RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 SLC26A4O43511 780 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 BMP15O95972 392 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 SNHG28P0DPA3 235 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 PDHBP11177 359 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 TOP1P11387 765 aaKnown RBP5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 IGFBP6P24592 240 aaPredicted RBP5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 CALML3P27482 149 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 KIR2DL3P43628 341 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 ALDH1A3P47895 512 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 CREMQ03060 361 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 LRMPQ12912 555 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 GRM1Q13255 1194 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 POSTNQ15063 836 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 PCOLCEQ15113 449 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 SLC15A2Q16348 729 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 SHROOM1Q2M3G4 852 aaPredicted RBP5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 ARL13BQ3SXY8 428 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 PRAMEF14Q5SWL7 426 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 NT5DC1Q5TFE4 455 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 TRIM68Q6AZZ1 485 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 LARP4Q71RC2 724 aaKnown RBP eCLIP5.29□□□□□ -1.561e-6■■□□□ 13.8
CTNNA1-212ENST00000518919 PDZD4Q76G19 769 aaPredicted RBP5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 IGDCC3Q8IVU1 814 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 ZFPM1Q8IX07 1006 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 BLIDQ8IZY5 108 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 ZNF444Q8N0Y2 327 aaPredicted RBP5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 TXLNBQ8N3L3 684 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 ATP11CQ8NB49 1132 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 CNNM3Q8NE01 707 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 OR10H5Q8NGA6 315 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 ZSCAN18Q8TBC5 510 aaPredicted RBP5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 MDM1Q8TC05 714 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 STON2Q8WXE9 905 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 TEKT1Q969V4 418 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 SLC7A6OSQ96CW6 309 aaPredicted RBP5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 NMD3Q96D46 503 aaKnown RBP5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 EPSTI1Q96J88 318 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 TRIM5Q9C035 493 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 KIAA1683Q9H0B3 1180 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 C11orf54Q9H0W9 315 aaPredicted RBP5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 ADAM7Q9H2U9 754 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 EPB41L4BQ9H329 900 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 USP40Q9NVE5 1235 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 SIDT1Q9NXL6 827 aaKnown RBP5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 BARHL2Q9NY43 387 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 MTMR4Q9NYA4 1195 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 NRBP1Q9UHY1 535 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 STX8Q9UNK0 236 aa5.29□□□□□ -1.56
CTNNA1-212ENST00000518919 COL2A1P02458 1487 aaPredicted RBP5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 ESYT2A0FGR8 921 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 C2orf78A6NCI8 922 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 TRIM43BA6NCK2 446 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 YDJCA8MPS7 323 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 BECN2A8MW95 431 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 KLRF2D3W0D1 207 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 H0YIN7 160 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 POLR2DO15514 142 aaKnown RBP5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 MTSS1O43312 755 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 TBC1D4O60343 1298 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 PEX10O60683 326 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 TOX4O94842 621 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 KLHL18O94889 574 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 MATN4O95460 622 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 TPM3P06753 285 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 THP07101 528 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 RAP2AP10114 183 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 ATP1A3P13637 1013 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 ZNF28P17035 718 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 HDCP19113 662 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 EEF1GP26641 437 aaKnown RBP5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 MCM7P33993 719 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 ALDH9A1P49189 494 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 FLT3LGP49771 235 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 ARFIP2P53365 341 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 EPHB3P54753 998 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 RRADP55042 308 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 SLC13A2Q13183 592 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 SP140Q13342 867 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 SLC44A4Q53GD3 710 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 EMC10Q5UCC4 262 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 STRIP1Q5VSL9 837 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 ISM2Q6H9L7 571 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 MMS22LQ6ZRQ5 1243 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 BEND5Q7L4P6 421 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 CCDC186Q7Z3E2 898 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 ZNF572Q7Z3I7 529 aaPredicted RBP5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 PLXDC1Q8IUK5 500 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 REXO1L1PQ8IX06 675 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 PDILTQ8N807 584 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 GIMAP8Q8ND71 665 aaPredicted RBP5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 NUDT10Q8NFP7 164 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 CCDC148Q8NFR7 591 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 SPATA20Q8TB22 786 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 KIAA1524Q8TCG1 905 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 LRRC15Q8TF66 581 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 CACTINQ8WUQ7 758 aaKnown RBP5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 MAML1Q92585 1016 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 LPPQ93052 612 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 MUL1Q969V5 352 aa5.28□□□□□ -1.56
CTNNA1-212ENST00000518919 TRIM43Q96BQ3 446 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms