIM51Q9BSJ1 452 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 MAK16Q9BXY0 300 aaKnown RBP12.89□□□□□ -0.35
SPIDR-209ENST00000519141 DHX35Q9H5Z1 703 aaKnown RBP12.89□□□□□ -0.35
SPIDR-209ENST00000519141 ABCC13Q9NSE7 274 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 DDIT4Q9NX09 232 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 CXXC1Q9P0U4 656 aaPredicted RBP12.89□□□□□ -0.35
SPIDR-209ENST00000519141 CALCOCO1Q9P1Z2 691 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 STK39Q9UEW8 545 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 FEZ2Q9UHY8 353 aaPredicted RBP12.89□□□□□ -0.35
SPIDR-209ENST00000519141 SCML2Q9UQR0 700 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 SLC27A5Q9Y2P5 690 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 INSL6Q9Y581 213 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 SLC4A7Q9Y6M7 1214 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 CHD7Q9P2D1 2997 aa12.89□□□□□ -0.35
SPIDR-209ENST00000519141 ESYT3A0FGR9 886 aa12.88□□□□□ -0.35
SPIDR-209ENST00000519141 ZNF487B1APH4 448 aa12.88□□□□□ -0.35
SPIDR-209ENST00000519141 ADAM12O43184 909 aa12.88□□□□□ -0.35
SPIDR-209ENST00000519141 CST8O60676 142 aa12.88□□□□□ -0.35
SPIDR-209ENST00000519141 SOAT2O75908 522 aa12.88□□□□□ -0.35
SPIDR-209ENST00000519141 GAS8O95995 478 aa12.88□□□□□ -0.35
SPIDR-209ENST00000519141 F9P00740 461 aa12.88□□□□□ -0.35
SPIDR-209ENST00000519141 PTGIRP43119 386 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms